CK934598

Overview
NameCK934598
Unique NameCK934598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3)

HSP 1 Score: 180.259 bits (456), Expect = 1.391e-44
Identity = 101/209 (48.33%), Postives = 134/209 (64.11%), Query Frame = 2
Query:  296 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGAD-IPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            +AKLKV INGFGRIGR  LR   G  +  ++ V +ND     N ++LLKYDS  G  ++ V+  D + I +DG  I  VS R+P +LPW +LG D V+E TG+F D  GA KH+QAGA++VII+AP K  D + T +VGVN   +D     IVSNASCTTNCLAP  KV+++  G+ +G +TT H+ T  Q  +D  S +D R  R AA
Sbjct:    1 MAKLKVGINGFGRIGRLVLRA--GINNPNIEFVGINDLVPPDNLAYLLKYDSTHGRLRSQVETKD-DGIVIDGHFIPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGARRVIISAPTKDPDRVRTLLVGVNHDLFDPSKDLIVSNASCTTNCLAPIAKVINDNFGLTEGLMTTVHAMTATQPTVDGPSKKDWRGGRGAA 206          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P_DEBHA (Glyceraldehyde-3-phosphate dehydrogenase OS=Debaryomyces hansenii GN=GPD PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.372e-44
Identity = 101/206 (49.03%), Postives = 134/206 (65.05%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            + + INGFGRIGR  LR    R D  + VV VND     + A+++ KYDS  G +K +V   D+  + +DG+ IKV   +DP  +PW + G+D VIE TGVF    GA KHI  GAKKVIITAP+  +D P +VVGVNE+ Y  ++  IVSNASCTTNCLAP  KV++++ GI +G +TT HS T  Q+ +D  SH+D R  R A+
Sbjct:    3 ITIGINGFGRIGRLVLRIALQRSD--IKVVAVNDPFIAPEYAAYMFKYDSTHGRYKGEVTSKDDSLV-IDGQSIKVFGEKDPASIPWGKAGVDYVIESTGVFTTTEGAQKHIDGGAKKVIITAPS--SDAPMFVVGVNEQKYTPDL-KIVSNASCTTNCLAPLAKVINDKFGIEEGLMTTVHSITATQKTVDGPSHKDWRGGRTAS 202          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P_COLGL (Glyceraldehyde-3-phosphate dehydrogenase OS=Colletotrichum gloeosporioides GN=GPDA PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.098e-44
Identity = 100/209 (47.85%), Postives = 136/209 (65.07%), Query Frame = 2
Query:  296 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            +A +KV INGFGRIGR   R  +  +   +++V VND     K A+++LKYDS  G F  ++K   N+ + ++GK +K  + RDP  +PW E G D V+E TGVF     A  H+Q GAKKVII+AP+  AD P YV+ VNEK YD   A+++SNASCTTNCLAP  KV++++ GIV+G +TT HSYT  Q+ +   S +D R  R AA
Sbjct:    1 MAPIKVGINGFGRIGRIVFR--NAIEHPEVEIVAVNDPFIETKYAAYMLKYDSTHGIFNGEIKQEGNDLV-INGKTVKFYTERDPAAIPWKETGADYVVESTGVFTTTDKAKAHLQGGAKKVIISAPS--ADAPMYVMVVNEKSYDGS-ADVISNASCTTNCLAPLAKVINDKFGIVEGLMTTVHSYTATQKTVHGPSAKDWRGGRTAA 203          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P2_STAES (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.098e-44
Identity = 93/200 (46.50%), Postives = 131/200 (65.50%), Query Frame = 2
Query:  311 VAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDASHRDLRRARA 910
            +AING GRIGR  LR     K+  L+V  +N S   +  +HLL YD+  G +   V+ +++  I V+G  IK++S+R+P  LPW E+ ID+VIE TG F  G  A  HI AGAKKV++T P+KG D+   V GVN+   D +  +I SNASCTTNC+ P  KV++++ GI+ G +TT H+ T DQ+ +D  H+DLRRAR+
Sbjct:    5 IAINGMGRIGRMVLRIALNNKN--LNVKAINASYPPETIAHLLNYDTTHGVYDKKVEPIESG-IKVNGHEIKLLSDRNPENLPWNEMDIDVVIEATGKFNHGDKAVAHINAGAKKVLLTGPSKGGDVQMIVKGVNDNQLDIDTYDIFSNASCTTNCIGPVAKVLNDKFGIINGLMTTVHAITNDQKNIDNPHKDLRRARS 201          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P2_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 3.098e-44
