CK934594

Overview
NameCK934594
Unique NameCK934594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934594 vs. ExPASy Swiss-Prot
Match: PCP_BOVIN (Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=PRCP PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.334e-15
Identity = 61/208 (29.33%), Postives = 105/208 (50.48%), Query Frame = 1
Query:  187 VMLFVLSMLLSISNGLMPPVTMLNKLSGSTNYLTTNQL-------WFNQTLDHFSPYDHRWFEQRYYELLDHFRSPDGPIFLRICGE-----YTCDGIPSDYLAVLAKKFGAAVVSLEHRYYGKSSPFESLS---TENLKYLSSKQALFDLAIFRQRYQESLNLKLKRGDAENTWFVFGISYPGALSAWFRLKFPHLTCGSLASSAVV 765
            ++L +  +    +N + P +   + L  ST++ +   +       +  Q +DHF     R F+QRY  + D++   DG   L   G      + C+   + ++  +A++  A +V  EHRYYG+S PF + S   + +L +L+++QAL D A   +  + ++      G         G SY G L+AWFR+K+PHL  G+LASSA +
Sbjct:    9 LLLLIAFLTPGAANPVSPSLRAPSSLPWSTSFRSRPTITLKYSIRYIQQKVDHFGFNIDRTFKQRYL-IADNYWKEDGGSILFYTGNEGDIIWFCNN--TGFMWDIAEEMKAMLVFAEHRYYGESLPFGADSFSDSRHLNFLTTEQALADFAKLIRYLKRTIP-----GARNQHVIALGGSYGGMLAAWFRMKYPHLVVGALASSAPI 208          
BLAST of CK934594 vs. ExPASy Swiss-Prot
Match: PCP_HUMAN (Lysosomal Pro-X carboxypeptidase OS=Homo sapiens GN=PRCP PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.686e-15
Identity = 63/208 (30.29%), Postives = 102/208 (49.04%), Query Frame = 1
Query:  187 VMLFVLSMLLSISN-GLMPPVTMLNKLSGSTNYLTT-------NQLWFNQTLDHFSPYDHRWFEQRYYELLDHFRSPDGPIFLRICGE----YTCDGIPSDYLAVLAKKFGAAVVSLEHRYYGKSSPFESLS---TENLKYLSSKQALFDLAIFRQRYQESLNLKLKRGDAENTWFVFGISYPGALSAWFRLKFPHLTCGSLASSAVV 765
            ++L +LS L   +   L P +  L  L   TN  +        + L+F Q +DHF     + F QRY     +++   G I      E    + C+   + ++  +A++  A +V  EHRYYG+S PF   S   + +L +L+S+QAL D A   +  + ++      G         G SY G L+AWFR+K+PH+  G+LA+SA +
Sbjct:    6 LLLLLLSFLAPWATIALRPALRALGSLHLPTNPTSLPAVAKNYSVLYFQQKVDHFGFNTVKTFNQRYLVADKYWKKNGGSILFYTGNEGDIIWFCNN--TGFMWDVAEELKAMLVFAEHRYYGESLPFGDNSFKDSRHLNFLTSEQALADFAELIKHLKRTIP-----GAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPI 206          
BLAST of CK934594 vs. ExPASy Swiss-Prot
Match: PCP_PONAB (Lysosomal Pro-X carboxypeptidase OS=Pongo abelii GN=PRCP PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.267e-14
Identity = 62/208 (29.81%), Postives = 102/208 (49.04%), Query Frame = 1
Query:  187 VMLFVLSMLLSISN-GLMPPVTMLNKLSGSTNYLTT-------NQLWFNQTLDHFSPYDHRWFEQRYYELLDHFRSPDGPIFLRICGE----YTCDGIPSDYLAVLAKKFGAAVVSLEHRYYGKSSPFESLS---TENLKYLSSKQALFDLAIFRQRYQESLNLKLKRGDAENTWFVFGISYPGALSAWFRLKFPHLTCGSLASSAVV 765
            ++L +LS L   +   L P +  L  L   TN  +        + L+F Q +DHF     + F QRY     +++   G I      E    + C+   + ++  +A++  A +V  EHRYYG+S PF   +   + +L +L+S+QAL D A   +  + ++      G         G SY G L+AWFR+K+PH+  G+LA+SA +
Sbjct:    6 LLLLLLSFLAPWTTIALRPALRALGSLHLPTNPTSLPAVAKNYSVLYFQQKVDHFGFNTVKTFNQRYLVADKYWKKNGGSILFYTGNEGDIIWFCNN--TGFMWDVAEELKAMLVFAEHRYYGESLPFGDNTFKDSRHLNFLTSEQALADFAELIKHLKRTIP-----GAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPI 206          
The following BLAST results are available for this feature:
BLAST of CK934594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
PCP_BOVIN3.334e-1529.33Lysosomal Pro-X carboxypeptidase OS=Bos taurus GN=... [more]
PCP_HUMAN5.686e-1530.29Lysosomal Pro-X carboxypeptidase OS=Homo sapiens G... [more]
PCP_PONAB1.267e-1429.81Lysosomal Pro-X carboxypeptidase OS=Pongo abelii G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_C06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934594 ID=CK934594; Name=CK934594; organism=Citrus sinensis; type=EST; length=824bp
GGGGACTGTCCGCTAAGCAATTGGAAGCGATGGCTATGGAACGGAACTAG
CTTCCATCTACAGAAGTAAGTGGGAAACTGGAAACTGGATACAAAACGAA
CACAGACACATCTCGTTCATTCTGCGGTGAGACCAAAAAATAAATAAATG
GAAGCTCCGTCGGTGAAGCCGCCGTCTTGGTCGACGGTCATGTTATTCGT
CTTATCGATGTTATTGAGCATCTCCAATGGGCTAATGCCACCTGTCACGA
TGCTTAACAAATTGTCTGGCAGCACCAATTACTTGACCACCAATCAACTC
TGGTTCAATCAGACTCTCGATCATTTCTCACCTTATGATCACCGTTGGTT
TGAGCAGCGATATTATGAATTACTTGACCACTTTCGATCTCCGGATGGAC
CTATTTTTTTGAGGATTTGTGGTGAATATACTTGCGATGGCATACCAAGT
GATTATCTTGCTGTTCTCGCAAAGAAGTTTGGAGCGGCTGTGGTTTCACT
TGAACATCGTTACTATGGGAAGAGCTCACCATTTGAATCATTATCGACAG
AAAATTTGAAATATCTTTCATCTAAGCAGGCACTCTTTGACTTGGCCATT
TTCCGACAGCGTTATCAGGAATCTTTAAACCTGAAGCTCAAAAGAGGAGA
TGCTGAGAATACGTGGTTTGTTTTTGGTATTTCATATCCTGGAGCCCTTA
GTGCATGGTTTCGTCTCAAATTTCCTCATCTAACGTGTGGAAGTCTTGCA
AGTTCTGCAGTCGTTCAGGCAATTTACAACTTCACTGAATTTGATCAGCA
GATTGGTGTCTCAGCTGGCCCTGA
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