CK934598

Overview
NameCK934598
Unique NameCK934598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3PC_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Trypanosoma brucei brucei PE=1 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 1.177e-43
Identity = 98/205 (47.80%), Postives = 132/205 (64.39%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            ++V INGFGRIGR   R    R D  +++V +ND       +++LKYDS  G F+  V+ V    + V+GK I+V S RDP  L W E+ +D+V+E TG+F+    A KHIQAGAKKV+IT P+K  D P +V+GVN   Y  E   IVSNASCTTNCLAP  KV++++ GIV+G +TT H+ T  Q+ +D  S +D R  R AA
Sbjct:    3 IRVGINGFGRIGRVVFRAAQRRND--IEIVGINDLLDADYMAYMLKYDSTHGRFEGAVE-VQGGALVVNGKKIRVTSERDPANLKWNEINVDVVVESTGLFLSDDTARKHIQAGAKKVVITGPSKD-DTPMFVMGVNHTTYKGEA--IVSNASCTTNCLAPLAKVLNDKFGIVEGLMTTVHATTATQKTVDGPSQKDWRGGRGAA 201          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P1_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MW2) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.177e-43
Identity = 102/206 (49.51%), Postives = 134/206 (65.05%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDASHR--DLRRARAAA 916
            +KVAINGFGRIGR   R    ++   L+VV VND       +HLLKYD++ G F  +V++VD     V+GK +K  S  D  +LPW +L ID+V+E TG + D   A  HI+AGAKKV+I+APA G D+ T V   N ++ D     +VS ASCTTN LAP  KV++++ G+V+G +TT H+YTGDQ   DA HR  D RRARAAA
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATG-DLKTIVFNTNHQELDGS-ETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAA 203          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P1_STAAU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus GN=gapA1 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.177e-43
Identity = 102/206 (49.51%), Postives = 134/206 (65.05%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDASHR--DLRRARAAA 916
            +KVAINGFGRIGR   R    ++   L+VV VND       +HLLKYD++ G F  +V++VD     V+GK +K  S  D  +LPW +L ID+V+E TG + D   A  HI+AGAKKV+I+APA G D+ T V   N ++ D     +VS ASCTTN LAP  KV++++ G+V+G +TT H+YTGDQ   DA HR  D RRARAAA
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATG-DLKTIVFNTNHQELDGS-ETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAA 203          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P1_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MSSA476) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.177e-43
Identity = 102/206 (49.51%), Postives = 134/206 (65.05%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDASHR--DLRRARAAA 916
            +KVAINGFGRIGR   R    ++   L+VV VND       +HLLKYD++ G F  +V++VD     V+GK +K  S  D  +LPW +L ID+V+E TG + D   A  HI+AGAKKV+I+APA G D+ T V   N ++ D     +VS ASCTTN LAP  KV++++ G+V+G +TT H+YTGDQ   DA HR  D RRARAAA
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATG-DLKTIVFNTNHQELDGS-ETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAA 203          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P1_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MRSA252) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.177e-43
Identity = 102/206 (49.51%), Postives = 134/206 (65.05%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDASHR--DLRRARAAA 916
            +KVAINGFGRIGR   R    ++   L+VV VND       +HLLKYD++ G F  +V++VD     V+GK +K  S  D  +LPW +L ID+V+E TG + D   A  HI+AGAKKV+I+APA G D+ T V   N ++ D     +VS ASCTTN LAP  KV++++ G+V+G +TT H+YTGDQ   DA HR  D RRARAAA
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATG-DLKTIVFNTNHQELDGS-ETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAA 203          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P1_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain N315) GN=gapA1 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.177e-43
Identity = 102/206 (49.51%), Postives = 134/206 (65.05%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDASHR--DLRRARAAA 916
            +KVAINGFGRIGR   R    ++   L+VV VND       +HLLKYD++ G F  +V++VD     V+GK +K  S  D  +LPW +L ID+V+E TG + D   A  HI+AGAKKV+I+APA G D+ T V   N ++ D     +VS ASCTTN LAP  KV++++ G+V+G +TT H+YTGDQ   DA HR  D RRARAAA
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATG-DLKTIVFNTNHQELDGS-ETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAA 203          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P1_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA1 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.177e-43
Identity = 102/206 (49.51%), Postives = 134/206 (65.05%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDASHR--DLRRARAAA 916