Identity = 93/200 (46.50%), Postives = 131/200 (65.50%), Query Frame = 2
Query:  311 VAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDASHRDLRRARA 910
            +AING GRIGR  LR     K+  L+V  +N S   +  +HLL YD+  G +   V+ +++  I V+G  IK++S+R+P  LPW E+ ID+VIE TG F  G  A  HI AGAKKV++T P+KG D+   V GVN+   D +  +I SNASCTTNC+ P  KV++++ GI+ G +TT H+ T DQ+ +D  H+DLRRAR+
Sbjct:    5 IAINGMGRIGRMVLRIALNNKN--LNVKAINASYPPETIAHLLNYDTTHGVYDKKVEPIESG-IKVNGHEIKLLSDRNPENLPWNEMDIDVVIEATGKFNHGDKAVAHINAGAKKVLLTGPSKGGDVQMIVKGVNDNQLDIDTYDIFSNASCTTNCIGPVAKVLNDKFGIINGLMTTVHAITNDQKNIDNPHKDLRRARS 201          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P_PSEAE (Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudomonas aeruginosa GN=gap PE=3 SV=3)

HSP 1 Score: 178.333 bits (451), Expect = 5.284e-44
Identity = 104/208 (50.00%), Postives = 131/208 (62.98%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWH-GRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVAN----IVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDASHRDLRRARAA 913
            +++AINGFGRIGRN LR  + G     L VV +ND G     +HL +YDS+ G F  +V+  D E++ V G  I V + R+P +LPW  LG+DIV+E TG+F     A  H+QAGA KV+I+AP K  +  T V GVN     HEV      IVSNASCTTNCLAP  +V+  ELGI  G +TT H+YT DQ L D  H DL RAR+A
Sbjct:    3 IRLAINGFGRIGRNVLRALYTGHYREQLQVVAINDLGDAAVNAHLFQYDSVHGHFPGEVEH-DAESLRVMGDRIAVSAIRNPAELPWKSLGVDIVLECTGLFTSRDKAAAHLQAGAGKVLISAPGKDVEA-TVVYGVN-----HEVLRASHRIVSNASCTTNCLAPVAQVLHRELGIEHGLMTTIHAYTNDQNLSDVYHPDLYRARSA 203          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P_PARBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=GPD PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.284e-44
Identity = 96/206 (46.60%), Postives = 132/206 (64.08%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            +KV INGFGRIGR   R  +  +   +++V VND     K A+++LKYDS  G FK D++   +  ++V+ K I     RDP  +PW + G+D V+E TGVF     A  H+  GAKKVII+AP+  AD P +V+GVNEK Y  ++ +++SNASCTTNCLAP  KV+ +  GI +G +TT HSYT  Q+ +D  SH+D R  R AA
Sbjct:    3 VKVGINGFGRIGRIVFR--NAVEHDDVEIVAVNDPFIETKYAAYMLKYDSTHGQFKGDIQHSSSNNLTVNNKTIHFYQERDPANIPWGKHGVDYVVESTGVFTTTEKAKAHLSGGAKKVIISAPS--ADAPMFVMGVNEKSYRPDI-SVLSNASCTTNCLAPLAKVIHDNFGIAEGLMTTIHSYTATQKTVDGPSHKDWRGGRTAA 203          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.284e-44
Identity = 99/206 (48.06%), Postives = 134/206 (65.05%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN-ASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            +KV INGFGRIGR   R  H   D  +++V VND     + A+++LKYDS  G FK DV +  ++ + V GK ++  + RDP  +PW+E G D ++E TGVF     A  H++ GAKKVII+AP+  AD P YV+GVNEK YD     ++SNASCTTNCLAP  KV+++E  I++G +TT HSYT  Q+ +D  S +D R  R AA
Sbjct:    3 VKVGINGFGRIGRIVFRNAHEHSD--VEIVAVNDPFIEPHYAAYMLKYDSQHGNFKGDVTVEGSDLV-VGGKKVRFYTERDPAAIPWSETGADYIVESTGVFTTTEKAKAHLKGGAKKVIISAPS--ADAPMYVMGVNEKTYDGS-GMVISNASCTTNCLAPLAKVINDEFKIIEGLMTTVHSYTATQKTVDGPSAKDWRGGRTAA 202          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.284e-44
Identity = 99/206 (48.06%), Postives = 133/206 (64.56%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            +KV INGFGRIGR   R  +  +   +++V VND       A+++LKYDS  G FK DVK  +N  + VDGK ++    RDP  +PWAE G D VIE TGVF     A  H++ GAKKVII+AP+  AD P +V+GVN + Y  ++  ++SNASCTTNCLAP  KV+++  G+V+G +TT HSYT  Q+ +D  S +D R  R AA
