CK934598

Overview
NameCK934598
Unique NameCK934598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P_ZYGRO (Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosaccharomyces rouxii PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.842e-43
Identity = 97/206 (47.09%), Postives = 133/206 (64.56%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            + V++NGFGRIGR   R    RKD  +++V +ND       A+++ KYDS  G F  +V   D + I ++GK + V + +DP  LPW +LG+D+ I+ TG+F +   A KHI+AGAKKV+ITAP+  A  P YV+GVNE+ Y  +   IVSNASCTTNCLAP  KV+  E GI +G +TT HS T  Q+ +D  SH+D R  R A+
Sbjct:    2 VNVSVNGFGRIGRLVTRIAISRKD--INLVAINDPFISTDYAAYMFKYDSTHGRFDGEVSH-DKDHIILNGKKVAVFNEKDPAALPWGKLGVDVAIDSTGIFKEMDSANKHIEAGAKKVVITAPSGSA--PMYVMGVNEETYTPD-QKIVSNASCTTNCLAPLAKVIHNEFGIKEGLMTTVHSMTATQKTVDGPSHKDWRGGRTAS 201          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.842e-43
Identity = 97/209 (46.41%), Postives = 137/209 (65.55%), Query Frame = 2
Query:  296 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            +A  KV INGFGRIGR   R  +  +   +D+V VND     + A+++LKYDS  G FK D+K++ ++ + V+GK +K  + RDP  +PWAE     V+E TGVF     A  H++ GAKKV+I+AP+  AD P YV+GVN + Y+ E A+++SNASCTTNCLAP  KV+++E  I++  +TT HSYT  Q+ +D  S +D R  R AA
Sbjct:    1 MAPTKVGINGFGRIGRIVFR--NAIEHDDIDIVAVNDPFIETEYAAYMLKYDSTHGQFKGDIKVL-SDGLEVNGKKVKFYTERDPANIPWAESEAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPS--ADAPMYVMGVNNETYNGE-ADVISNASCTTNCLAPLAKVINDEFTIIESLMTTIHSYTATQKTVDGPSAKDWRGGRTAA 203          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P2_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MRSA252) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 5.842e-43
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 2
Query:  311 VAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDASHRDLRRARA 910
            +AING GRIGR  LR     K+  L+VV +N S   +  +HL+ YD+  G +   V+ ++N  + V    IK+V++R+P  LPW EL IDI I+ TG F  G  A  HI+AGAKKV++T P+KG  +   V GVN+   D E  +I SNASCTTNC+ P  KV++ + GIV G +TT H+ T DQ+ +D  H+DLRRAR+
Sbjct:    5 IAINGMGRIGRMVLRIALQNKN--LNVVAINASYPPETIAHLINYDTTHGKYNLKVEPIENG-LQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDDQLDIEAFDIFSNASCTTNCIGPVAKVLNNQFGIVNGLMTTVHAITNDQKNIDNPHKDLRRARS 201          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3PC_PETHY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida GN=GAPC PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 7.630e-43
Identity = 99/210 (47.14%), Postives = 139/210 (66.19%), Query Frame = 2
Query:  296 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKA-DVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            +AK+K+ INGFGRIGR   R    R D  +++V VND    V+  +++ KYDS+ G +K  ++K  D++T+    K + V   R+P ++PW E G D V+E TGVF D   A  H++ GAKKVII+AP+K  D P +VVGVNEK+Y  ++  +VSNASCTTNCLAP  KV+++  GIV+G +TT HS T  Q+ +D  S +D R  RAA+
Sbjct:    1 MAKIKIGINGFGRIGRLVARVALQRDD--VELVAVNDPFISVEYMTYMFKYDSVHGQWKHHELKAKDDKTLLFGEKPVTVFGIRNPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--DAPMFVVGVNEKEYKSDL-TVVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSMTATQKTVDGPSAKDWRGGRAAS 205          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P_SORMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Sordaria macrospora GN=GPD PE=3 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 9.965e-43
