CK934608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_GNEPA (Photosystem II CP47 chlorophyll apoprotein OS=Gnetum parvifolium GN=psbB PE=3 SV=1) HSP 1 Score: 477.633 bits (1228), Expect = 4.396e-134 Identity = 221/256 (86.33%), Postives = 233/256 (91.02%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF++PFMTRLGI +SWGGWSITG + NPG+WSYEGVAGAHIVFSGLCFL+AIWHWVYWDL IF D RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDP+GLTG++Q V+PAWG EGFDPFVPGGIASHHIAAG LGI+AGLFHLSVRPPQRLY+GLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFILPFMTRLGIKESWGGWSITGESAVNPGLWSYEGVAGAHIVFSGLCFLSAIWHWVYWDLEIFSDPRTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPFGLTGRIQPVSPAWGAEGFDPFVPGGIASHHIAAGLLGIIAGLFHLSVRPPQRLYRGLRMGNIETVLSSSIAAVFFAAFIVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_PINKO (Photosystem II CP47 chlorophyll apoprotein OS=Pinus koraiensis GN=psbB PE=3 SV=1) HSP 1 Score: 474.937 bits (1221), Expect = 2.849e-133 Identity = 223/256 (87.11%), Postives = 230/256 (89.84%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRLI+VHIMHTALVAGWAGSM LYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI DSW GW+ITG TV NPGIWSYEGVAGAHI+FSGL FLAAIWHWVYWDL IF D+RTGK LDLPK+FGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGK+Q V+PAWG EGFDPFVPGGIASHHIAAG LGILAGLFHLSVRPPQRLY GLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLISVHIMHTALVAGWAGSMTLYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIKDSWSGWNITGETVINPGIWSYEGVAGAHIMFSGLMFLAAIWHWVYWDLEIFYDERTGKLCLDLPKVFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKIQPVDPAWGAEGFDPFVPGGIASHHIAAGILGILAGLFHLSVRPPQRLYVGLRMGNIETVLSSSIAAVFFAAFIVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_WELMI (Photosystem II CP47 chlorophyll apoprotein OS=Welwitschia mirabilis GN=psbB PE=3 SV=1) HSP 1 Score: 473.781 bits (1218), Expect = 6.347e-133 Identity = 219/256 (85.55%), Postives = 231/256 (90.23%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSD VLDPMWRQGMF++PFMTRLGI +SWGGWSITG + NPG+WSYEGVAGAHIVFSGLCFL+A WHWVYWDL IF D RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDP+GLTGK+Q V+PAWG EGFDPFVPGGIASHH+AAG LGI+AGLFHLSVRPPQRLY+GLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDSVLDPMWRQGMFILPFMTRLGIKESWGGWSITGEPIANPGLWSYEGVAGAHIVFSGLCFLSATWHWVYWDLEIFSDPRTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPFGLTGKIQPVSPAWGAEGFDPFVPGGIASHHVAAGLLGIIAGLFHLSVRPPQRLYRGLRMGNIETVLSSSIAAVFFAAFIVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_ANTFO (Photosystem II CP47 chlorophyll apoprotein OS=Anthoceros formosae GN=psbB PE=2 SV=1) HSP 1 Score: 470.7 bits (1210), Expect = 5.373e-132 Identity = 222/256 (86.72%), Postives = 229/256 (89.45%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRLIAVH+MHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT SWGGWSITG TVTN GIWSYEGVA HIV SGL FLAAIWHWVYWDL +F D+RTGK SLDLPKIFGIHLFLSGV CFGFG FHVTGL+GPGIWVSDPYGLTGKV+ V PAWG EGFDPFVPGGIASHHIAAG LGILAGLFHLSVRPPQRLYKGLRMGN+ETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLIAVHLMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITKSWGGWSITGETVTNAGIWSYEGVAAVHIVLSGLLFLAAIWHWVYWDLELFRDERTGKPSLDLPKIFGIHLFLSGVLCFGFGAFHVTGLFGPGIWVSDPYGLTGKVEPVAPAWGAEGFDPFVPGGIASHHIAAGILGILAGLFHLSVRPPQRLYKGLRMGNVETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_MARPO (Photosystem II CP47 chlorophyll apoprotein OS=Marchantia polymorpha GN=psbB PE=3 SV=1) HSP 1 Score: 469.159 bits (1206), Expect = 1.563e-131 Identity = 221/256 (86.33%), Postives = 228/256 (89.06%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRLIAVH+MHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT SWGGWSITG TVTN GIWSYEGVA HIV SGL FLAAIWHWVYWDL +F D+RTGK SLDLPKIFGIHLFLSGV CF FG FHVTGL+GPGIW+SDPYGLTGKVQ V PAWG EGFDPFVPGGIASHHIAAG LGILAGLFHLSVRPPQRLYKGLRMGN+ETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLIAVHLMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITKSWGGWSITGETVTNAGIWSYEGVAAVHIVLSGLLFLAAIWHWVYWDLELFRDERTGKPSLDLPKIFGIHLFLSGVLCFAFGAFHVTGLFGPGIWISDPYGLTGKVQPVAPAWGAEGFDPFVPGGIASHHIAAGILGILAGLFHLSVRPPQRLYKGLRMGNVETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_CHAVU (Photosystem II CP47 chlorophyll apoprotein OS=Chara vulgaris GN=psbB PE=3 