Sbjct:    3 VKVGINGFGRIGRIVFR--NAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFKGDVKFSENG-LDVDGKHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPS--ADAPMFVMGVNNETYKSDI-KVLSNASCTTNCLAPLAKVVNDNFGLVEGLMTTVHSYTATQKTVDGPSSKDWRGGRTAA 202          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P_PODAN (Glyceraldehyde-3-phosphate dehydrogenase OS=Podospora anserina GN=GPD PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.177e-43
Identity = 97/206 (47.09%), Postives = 136/206 (66.02%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            +KV INGFGRIGR   R  +  +   +++V VND     K A ++LKYDS  G FK  +++  ++ I V+GK +K  + RDP  +PW + G + ++E TGVF     A  H++ GAK+VII+AP+  AD P YV+GVNEK YD + A ++SNASCTTNCLAP  KV++++ GIV+G +TT HSYT  Q+ +D  S +D R  R AA
Sbjct:    3 VKVGINGFGRIGRIVFR--NAVEHPDVEIVAVNDPFIEPKYAEYMLKYDSTHGVFKGTIQVSGSDLI-VNGKTVKFYTERDPSAIPWKDTGAEYIVESTGVFTTTEKASAHLKGGAKRVIISAPS--ADAPMYVMGVNEKTYDGKAA-VISNASCTTNCLAPLAKVVNDKFGIVEGLMTTVHSYTATQKTVDGPSAKDWRGGRGAA 202          
The following BLAST results are available for this feature:
BLAST of CK934598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P1_ANASP1.391e-4448.33Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P_DEBHA2.372e-4449.03Glyceraldehyde-3-phosphate dehydrogenase OS=Debary... [more]
G3P_COLGL3.098e-4447.85Glyceraldehyde-3-phosphate dehydrogenase OS=Collet... [more]
G3P2_STAES3.098e-4446.50Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_STAEQ3.098e-4446.50Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P_PSEAE5.284e-4450.00Glyceraldehyde-3-phosphate dehydrogenase OS=Pseudo... [more]
G3P_PARBA5.284e-4446.60Glyceraldehyde-3-phosphate dehydrogenase OS=Paraco... [more]
G3P_CRYPA5.284e-4448.06Glyceraldehyde-3-phosphate dehydrogenase OS=Crypho... [more]
G3P_COCP75.284e-4448.06Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_PODAN1.177e-4347.09Glyceraldehyde-3-phosphate dehydrogenase OS=Podosp... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_B02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934598 ID=CK934598; Name=CK934598; organism=Citrus sinensis; type=EST; length=916bp
GGGGAGCTTTAGAAGTTGCAGCAAATCAGCAACTAAGCCACAGGCCATGG
CCAGTCACTCAGCTCTTGCTCCCTCAAGAATCCCGGCCATCACTAGGATT
CCATCCAAGACTACTCACTCTTTTCCCACTCAATGCTCCACCAAGAGGCT
GGATGTGGCTGAATTCGCTGGCCTTCGAGCAAATGCAGGCGCGACATACG
CCACTGGTGCTAGAGATGCATCCTTCTTTGATGCTGTGACTGCTCAACTT
ACTCCTAAGGTTGCAGCAGGATCAGTTCCTGTAAAGAAAGAAACCGTGGC
CAAATTGAAGGTGGCAATTAATGGATTTGGACGTATTGGCAGGAACTTCC
TCCGATGCTGGCACGGCAGGAAAGACTCACCCCTTGATGTTGTTGTTGTC
AATGACAGTGGTGGTGTCAAGAATGCTTCACACCTTCTAAAATATGACTC
ATTGCTTGGAACTTTTAAAGCAGACGTGAAAATAGTGGACAACGAGACCA
TCTCTGTCGATGGTAAGCTCATCAAGGTTGTCTCTAACAGGGACCCTCTC
CAGCTCCCTTGGGCTGAGCTCGGAATTGACATCGTTATTGAGGGAACAGG
AGTTTTTGTGGACGGCCCTGGTGCTGGAAAGCACATCCAAGCTGGTGCCA
AGAAAGTTATTATCACTGCTCCAGCAAAAGGTGCAGACATTCCAACCTAT
GTCGTTGGAGTTAACGAGAAGGATTACGATCACGAGGTTGCAAACATTGT
GAGCAATGCTTCTTGCACCACAAACTGTTTGGCTCCTTTTGTGAAGGTCA
TGGATGAAGAATTGGGGATTGTCAAGGGAGCGATTACAACNNNTCACTCC
TACACTGGAGACCAGAGGCTCTTGGATGCTTCACACAGGGACTTGAGGAG
AGCGAGAGCTGCAGCG
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