Identity = 96/206 (46.60%), Postives = 131/206 (63.59%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            +KV INGFGRIGR   R  +  +   + +V VND     K A ++L+YDS  G FK  + +  ++ + V+GK +K  + RDP  +PW+E G D ++E TGVF     A  H++ GAKKVII+AP+  AD P YV+GVN + YD   AN++SNASCTTNCLAP  KV+ +   IV+G +TT HSYT  Q+ +D  S +D R  R AA
Sbjct:    3 VKVGINGFGRIGRIVFR--NAIEHDDIQIVAVNDPFIEPKYAEYMLRYDSTHGNFKGTIAVEGSDLV-VNGKKVKFYTERDPSAIPWSETGADYIVESTGVFTTTEKASAHLKGGAKKVIISAPS--ADAPMYVMGVNNESYDGS-ANVISNASCTTNCLAPLAKVIHDNFTIVEGLMTTVHSYTATQKTVDGPSSKDWRGGRTAA 202          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P_BUCAI (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=gapA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.965e-43
Identity = 96/204 (47.06%), Postives = 134/204 (65.69%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLD-ASHRDLRRARAA 913
            +KV INGFGRIGR   R    +K S ++++ +ND    +  +++LKYDS  G FK  +   D + I ++GK I+V S +DP +L W +L ID+VIE TG+F+    A KHI AG+KKV++T P+K  DIP +V G N   Y  E  +IVSNASCTTNCLAP  KV+D+  GI++G +TT H+ T  Q+++D AS +D R  R A
Sbjct:    3 IKVGINGFGRIGRVLFRL--AQKRSDIEIIAINDLLAPEYIAYMLKYDSTHGVFKKHITF-DKDNIIINGKNIRVTSIKDPEKLMWHDLSIDVVIESTGLFLKREQAYKHILAGSKKVVVTGPSKD-DIPMFVRGANFHKYQGE--SIVSNASCTTNCLAPLSKVIDDNFGIIEGLMTTVHASTATQKIVDGASDKDWRGGRGA 200          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3PC_GINBI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.965e-43
Identity = 98/210 (46.67%), Postives = 136/210 (64.76%), Query Frame = 2
Query:  293 TVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKA-DVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAA 913
            +  K+K+ INGFGRIGR   R    R D  +++V VND        +++ KYDS+ G +K  +VK+ D+ T+    K + V   R+P ++PW E G++ V+E TGVF D   A  HI+ GAKKV+ITAP+K  D P +VVGVNE +Y  ++A IVSNASCTTNCLAP  KV+++  GIV+G +TT HS T  Q+ +D  S++D R  R A
Sbjct:    3 STGKIKIGINGFGRIGRLVARVALLRDD--IELVAVNDPFISTDYMTYMFKYDSVHGQWKKHEVKVKDSNTLLFGEKAVTVFGCRNPEEIPWGETGVEYVVESTGVFTDKEKAAAHIKGGAKKVVITAPSK--DAPMFVVGVNEHEYKPDLA-IVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSNKDWRGGRGA 207          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3PC_DIACA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.965e-43
Identity = 100/210 (47.62%), Postives = 136/210 (64.76%), Query Frame = 2
Query:  296 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKA-DVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            +A +K+ INGFGRIGR   R    R+D  L  V VND     +  +++ KYDS+ G +K  D+K+ D +T+    K + V  NR+P ++PW   G D V+E TGVF D   A  H++ GAKKVII+AP+K  D P +VVGVNE +Y  E+ +IVSNASCTTNCLAP  KV+++  GIV+G +TT HS T  Q+ +D  S +D R  RAA+
Sbjct:    1 MAPIKIGINGFGRIGRLVARVILQREDCEL--VAVNDPFITTEYMTYMFKYDSVHGQWKHHDIKVKDEKTLLFGEKAVTVFGNRNPEEIPWGGTGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSK--DAPMFVVGVNEHEYKPEL-DIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSMKDWRGGRAAS 205          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P2_CANGA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Candida glabrata GN=GPD2 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.965e-43
Identity = 104/206 (50.49%), Postives = 132/206 (64.08%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN-ASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            +++AINGFGRIGR  LR    R  S ++VV VND     + A+++ KYDS  G +  +V   D++ I +DGK I V   RDP  LPW    IDI I+ TGVF +   A KHI AGAKKV+ITAP+  A  P +VVGVNE  Y  ++  IVSNASCTTNCLAP  KV+DE  GI +G +TT HS T  Q+ +D  SH+D R  R A+
