CK934608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_CERDE (Photosystem II CP47 chlorophyll apoprotein OS=Ceratophyllum demersum GN=psbB PE=3 SV=1) HSP 1 Score: 494.967 bits (1273), Expect = 2.661e-139 Identity = 230/256 (89.84%), Postives = 240/256 (93.75%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSITGGT+TNPG+WSYEGVAGAHI+FSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFLSG+ACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSV+PAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGLWSYEGVAGAHIMFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVSPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_TRACE (Photosystem II CP47 chlorophyll apoprotein OS=Trachelium caeruleum GN=psbB PE=3 SV=1) HSP 1 Score: 493.426 bits (1269), Expect = 7.741e-139 Identity = 231/256 (90.23%), Postives = 237/256 (92.58%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHT+VLNDPGRL+AVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI +SWGGW ITGGT+T PGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTIVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIINSWGGWGITGGTITYPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFTDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQYVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_PELHO (Photosystem II CP47 chlorophyll apoprotein OS=Pelargonium hortorum GN=psbB PE=3 SV=1) HSP 1 Score: 493.041 bits (1268), Expect = 1.011e-138 Identity = 232/256 (90.62%), Postives = 238/256 (92.97%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSITGGT+TN GIWSYEGVAGAHIV SGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTG+VQSVNPAWGV GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNSGIWSYEGVAGAHIVLSGLCFLAAIWHWVYWDLEIFSDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQSVNPAWGVGGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_NUPAD (Photosystem II CP47 chlorophyll apoprotein OS=Nuphar advena GN=psbB PE=3 SV=1) HSP 1 Score: 492.271 bits (1266), Expect = 1.724e-138 Identity = 229/256 (89.45%), Postives = 238/256 (92.97%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSITGGT+TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ ++P+WG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYK LRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPISPSWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKALRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_PIPCE (Photosystem II CP47 chlorophyll apoprotein OS=Piper cenocladum GN=psbB PE=3 SV=1) HSP 1 Score: 489.96 bits (1260), Expect = 8.559e-138 Identity = 228/256 (89.06%), Postives = 237/256 (92.58%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALV+GWAGSM LYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSITGGT+TNPGIWSYEGVAGAHI+ SGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNP+WG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMVLYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIMLSGLCFLAAIWHWVYWDLEIFRDERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPSWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_CUSEX (Photosystem II CP47 chlorophyll apoprotein OS=Cuscuta exaltata GN=psbB PE=3 SV=1) HSP 1 Score: 489.96 bits (1260), Expect = 8.559e-138 Identity = 228/256 (89.06%), Postives = 235/256 (91.80%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGW I GGTVTNPG+WSYEGVAGAHI FSGLCFLAAIWHWVYWDL +F D+RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ + PAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWGIAGGTVTNPGLWSYEGVAGAHIAFSGLCFLAAIWHWVYWDLEVFYDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPLKPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_CUSRE (Photosystem II CP47 chlorophyll apoprotein OS=Cuscuta reflexa GN=psbB PE=3 SV=1) HSP 1 Score: 489.189 bits (1258), Expect = 1.460e-137 Identity = 227/256 (88.67%), Postives = 234/256 (91.41%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGW I GGTVTNPG+WSYEGVAGAHI FSGLCFLAAIWHWVYWDL +F D+RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ + P WG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWGIAGGTVTNPGLWSYEGVAGAHIAFSGLCFLAAIWHWVYWDLEVFYDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPIKPTWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_CYCTA (Photosystem II CP47 chlorophyll apoprotein OS=Cycas taitungensis GN=psbB PE=3 SV=1) HSP 1 Score: 486.493 bits (1251), Expect = 9.463e-137 Identity = 228/256 (89.06%), Postives = 235/256 (91.80%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI +SWGGWSITG TVTNPG+WSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFLSGVACFG G FHVTGLYGPGIWVSDPYGLTGK+Q VNPAWG EGFDPFVPGGIASHHIAAG LGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGINNSWGGWSITGETVTNPGLWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLDIFCDERTGKPSLDLPKIFGIHLFLSGVACFGSGAFHVTGLYGPGIWVSDPYGLTGKIQPVNPAWGAEGFDPFVPGGIASHHIAAGILGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFIVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_CRYJA (Photosystem II CP47 chlorophyll apoprotein OS=Cryptomeria japonica GN=psbB PE=3 SV=1) HSP 1 Score: 486.493 bits (1251), Expect = 9.463e-137 Identity = 228/256 (89.06%), Postives = 233/256 (91.02%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRLIAVHIMHTALV+GWAGSMALYELAVFDPSDP+LDPMWRQGMFVIPFMTRLGI DSWGGWSITG T +NPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL +F D RTGK SLDLPKIFGIHLFLSG ACFGFG FHVTGLYGPGIWVSDPYGLTGK+Q VNPAWG EGFDPFVPGGIASHHIAAG LGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVSGWAGSMALYELAVFDPSDPILDPMWRQGMFVIPFMTRLGIKDSWGGWSITGETGSNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLDVFCDSRTGKPSLDLPKIFGIHLFLSGAACFGFGAFHVTGLYGPGIWVSDPYGLTGKIQPVNPAWGAEGFDPFVPGGIASHHIAAGILGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFIVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_PINTH (Photosystem II CP47 chlorophyll apoprotein OS=Pinus thunbergii GN=psbB PE=3 SV=1) HSP 1 Score: 478.789 bits (1231), Expect = 1.973e-134 Identity = 225/256 (87.89%), Postives = 231/256 (90.23%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRLI+VHIMHTALVAGWAGSM LYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI DSW GW+ITG TV NPGIWSYEGVA AHIVFSGLCFLAAIWHWVYWDL IF D+RTGKR LDLPK+FGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGK+Q V+PAWG EGFDPFVPGGIASHHIAAG LGILAGLFHLSVRPPQRLY GLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLISVHIMHTALVAGWAGSMTLYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIKDSWSGWNITGETVINPGIWSYEGVAVAHIVFSGLCFLAAIWHWVYWDLDIFCDERTGKRCLDLPKVFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKIQPVDPAWGAEGFDPFVPGGIASHHIAAGILGILAGLFHLSVRPPQRLYVGLRMGNIETVLSSSIAAVFFAAFIVAGTM 256 The following BLAST results are available for this feature:
BLAST of CK934608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934608 ID=CK934608; Name=CK934608; organism=Citrus sinensis; type=EST; length=948bpback to top |