            +KVAINGFGRIGR   R    ++   L+VV VND       +HLLKYD++ G F  +V++VD     V+GK +K  S  D  +LPW +L ID+V+E TG + D   A  HI+AGAKKV+I+APA G D+ T V   N ++ D     +VS ASCTTN LAP  KV++++ G+V+G +TT H+YTGDQ   DA HR  D RRARAAA
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATG-DLKTIVFNTNHQELDGS-ETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAA 203          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P1_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain COL) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.177e-43
Identity = 102/206 (49.51%), Postives = 134/206 (65.05%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDASHR--DLRRARAAA 916
            +KVAINGFGRIGR   R    ++   L+VV VND       +HLLKYD++ G F  +V++VD     V+GK +K  S  D  +LPW +L ID+V+E TG + D   A  HI+AGAKKV+I+APA G D+ T V   N ++ D     +VS ASCTTN LAP  KV++++ G+V+G +TT H+YTGDQ   DA HR  D RRARAAA
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGG-FRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATG-DLKTIVFNTNHQELDGS-ETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAA 203          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P_PICCI (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia ciferrii GN=GPD PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.537e-43
Identity = 99/206 (48.06%), Postives = 133/206 (64.56%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            + V INGFGRIGR  LR    RKD  + +V +ND     + AS++ KYDS  G +  +V   + E I +DGK I+V   RDP+ +PW + G+D VI+ TGVF +   A KHI AGAKKV+ITAP+  A  P +VVGVNE  Y  ++ NI+SNASCTTNCLAP  K+++ + GI +G +TT HS T  Q+ +D  SH+D R    A+
Sbjct:    3 ITVGINGFGRIGRLVLRIALSRKD--IQIVAINDPFIAPEYASYMFKYDSTHGRYSGEVSH-EGENIVIDGKKIRVYQERDPVNIPWGKDGVDYVIDSTGVFKELDSAQKHIDAGAKKVVITAPSSTA--PMFVVGVNEDKYTPDL-NIISNASCTTNCLAPLAKIINNKFGIEEGLMTTVHSITATQKTVDGPSHKDWRSGPTAS 202          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P2_TRIKO (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Trichoderma koningii GN=gpd2 PE=1 SV=3)

HSP 1 Score: 176.792 bits (447), Expect = 1.537e-43
Identity = 100/209 (47.85%), Postives = 137/209 (65.55%), Query Frame = 2
Query:  296 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            +A +KV INGFGRIGR   R  +  +   ++VV VND       A+++LKYDS  G FK +V+ VD + + V+GK ++  + R+P  + W+E G + V+E TGVF     A  H+  GAKKVII+AP+  AD P YV+GVNE DYD   A+++SNASCTTNCLAP  KV+++  GIV+G +TT HSYT  Q+ +D  S +D R  R AA
Sbjct:    1 MAPIKVGINGFGRIGRIVFR--NAVEHPDIEVVAVNDPFIETTYAAYMLKYDSSHGLFKGEVE-VDGKDLVVNGKKVRFYTERNPADIKWSETGAEYVVESTGVFTTTEKAKAHLVGGAKKVIISAPS--ADAPMYVMGVNESDYDGS-ADVISNASCTTNCLAPLAKVINDNYGIVEGLMTTVHSYTATQKTVDGPSAKDWRGGRGAA 203          
The following BLAST results are available for this feature:
BLAST of CK934598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3PC_TRYBB1.177e-4347.80Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P1_STAAW1.177e-4349.51Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAU1.177e-4349.51Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAS1.177e-4349.51Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAR1.177e-4349.51Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAN1.177e-4349.51Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAM1.177e-4349.51Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P1_STAAC1.177e-4349.51Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap... [more]
G3P_PICCI1.537e-4348.06Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P2_TRIKO1.537e-4347.85Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Tric... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_B02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934598 ID=CK934598; Name=CK934598; organism=Citrus sinensis; type=EST; length=916bp
GGGGAGCTTTAGAAGTTGCAGCAAATCAGCAACTAAGCCACAGGCCATGG
CCAGTCACTCAGCTCTTGCTCCCTCAAGAATCCCGGCCATCACTAGGATT
CCATCCAAGACTACTCACTCTTTTCCCACTCAATGCTCCACCAAGAGGCT
GGATGTGGCTGAATTCGCTGGCCTTCGAGCAAATGCAGGCGCGACATACG
CCACTGGTGCTAGAGATGCATCCTTCTTTGATGCTGTGACTGCTCAACTT
ACTCCTAAGGTTGCAGCAGGATCAGTTCCTGTAAAGAAAGAAACCGTGGC
CAAATTGAAGGTGGCAATTAATGGATTTGGACGTATTGGCAGGAACTTCC
TCCGATGCTGGCACGGCAGGAAAGACTCACCCCTTGATGTTGTTGTTGTC
AATGACAGTGGTGGTGTCAAGAATGCTTCACACCTTCTAAAATATGACTC
ATTGCTTGGAACTTTTAAAGCAGACGTGAAAATAGTGGACAACGAGACCA
TCTCTGTCGATGGTAAGCTCATCAAGGTTGTCTCTAACAGGGACCCTCTC
CAGCTCCCTTGGGCTGAGCTCGGAATTGACATCGTTATTGAGGGAACAGG
AGTTTTTGTGGACGGCCCTGGTGCTGGAAAGCACATCCAAGCTGGTGCCA
AGAAAGTTATTATCACTGCTCCAGCAAAAGGTGCAGACATTCCAACCTAT
GTCGTTGGAGTTAACGAGAAGGATTACGATCACGAGGTTGCAAACATTGT
GAGCAATGCTTCTTGCACCACAAACTGTTTGGCTCCTTTTGTGAAGGTCA
TGGATGAAGAATTGGGGATTGTCAAGGGAGCGATTACAACNNNTCACTCC
TACACTGGAGACCAGAGGCTCTTGGATGCTTCACACAGGGACTTGAGGAG
AGCGAGAGCTGCAGCG
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