Sbjct:    2 VRIAINGFGRIGRLVLRVALSR--SNIEVVAVNDPFITTDYAAYMFKYDSTHGRYAGEVTH-DDKHIIIDGKKIAVHQERDPANLPWGSENIDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSSTA--PMFVVGVNEDKYTSDL-KIVSNASCTTNCLAPLAKVIDEAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTAS 201          
BLAST of CK934598 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 9.965e-43
Identity = 95/206 (46.12%), Postives = 129/206 (62.62%), Query Frame = 2
Query:  305 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGAD-IPTYVVGVNEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIVKGAITTXHSYTGDQRLLDA-SHRDLRRARAAA 916
            LK+ INGFGRIGR   R      +  + +V +ND     N ++L KYDS  G++   V +   E I +D + I   S R+P QLPW +LG D V+E TG+F     A  H++AGAK+VII+AP+K  + IPT+VVGVN  +Y+ +   IVSNASCTTNCLAP  K++D+  GIV+G +TT H+ T  Q  +D  S +D R  R AA
Sbjct:    2 LKIGINGFGRIGRLVARI--AMANPQVTLVGINDLVPASNLAYLFKYDSTHGSYGGTV-VAKEEGIVIDDQFIPCFSQRNPAQLPWGDLGADYVVESTGLFTTYATAENHLKAGAKRVIISAPSKDPEKIPTFVVGVNHLNYNADTDKIVSNASCTTNCLAPIAKILDDNFGIVEGLMTTVHAMTATQPTVDGPSKKDFRGGRGAA 204          
The following BLAST results are available for this feature:
BLAST of CK934598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_ZYGRO5.842e-4347.09Glyceraldehyde-3-phosphate dehydrogenase OS=Zygosa... [more]
G3P_SCLSC5.842e-4346.41Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3P2_STAAR5.842e-4346.50Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3PC_PETHY7.630e-4347.14Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_SORMA9.965e-4346.60Glyceraldehyde-3-phosphate dehydrogenase OS=Sordar... [more]
G3P_BUCAI9.965e-4347.06Glyceraldehyde-3-phosphate dehydrogenase OS=Buchne... [more]
G3PC_GINBI9.965e-4346.67Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_DIACA9.965e-4347.62Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P2_CANGA9.965e-4350.49Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Cand... [more]
G3P1_SYNY39.965e-4346.12Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Syne... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_B02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934598 ID=CK934598; Name=CK934598; organism=Citrus sinensis; type=EST; length=916bp
GGGGAGCTTTAGAAGTTGCAGCAAATCAGCAACTAAGCCACAGGCCATGG
CCAGTCACTCAGCTCTTGCTCCCTCAAGAATCCCGGCCATCACTAGGATT
CCATCCAAGACTACTCACTCTTTTCCCACTCAATGCTCCACCAAGAGGCT
GGATGTGGCTGAATTCGCTGGCCTTCGAGCAAATGCAGGCGCGACATACG
CCACTGGTGCTAGAGATGCATCCTTCTTTGATGCTGTGACTGCTCAACTT
ACTCCTAAGGTTGCAGCAGGATCAGTTCCTGTAAAGAAAGAAACCGTGGC
CAAATTGAAGGTGGCAATTAATGGATTTGGACGTATTGGCAGGAACTTCC
TCCGATGCTGGCACGGCAGGAAAGACTCACCCCTTGATGTTGTTGTTGTC
AATGACAGTGGTGGTGTCAAGAATGCTTCACACCTTCTAAAATATGACTC
ATTGCTTGGAACTTTTAAAGCAGACGTGAAAATAGTGGACAACGAGACCA
TCTCTGTCGATGGTAAGCTCATCAAGGTTGTCTCTAACAGGGACCCTCTC
CAGCTCCCTTGGGCTGAGCTCGGAATTGACATCGTTATTGAGGGAACAGG
AGTTTTTGTGGACGGCCCTGGTGCTGGAAAGCACATCCAAGCTGGTGCCA
AGAAAGTTATTATCACTGCTCCAGCAAAAGGTGCAGACATTCCAACCTAT
GTCGTTGGAGTTAACGAGAAGGATTACGATCACGAGGTTGCAAACATTGT
GAGCAATGCTTCTTGCACCACAAACTGTTTGGCTCCTTTTGTGAAGGTCA
TGGATGAAGAATTGGGGATTGTCAAGGGAGCGATTACAACNNNTCACTCC
TACACTGGAGACCAGAGGCTCTTGGATGCTTCACACAGGGACTTGAGGAG
AGCGAGAGCTGCAGCG
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