CK934580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_ONCMA (NADH-ubiquinone oxidoreductase chain 3 OS=Oncorhynchus masou GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 42/112 (37.50%), Postives = 64/112 (57.14%), Query Frame = 2 Query: 248 IISSVIPILAFL--ISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVP--VFIEAFIFMLILIVGLVYAWRKGALEWS 565 II+ I + A L IS L I+ EKLS YE G +P+G A L F +R+++ A++F++FD+E L PW D L P + + + +L +GL+Y W +G LEW+ Sbjct: 7 IITITITLSAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWG---DQLNTPALTLVWSTAVLALLTLGLIYEWTQGGLEWA 115
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_NELNE (NADH-ubiquinone oxidoreductase chain 3 OS=Nelsonia neotomodon GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 36/109 (33.03%), Postives = 63/109 (57.80%), Query Frame = 2 Query: 245 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 ++I++ + + LI+ L +N EK + YE G +PM A L F +++++ A+ F++FD+E L PWAM + + + AFI + +L +GL Y W + LEW+ Sbjct: 7 MLINTTLSFVLILIAFWLPQLNIYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPMPWAMQTQDIKT-MTLTAFILLSVLALGLAYEWTQKGLEWT 114
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_DROME (NADH-ubiquinone oxidoreductase chain 3 OS=Drosophila melanogaster GN=mt:ND3 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 35/115 (30.43%), Postives = 63/115 (54.78%), Query Frame = 2 Query: 224 YDIFWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVF-IEAFIFMLILIVGLVYAWRKGALEWS 565 + I + L+I + I+ FL S + EK S +E G +P + L F +R+++ ++F++FDVE + P + + ++ I + IF+LIL++GL + W +G L WS Sbjct: 2 FSIIFIALLILLITTIVMFLASILSKKALIDREKSSPFECGFDPKSSSRLPFSLRFFLITIIFLIFDVEIALILPMIIIMKYSNIMIWTITSIIFILILLIGLYHEWNQGMLNWS 116
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_CHICK (NADH-ubiquinone oxidoreductase chain 3 OS=Gallus gallus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.669e-12 Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = 2 Query: 272 LAFLISAVLAPIN-------KGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 L+FL+SA L +N EKLS YE G +P+G A L F IR+++ A++F++FD+E L PWA+ + A + +L GL+Y W +G LEW+ Sbjct: 10 LSFLLSAALTTMNFWLAQMAPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQL-AHPMMTLTWATTIIALLTFGLIYEWTQGGLEWA 115
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_SALSA (NADH-ubiquinone oxidoreductase chain 3 OS=Salmo salar GN=MT-ND3 PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 2 Query: 248 IISSVIPILAFLISAVLAPIN-------KGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAF--IFMLILIVGLVYAWRKGALEWS 565 +I+++I I +SAVLA I+ EKLS YE G +P+G A L F +R+++ A++F++FD+E L PW D L P A+ + +L +GL+Y W +G LEW+ Sbjct: 3 LITTIIAI-TITLSAVLATISFWLPQMTPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWG---DQLTTPALTLAWSAAVLALLTLGLIYEWTQGGLEWA 115
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_ONCNE (NADH-ubiquinone oxidoreductase chain 3 OS=Oncorhynchus nerka GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 42/112 (37.50%), Postives = 64/112 (57.14%), Query Frame = 2 Query: 248 IISSVIPILAFL--ISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVP--VFIEAFIFMLILIVGLVYAWRKGALEWS 565 II+ I + A L IS L I+ EKLS YE G +P+G A L F +R+++ A++F++FD+E L PW D L P + + + +L +GL+Y W +G LEW+ Sbjct: 7 IITITITLSAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWG---DQLNAPTLTLLWSTAVLALLTLGLIYEWTQGGLEWA 115
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_ONCMY (NADH-ubiquinone oxidoreductase chain 3 OS=Oncorhynchus mykiss GN=MT-ND3 PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 2 Query: 248 IISSVIPILAFL--ISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVP--VFIEAFIFMLILIVGLVYAWRKGALEWS 565 II+ I + A L IS L I+ EKLS YE G +P+G A L F +R+++ A++F++FD+E L PW D L P I + + +L +GL+Y W +G LEW+ Sbjct: 7 IITITITLSAVLATISFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWG---DQLHTPTLTLIWSTAVLALLTLGLIYEWTQGGLEWA 115
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_ONCKI (NADH-ubiquinone oxidoreductase chain 3 OS=Oncorhynchus kisutch GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 41/112 (36.61%), Postives = 64/112 (57.14%), Query Frame = 2 Query: 248 IISSVIPILAFL--ISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVP--VFIEAFIFMLILIVGLVYAWRKGALEWS 565 II+ I + A L +S L I+ EKLS YE G +P+G A L F +R+++ A++F++FD+E L PW D L P + + + +L +GL+Y W +G LEW+ Sbjct: 7 IITITITLSAVLATVSFWLPQISPDAEKLSPYECGFDPLGSARLPFSLRFFLIAILFLLFDLEIALLLPLPWG---DQLNTPTLTLVWSTAVLALLTLGLIYEWTQGGLEWA 115
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_ANOGA (NADH-ubiquinone oxidoreductase chain 3 OS=Anopheles gambiae GN=mt:ND3 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.485e-12 Identity = 38/107 (35.51%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 248 IISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVF-IEAFIFMLILIVGLVYAWRKGALEWS 565 II+ V+ +LA L+S EK S +E G +PM + L F +R+++ A++F++FDVE L P M + + I + F+ IL++GL + W +GALEW+ Sbjct: 13 IITIVVMMLATLLSKKTL---LDREKCSPFECGFDPMNSSRLPFSLRFFLIAIIFLIFDVEIALLLPMIMIIKTSNLMNWTITSLFFIFILLIGLYHEWNQGALEWN 116
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_PERSJ (NADH-ubiquinone oxidoreductase chain 3 OS=Peromyscus sejugis GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.552e-12 Identity = 34/109 (31.19%), Postives = 63/109 (57.80%), Query Frame = 2 Query: 245 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 L+++ + +L +++ +N EK + YE G +PMG A L F +++++ A+ F++FD+E L PWA+ + + + AFI + +L +GL Y W + LEW+ Sbjct: 7 LLVNITLSMLLIIVAFWFFQLNLYTEKANPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQMYNTNI-MMLTAFILISVLALGLAYEWLQKGLEWT 114 The following BLAST results are available for this feature:
BLAST of CK934580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934580 ID=CK934580; Name=CK934580; organism=Citrus sinensis; type=EST; length=618bpback to top |