CK934576

Overview
NameCK934576
Unique NameCK934576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.719e-26
Identity = 72/192 (37.50%), Postives = 104/192 (54.17%), Query Frame = 3
Query:  144 QDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            QD CVA N P      +G  C+      A DF+   L +PG            A V+Q P +N LGISA R+D  P G  P H HP  +++  VL+G L  GF++S   +N +  K ++KG +FVFP+GL+HFQ+N G T A A++A +S  PG + I D    AN ++   ++ K   L    V+ L++KF
Sbjct:   29 QDFCVA-NLPLGADTPSGYQCRPAATVTAADFYSGALARPGILIRPFNTSLASAFVQQYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSS--DNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPG-LQILDYALFAN-NLPTSYVVKGTFLAEAEVRRLKSKF 215          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL31_ORYSJ (Germin-like protein 3-1 OS=Oryza sativa subsp. japonica GN=Os03g0179000 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.269e-25
Identity = 79/201 (39.30%), Postives = 108/201 (53.73%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKD--GVF-VNGKFCKDPKLARAEDFFFSGLGKPGNTANRL-GVDET-DANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFV-TSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIG-KTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQ 710
            DP  L D CVA        G F +NG  C DP LARA+ F  S L +  N A  L G + T  +    +PG N  G++  RID AP G  PPH HPRA++  LVL G++ VGF  TS++    L  ++L  G+ FVFPR ++HF +N+     A   S LNSQ PG   +  + F   P +  + L KAF +  + V+ +Q
Sbjct:   23 DPDLLFDYCVADTAAATAAGAFHLNGLACIDPALARADHFATSALSRATNPAATLYGFNATLTSPAASLPGANAQGLAMARIDLAPGGMAPPHSHPRASEAALVLSGSVLVGFADTSYR----LYTQLLRAGEAFVFPRAMVHFLYNMDTAAPAVVLSGLNSQSPGAQLVPFSAFRTEPRLPDEVLKKAFKITGQDVQRIQ 219          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.965e-24
Identity = 66/162 (40.74%), Postives = 94/162 (58.02%), Query Frame = 3
Query:  228 AEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQN 713
            A DF + GL   GNT+N +    T A V Q PG+N LGISA R+D A  G  P H HP A+++  V +GT+  GF+TS   +NT+  + L  GD+ VFP+GL+H+Q+N G++ A A  A +   PG + I D    AN ++    + K   LD   VK L++
Sbjct:   50 AGDFAYHGLAAAGNTSNLIKAAVTPAFVGQFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSS--SNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPG-LQITDYALFAN-NLPSAIVEKVTFLDDAQVKKLKS 207          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22
Identity = 65/155 (41.94%), Postives = 84/155 (54.19%), Query Frame = 3
Query:  141 LQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPG 605
            + D CVA N P      +G  CK+     A DF +SGL KPGNT N +    T A V Q PG+  LG++  R+D AP G  P H HP A++I  V+EGT+   F++S    N +  K L  GDV VFP+GL+ FQ   GK  A     L  + PG
Sbjct:   24 VNDFCVA-NGPGARDTPSGFVCKNTAKVTAADFVYSGLAKPGNTTNIINAAVTPAFVGQFPGVIGLGVTLARLDLAPGGVIPMHTHPGASEILNVVEGTILAAFISS---GNKVYEKALYPGDVMVFPQGLLDFQEITGKI-APGLCELRQRNPG 173          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.477e-21
Identity = 64/161 (39.75%), Postives = 89/161 (55.28%), Query Frame = 3
Query:  234 DFF-FSGLGKPGNTANRLGVDE---TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLD-PKIVK 701
            DFF F+G  K  NT++    +    T A + + P LN   +S   + + P    PPH HPR+ ++ LV++G L VGF+ +    N L  + L  GD+FVFP+G++HFQFN G   A A SA  S  PG V +  TVFG    I+   L K+F  D P I+K
Sbjct:   48 DFFTFTGFRKVFNTSSAPEPNSFTVTKATMAEFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAPGVVPVPVTVFGT--GIDDAVLAKSFKTDVPTILK 203          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.577e-20
Identity = 55/138 (39.86%), Postives = 78/138 (56.52%), Query Frame = 3
Query:  297 TDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQ 710
            T A + + P LN   +S   + Y P    PPH HPR+ ++ L+++G L VGFV +    N L  + L  GD+FVFP+G++HFQFN G   A A SA  S   G V++  TVFG N  I+   L K+F  D   ++ L+
Sbjct:   73 TKATMAEFPALNGQSVSYAVLMYPPATLNPPHTHPRSAELLLLVDGALSVGFVDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAAGLVSVPVTVFGTN--IDDAVLAKSFKTDVPTIQKLK 205          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL91_ORYSJ (Germin-like protein 9-1 OS=Oryza sativa subsp. japonica GN=Os09g0568500 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.151e-18
Identity = 53/150 (35.33%), Postives = 83/150 (55.33%), Query Frame = 3
Query:  264 GNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIG-KTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQ 710
            GN+ +   +  T A   + P L    +S   + +      PPHIHPRA+++ +V++G L VG V + + N T+  + L  GD+FVFP+G++HFQFN G    A A+SA  S  PG +++   +FG+   I+   L K+ H D   V  L+
Sbjct:   58 GNSGDPAKLTVTKATHAEFPALLGQSVSYAALVFGAGTVNPPHIHPRASELLVVVQGPLLVGLVDAAR-NGTVYTQTLQTGDMFVFPKGMVHFQFNNGTDVVARAFSAFGSATPGTISLPAALFGS--GIDDTILDKSMHTDQATVDQLK 204          
The following BLAST results are available for this feature:
BLAST of CK934576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL813_ORYSJ9.719e-2637.50Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]
GL31_ORYSJ1.269e-2539.30Germin-like protein 3-1 OS=Oryza sativa subsp. jap... [more]
GL814_ORYSJ6.965e-2440.74Germin-like protein 8-14 OS=Oryza sativa subsp. ja... [more]
GLP1_IPONI2.241e-2241.94Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=... [more]
GL92_ORYSJ2.477e-2139.75Putative germin-like protein 9-2 OS=Oryza sativa s... [more]
GL93_ORYSJ3.577e-2039.86Germin-like protein 9-3 OS=Oryza sativa subsp. jap... [more]
GL91_ORYSJ1.151e-1835.33Germin-like protein 9-1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934576 ID=CK934576; Name=CK934576; organism=Citrus sinensis; type=EST; length=722bp
GGGGAAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGAC
TTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGC
TTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATG
TCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAG
TTCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGG
GCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAG
ATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCA
TTCCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCC
CCGTGCCACCAAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTT
TTGTGACATCACACCAACTGAATAACACACTCATCGCAAAAGTTCTAAAT
AAGGGAGATGTTTTTGTGTTTCCACGAGGTTTGATTCACTTCCAATTCAA
CATTGGAAAAACAAATGCATCTGCCTATTCTGCTCTAAACAGCCAATTCC
CGGGTGAAGTTACCATAGCCGACACAGTCTTTGGAGCCAATCCTTCAATC
AATCCCGATTTTCTTGGCAAGGCATTCCACTTGGACCCAAAGATAGTGAA
AGATCTTCAAAATAAGTTCATT
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