SV=1) HSP 1 Score: 469.159 bits (1206), Expect = 1.563e-131 Identity = 217/256 (84.77%), Postives = 230/256 (89.84%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRLIAVHIMHTALV+GWAGSMALYELAVFDPSDP+LDPMWRQGMFVIPFMTRLGIT SWGGWSITG T+TNPGIWSYEGVA HI+ SGL FLAAIWHWVYWDL +F D+RTGK +LDLPKIFGIHLFLSG+ CFGFG FHVTGL+GPGIW+SDPYG+TGKVQSV+PAWG EGFDPF PGGIASHHIAAG LGILAGLFHLSVRPPQRLYK LRMGN+ETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVSGWAGSMALYELAVFDPSDPILDPMWRQGMFVIPFMTRLGITKSWGGWSITGETITNPGIWSYEGVAAVHIILSGLLFLAAIWHWVYWDLELFRDERTGKPALDLPKIFGIHLFLSGLLCFGFGAFHVTGLFGPGIWISDPYGITGKVQSVSPAWGAEGFDPFNPGGIASHHIAAGILGILAGLFHLSVRPPQRLYKALRMGNVETVLSSSIAAVFFAAFIVSGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_ZYGCR (Photosystem II CP47 chlorophyll apoprotein OS=Zygnema circumcarinatum GN=psbB PE=3 SV=1) HSP 1 Score: 466.848 bits (1200), Expect = 7.759e-131 Identity = 218/256 (85.16%), Postives = 228/256 (89.06%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRLIAVH+MHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLG+T SWGGWSITG TVTN G+WSYEGVA HIV SGL FLAAIWHWVYWDL +F D+RTGK SLDLPKIFGIHLFLSGV CFGFG FHVTGL+GPG+WVSDPYGLTG+VQ V PAWG EGFDPF PGGIASHHIAAG LGILAGLFHLSVRPPQRLYKGLRMGN+ETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLIAVHLMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGVTQSWGGWSITGETVTNAGLWSYEGVAAVHIVLSGLLFLAAIWHWVYWDLELFRDERTGKPSLDLPKIFGIHLFLSGVLCFGFGAFHVTGLFGPGVWVSDPYGLTGRVQPVAPAWGAEGFDPFNPGGIASHHIAAGILGILAGLFHLSVRPPQRLYKGLRMGNVETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_PHYPA (Photosystem II CP47 chlorophyll apoprotein OS=Physcomitrella patens GN=psbB PE=3 SV=1) HSP 1 Score: 466.848 bits (1200), Expect = 7.759e-131 Identity = 220/256 (85.94%), Postives = 227/256 (88.67%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRLIAVH+MHTALV+GWAGSMALYELAVFDPSDP+LDPMWRQGMFVIPFMTRLGIT SWGGWSITG TV N GIWSYEGVA HIV SGL FLAAIWHWVYWDL +F D+RTGK SLDLPKIFGIHLFLSGV CF FG FHVTGL+GPGIWVSDPYGLTGKVQ V PAWG EGFDPFVPGGIASHHIAAG LGILAGLFHLSVRPPQRLYKGLRMGN+ETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLIAVHLMHTALVSGWAGSMALYELAVFDPSDPILDPMWRQGMFVIPFMTRLGITKSWGGWSITGETVNNAGIWSYEGVAAVHIVLSGLLFLAAIWHWVYWDLELFRDERTGKPSLDLPKIFGIHLFLSGVLCFAFGAFHVTGLFGPGIWVSDPYGLTGKVQPVVPAWGAEGFDPFVPGGIASHHIAAGILGILAGLFHLSVRPPQRLYKGLRMGNVETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_ANGEV (Photosystem II CP47 chlorophyll apoprotein OS=Angiopteris evecta GN=psbB PE=3 SV=1) HSP 1 Score: 464.151 bits (1193), Expect = 5.029e-130 Identity = 216/256 (84.38%), Postives = 229/256 (89.45%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VH+MHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTR+GIT SWGGWSITG TV + GIWSYEGVA +HIV SGL FLAAIWHWVYWDL +F D+RTGK SLDLPKIFGIHLFLSGV CFGFG FH+TGL+GPGIWVSDPYGLTGKVQ V+PAWG EGFDPFVPGGIASHHIAAG LGILAGLFHLSVRPPQRLYK LRMGN+ETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHLMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRIGITKSWGGWSITGDTVNDAGIWSYEGVAASHIVLSGLLFLAAIWHWVYWDLDLFRDERTGKPSLDLPKIFGIHLFLSGVLCFGFGAFHITGLFGPGIWVSDPYGLTGKVQPVDPAWGAEGFDPFVPGGIASHHIAAGILGILAGLFHLSVRPPQRLYKALRMGNVETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_PSINU (Photosystem II CP47 chlorophyll apoprotein OS=Psilotum nudum GN=psbB PE=3 SV=1) HSP 1 Score: 462.611 bits (1189), Expect = 1.463e-129 Identity = 214/256 (83.59%), Postives = 229/256 (89.45%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRLIAVH+MHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTR+GIT SWGGWSITG TV++ GIWS+EGVA AHI SGL FL+AIWHWVYWDL +F D+RTGK SLDLPKIFGIHLFLSGV CFGFG FH+TGL+GPGIW+SDPYGLTGKVQ V+PAWG EGFDPF+PGGIASHHIAAG LGILAGLFHLSVRPPQRLYK LRMGN+ETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLIAVHLMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRIGITKSWGGWSITGDTVSDAGIWSFEGVAAAHITLSGLLFLSAIWHWVYWDLDLFRDERTGKPSLDLPKIFGIHLFLSGVLCFGFGAFHITGLFGPGIWISDPYGLTGKVQPVDPAWGAEGFDPFIPGGIASHHIAAGILGILAGLFHLSVRPPQRLYKALRMGNVETVLSSSIAAVFFAAFVVSGTM 256 The following BLAST results are available for this feature:
BLAST of CK934608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934608 ID=CK934608; Name=CK934608; organism=Citrus sinensis; type=EST; length=948bpback to top |