CK934580
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_PERGO (NADH-ubiquinone oxidoreductase chain 3 OS=Peromyscus gossypinus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 32/108 (29.63%), Postives = 60/108 (55.56%), Query Frame = 2 Query: 245 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGV-PVFIEAFIFMLILIVGLVYAWRKGALEWS 565 L+++ + IL ++ L +N EK + YE G +PM A L F +++++ A+ F+++D+E L P + + + + AFI + +L +GL Y W + LEW+ Sbjct: 7 LMVNITLSILLITVAFWLPQLNMYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLYDLEIALLLPLPWAIQMYNTNTMMLTAFILVSVLALGLAYEWTQKGLEWT 114
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_ONYLE (NADH-ubiquinone oxidoreductase chain 3 OS=Onychomys leucogaster GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 34/109 (31.19%), Postives = 62/109 (56.88%), Query Frame = 2 Query: 245 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYP--WAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 L ++ ++ LI+ L +N EK + YE G +PM A L F +++++ A+ F++FD+E L P WA+ + + + + +FI + +L +GL Y W + LEW+ Sbjct: 7 LTVNMMLSTCLILIAFWLPQLNLYTEKANPYECGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPLSWAIQMPNINI-MTLTSFILVSVLALGLAYEWLQKGLEWT 114
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_NEOFL (NADH-ubiquinone oxidoreductase chain 3 OS=Neotoma floridana GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 35/109 (32.11%), Postives = 62/109 (56.88%), Query Frame = 2 Query: 245 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 ++I+ + +L I+ L +N EK + Y+ G +PM A L F +++++ A+ F++FD+E L PWA+ + + + AFI + IL +GL Y W + LEW+ Sbjct: 7 MLINITLSLLLISIAFWLPQLNIYTEKANPYDWGFDPMSSARLPFSMKFFLVAITFLLFDLEIALLLPIPWAIQIHSINT-MMLTAFILVTILALGLAYEWIQKGLEWT 114
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_LEMCA (NADH-ubiquinone oxidoreductase chain 3 OS=Lemur catta GN=MT-ND3 PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 2 Query: 245 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 562 L S + +L I+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L PWA + L + + + A + + IL GL Y W + LEW Sbjct: 7 LTTSITLTLLLVTIAFWLPQLNVYTEKYSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTNNLKLMLTV-ALVLITILAAGLAYEWLQKGLEW 113
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_FELCA (NADH-ubiquinone oxidoreductase chain 3 OS=Felis catus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 37/109 (33.94%), Postives = 60/109 (55.05%), Query Frame = 2 Query: 245 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 L+ ++++ L LI+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L PWA D L + A + + +L L Y W + LEW+ Sbjct: 7 LLTNTLLSTLLVLIAFWLPQLNIYAEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTDKLPT-MLTMALLLISLLAASLAYEWTQKGLEWT 114
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_AVACL (NADH-ubiquinone oxidoreductase chain 3 OS=Avahi cleesei GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.259e-11 Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 2 Query: 245 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEW 562 L+ + +L +I+ L +N EK SSYE G +PMG A L F +++++ A+ F++FD+E L PWA L + + A + + IL GL Y W + LEW Sbjct: 7 LMTDVALALLLVMIAFWLPQLNIYTEKYSSYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTTNLKL-MLTMALLLISILAAGLAYEWSQKGLEW 113
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_SIGOC (NADH-ubiquinone oxidoreductase chain 3 OS=Sigmodon ochrognathus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 34/109 (31.19%), Postives = 60/109 (55.05%), Query Frame = 2 Query: 245 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYP--WAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 L I + + ++ I+ L +N EK YE G +P+ A L F +++++ A+ F++FD+E L P WA+ L + + +FI + +L +GL+Y W LEW+ Sbjct: 7 LFIDASLSLILISIAFWLPQLNIYTEKAGPYECGFDPLSSARLPFSMKFFLVAITFLLFDLEIALLLPLPWAIQIPKLSA-MMVTSFILISVLALGLMYEWMNKGLEWT 114
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_RHIPI (NADH-ubiquinone oxidoreductase chain 3 OS=Rhinolophus pumilus GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 37/113 (32.74%), Postives = 62/113 (54.87%), Query Frame = 2 Query: 233 FWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 F L+ ++++ +L I+ L N EK S YE G +PMG A L F +++++ A+ F++FD+E L PWA + L V + A + + +L + L Y W + LEW+ Sbjct: 3 FMLTLLTNTLLALLLVTIAFWLPQTNVYSEKSSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQANNLEV-MLTTALLLISLLAISLAYEWSQKGLEWT 114
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_HUMAN (NADH-ubiquinone oxidoreductase chain 3 OS=Homo sapiens GN=MT-ND3 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 31/112 (27.68%), Postives = 64/112 (57.14%), Query Frame = 2 Query: 233 FWAFLIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGVPVFI-EAFIFMLILIVGLVYAWRKGALEWS 565 F L+I++++ +L +I+ L +N EK + YE G +PM A + F +++++ A+ F++FD+E L P + +P+ + + + ++IL + L Y W + L+W+ Sbjct: 3 FALILMINTLLALLLMIITFWLPQLNGYMEKSTPYECGFDPMSPARVPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTNLPLMVMSSLLLIIILALSLAYEWLQKGLDWT 114
BLAST of CK934580 vs. ExPASy Swiss-Prot
Match: NU3M_HIPAM (NADH-ubiquinone oxidoreductase chain 3 OS=Hippopotamus amphibius GN=MT-ND3 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.951e-11 Identity = 37/109 (33.94%), Postives = 59/109 (54.13%), Query Frame = 2 Query: 245 LIISSVIPILAFLISAVLAPINKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFL--YPWAMSFDVLGVPVFIEAFIFMLILIVGLVYAWRKGALEWS 565 L+ ++ + L LI+ L +N EK S YE G +PMG A L F +++++ A+ F++FD+E L PWA L + I A + +L + L Y W + LEW+ Sbjct: 7 LLTNTALASLLVLIAFWLPQLNSYAEKTSPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEVALLLPLPWATQTTNLKT-MLIMALTLISLLAISLAYEWTQKGLEWT 114 The following BLAST results are available for this feature:
BLAST of CK934580 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 441
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934580 ID=CK934580; Name=CK934580; organism=Citrus sinensis; type=EST; length=618bpback to top |