CK934608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_SACOF (Photosystem II CP47 chlorophyll apoprotein OS=Saccharum officinarum GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 9.144e-140 Identity = 232/256 (90.62%), Postives = 240/256 (93.75%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSI+GGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ+VNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSISGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQAVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_SACHY (Photosystem II CP47 chlorophyll apoprotein OS=Saccharum hybrid GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 9.144e-140 Identity = 232/256 (90.62%), Postives = 240/256 (93.75%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSI+GGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ+VNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSISGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQAVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_POPDE (Photosystem II CP47 chlorophyll apoprotein OS=Populus deltoides GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 9.144e-140 Identity = 231/241 (95.85%), Postives = 235/241 (97.51%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSS 902 MGLPWYRVHTV LNDPGRL+AVH+MHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT SWGGWSITGGT+TNPGIWSYEGVAG+HIVFSGLCFLAAIWHWVYWDL IF DDRTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSS Sbjct: 1 MGLPWYRVHTVELNDPGRLLAVHMMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITKSWGGWSITGGTITNPGIWSYEGVAGSHIVFSGLCFLAAIWHWVYWDLEIFCDDRTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSS 241
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_PHAVU (Photosystem II CP47 chlorophyll apoprotein OS=Phaseolus vulgaris GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 9.144e-140 Identity = 230/256 (89.84%), Postives = 240/256 (93.75%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGW+ITGG +TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTG++QSVNPAWGVEGFDPFVPGG+ASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWNITGGAITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRIQSVNPAWGVEGFDPFVPGGVASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_PANGI (Photosystem II CP47 chlorophyll apoprotein OS=Panax ginseng GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 9.144e-140 Identity = 232/256 (90.62%), Postives = 239/256 (93.36%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWS+TGG + NPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSVTGGAIPNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFSDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_ORYSJ (Photosystem II CP47 chlorophyll apoprotein OS=Oryza sativa subsp. japonica GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 9.144e-140 Identity = 232/256 (90.62%), Postives = 240/256 (93.75%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSI+GGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ+VNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSISGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQAVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_ORYSA (Photosystem II CP47 chlorophyll apoprotein OS=Oryza sativa GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 9.144e-140 Identity = 232/256 (90.62%), Postives = 240/256 (93.75%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSI+GGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ+VNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSISGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQAVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_ORYNI (Photosystem II CP47 chlorophyll apoprotein OS=Oryza nivara GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 9.144e-140 Identity = 232/256 (90.62%), Postives = 240/256 (93.75%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSI+GGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ+VNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSISGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQAVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_MAIZE (Photosystem II CP47 chlorophyll apoprotein OS=Zea mays GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 9.144e-140 Identity = 232/256 (90.62%), Postives = 240/256 (93.75%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSI+GGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ+VNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSISGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQAVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_LOTJA (Photosystem II CP47 chlorophyll apoprotein OS=Lotus japonicus GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 9.144e-140 Identity = 231/256 (90.23%), Postives = 240/256 (93.75%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL+AVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGW+ITGGT+TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFL+G+ACFGFG FHVTGLYGPGIWVSDPYGLTG+VQ VNPAWGVEGFDPFVPGG+ASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFSDERTGKPSLDLPKIFGIHLFLAGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQPVNPAWGVEGFDPFVPGGVASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256 The following BLAST results are available for this feature:
BLAST of CK934608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934608 ID=CK934608; Name=CK934608; organism=Citrus sinensis; type=EST; length=948bpback to top |