CK934580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_TETNG (NADH-ubiquinone oxidoreductase chain 3 OS=Tetraodon nigroviridis GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 39/117 (33.33%), Postives = 70/117 (59.83%), Query Frame = 2 Query: 227 DIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVF--IEAFIFMLILIVGLVYAWRKGALEWS 565 ++ L I++++ ++ ++S L + +KLS YE G +P+G A L F IR+++ A++F++FD+E L PW D L P+F + A +++L +GL+Y W +G LEW+ Sbjct: 2 NLLLTILFITTILSLILAIVSFWLPLMTPDYQKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWG---DQLPSPMFTLLWASALLIMLTLGLIYEWLQGGLEWA 115
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_RABIT (NADH-ubiquinone oxidoreductase chain 3 OS=Oryctolagus cuniculus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 41/108 (37.96%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 245 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 562 L+I++ I ++ I+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L PWA F+ L + V I A + + IL +GL Y W + LEW Sbjct: 7 LLINTTISLVLVTIAFWLPQLNIYSEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAAQFNNLNL-VLIMALMLISILALGLAYEWIQKGLEW 113
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_PAROL (NADH-ubiquinone oxidoreductase chain 3 OS=Paralichthys olivaceus GN=MT-ND3 PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 40/116 (34.48%), Postives = 67/116 (57.76%), Query Frame = 2 Query: 230 IFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPV--FIEAFIFMLILIVGLVYAWRKGALEWS 565 + + I++++ + ++S L I+ EKLS YE G +PMG A L F +R+++ A++F++FD+E L PW D L P+ F A + +L +GL+Y W +G LEW+ Sbjct: 3 LLMTIITITALLSTILAIVSFWLPQISPDHEKLSPYECGFDPMGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWG---DQLPTPLLTFTWATAVLFLLTLGLIYEWIQGGLEWA 115
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_MYTED (NADH-ubiquinone oxidoreductase chain 3 OS=Mytilus edulis GN=ND3 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.848e-13 Identity = 41/85 (48.24%), Postives = 56/85 (65.88%), Query Frame = 2 Query: 320 EKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSF----DVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 562 EK S YE G EP+G A F IR+++ A++FVVFDVE V L P+A F VLG+ + + F+LIL VGL + +R+G+LEW Sbjct: 33 EKCSPYECGFEPIGSARSPFSIRFFLVAVLFVVFDVEVVLLMPFAYMFFYGKSVLGI---LSSSGFLLILFVGLYHEYREGSLEW 114
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NUOA_BUCAI (NADH-quinone oxidoreductase subunit A OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=nuoA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = 2 Query: 221 KYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 +Y F+ F+ S + +S +L + K + +ESGI G+ L F +++Y+ A+ FVVFDVE ++LY W++S G F EA +F + L++GL Y R AL WS Sbjct: 10 EYLSFFMFIFFSLGLCFFMLCLSWILGGRSSSRYKNTPFESGIVSSGNTNLYFSVKFYLIAMFFVVFDVEALYLYAWSVSIKESGWIGFSEALMFGISLLLGLFYLVRIRALNWS 124
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_CYPCA (NADH-ubiquinone oxidoreductase chain 3 OS=Cyprinus carpio GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.414e-13 Identity = 40/117 (34.19%), Postives = 66/117 (56.41%), Query Frame = 2 Query: 227 DIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVP--VFIEAFIFMLILIVGLVYAWRKGALEWS 565 ++ L I+ + ++ +S L +N EKLS YE G +P+G A L F +R+++ A++F++FD+E L PW D L P F A +++L +GL+Y W +G LEW+ Sbjct: 2 NLIMTILTITVALSLILATVSFWLPQMNPDAEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWG---DQLHNPTGTFFWATTVLILLTLGLIYEWTQGGLEWA 115
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NUOA_PSYWF (NADH-quinone oxidoreductase subunit A OS=Psychrobacter sp. (strain PRwf-1) GN=nuoA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13 Identity = 35/109 (32.11%), Postives = 68/109 (62.39%), Query Frame = 2 Query: 239 AFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 AF++ + + I ++ +L ++G EK +ESG+ G+A ++ ++Y+ A+ FV+FD+E ++LY +++S +G + A IF++ L++GL+YA GAL W+ Sbjct: 11 AFILAAIGLVIFMLVVPRLLGGRSQGTEKEEVFESGVVGAGNARIRLSAKFYLVAIFFVIFDLEALYLYAYSVSVREVGWIGYATALIFVVDLLIGLIYALSLGALNWA 119
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_DASNO (NADH-ubiquinone oxidoreductase chain 3 OS=Dasypus novemcinctus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13 Identity = 39/109 (35.78%), Postives = 62/109 (56.88%), Query Frame = 2 Query: 245 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 L I+ + L LI+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L PWA + + P+ A + +L+L +GL Y W + LEW+ Sbjct: 7 LFINMSLASLLVLIAFWLPQLNTYTEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWATQANTM-TPMLTTALVLILLLALGLAYEWLQKGLEWN 114
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NUOA_BUCBP (NADH-quinone oxidoreductase subunit A OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=nuoA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.377e-13 Identity = 40/114 (35.09%), Postives = 62/114 (54.39%), Query Frame = 2 Query: 221 KYDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 562 +Y F+ F I+ I + IS +L + K + +ESGI P + +++Y+ A+ FV+FDVE ++LY W++S G FIEA IF+L L+ GL+Y L W Sbjct: 10 QYWAFFTFFFIAVSICVFMLSISWILGGRSSSRYKNTPFESGIVPTNTTNMYCSVKFYLVAIYFVLFDVEALYLYAWSVSIVECGWIGFIEALIFILFLLSGLIYLISSKLLVW 123
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_ALLMA (NADH-ubiquinone oxidoreductase chain 3 OS=Allomyces macrogynus GN=ND3 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.377e-13 Identity = 33/108 (30.56%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 233 FWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGAL 556 + +++ + V+ + L+S +L+ EK+S+YE G P+GDA +F + +Y+ A++F++FD+E VF+ P+A + + IF++IL +G +Y + GA+ Sbjct: 3 YLVYIVFTIVLTVGLILVSYLLSQAQPDSEKVSAYECGFSPLGDARQKFDVSFYLIAILFIIFDLEVVFILPFASVIHNVSLLGGWITIIFLVILTIGFIYEFVSGAI 110 The following BLAST results are available for this feature:
BLAST of CK934580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934580 ID=CK934580; Name=CK934580; organism=Citrus sinensis; type=EST; length=618bpback to top |