CK934616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODPA_RICTY (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia typhi GN=pdhA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 38/127 (29.92%), Postives = 70/127 (55.12%), Query Frame = 2 Query: 29 KGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY 409 KG ++GIR ++DG D +Y + E PV++E TYR HS SD + KYR+ +E+ +K ER + R R + + +E++ + S+++ + A++ +E + P+ EL++D+Y Sbjct: 201 KGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDPA-KYRSKEEVAKYK-ERDTLVRIRQIILDNKYATEEDLKAIERSVQEVIKVAVEFSENSPLPSEDELYTDIY 325
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODPAT_RAT (Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial OS=Rattus norvegicus GN=Pdha2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11 Identity = 42/141 (29.79%), Postives = 73/141 (51.77%), Query Frame = 2 Query: 35 RAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY-DVPPSNLAEQEKQLK 454 + + I +RV+G D L+V A + A + S K P+++E TYR HS SD YRT +E++ +++ P+ R + S +E E+ + +KK++ +A Q A +P + +L + +Y PP + K LK Sbjct: 246 KGFVIPGLRVNGMDILSVREATKFAADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRTREEVQNVRSKSDPIMLLRERMISNNLSSVEELKEIDADVKKEVEEAAQFATTDPEPPLEDLANYLYHQNPPFEVRGAHKWLK 386
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODBA_BACSU (2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis GN=bfmBAA PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11 Identity = 40/123 (32.52%), Postives = 65/123 (52.85%), Query Frame = 2 Query: 41 YGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY 409 YG+ + V+GND L VY AV+ ARE A + P L+E ++YR+ HS+ DD + YR +E+E K + P+ ++ +++ G S++ E + I + +A AE A VY Sbjct: 207 YGMPGVTVNGNDPLEVYQAVKEARERARRGEGPTLIETISYRLTPHSSDDDDSSYRGREEVEEAK-KSDPLLTYQAYLKETGLLSDEIEQTMLDEIMAIVNEATDEAENAPYAAPESALDYVY 328
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODPA_RICCN (Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia conorii GN=pdhA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 39/127 (30.71%), Postives = 70/127 (55.12%), Query Frame = 2 Query: 29 KGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVY 409 KG ++GI+ ++DG D +Y + A E P+++E TYR HS SD + KYR+ +E+E +K ER P+ R + + +E + + S+K+ + +A++ +E + P EL++ VY Sbjct: 201 KGASFGIKGFQLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGHSMSDPA-KYRSKEEVEQYK-ERDPLVIIRKTILDNKYVTEADLKAIEQSVKEIVKEAVEFSENSPLPDEGELYTQVY 325
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODPA_RAT (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Rattus norvegicus GN=Pdha1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 40/125 (32.00%), Postives = 62/125 (49.60%), Query Frame = 2 Query: 47 IRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPP 421 I +RVDG D L V A + A S K P+L+E TYR HS SD YRT +EI+ +++ P+ ++ + S +E E+ ++K++ A Q A +P + EL +Y P Sbjct: 249 IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDP 373
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODPA_PONAB (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Pongo abelii GN=PDHA1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 40/125 (32.00%), Postives = 62/125 (49.60%), Query Frame = 2 Query: 47 IRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPP 421 I +RVDG D L V A + A S K P+L+E TYR HS SD YRT +EI+ +++ P+ ++ + S +E E+ ++K++ A Q A +P + EL +Y P Sbjct: 249 IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDP 373
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODPA_MOUSE (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 40/125 (32.00%), Postives = 62/125 (49.60%), Query Frame = 2 Query: 47 IRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPP 421 I +RVDG D L V A + A S K P+L+E TYR HS SD YRT +EI+ +++ P+ ++ + S +E E+ ++K++ A Q A +P + EL +Y P Sbjct: 249 IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDP 373
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODPA_MACFA (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Macaca fascicularis GN=PDHA1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 40/125 (32.00%), Postives = 62/125 (49.60%), Query Frame = 2 Query: 47 IRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPP 421 I +RVDG D L V A + A S K P+L+E TYR HS SD YRT +EI+ +++ P+ ++ + S +E E+ ++K++ A Q A +P + EL +Y P Sbjct: 249 IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDP 373
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODPA_HUMAN (Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial OS=Homo sapiens GN=PDHA1 PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 40/125 (32.00%), Postives = 62/125 (49.60%), Query Frame = 2 Query: 47 IRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPP 421 I +RVDG D L V A + A S K P+L+E TYR HS SD YRT +EI+ +++ P+ ++ + S +E E+ ++K++ A Q A +P + EL +Y P Sbjct: 249 IPGLRVDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSKSDPIMLLKDRMVNSNLASVEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYHIYSSDP 373
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODPA_PORYE (Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra yezoensis GN=pdhA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 41/122 (33.61%), Postives = 67/122 (54.92%), Query Frame = 2 Query: 29 KGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITEL 394 K A+G+ I VDG D LAV A + A + A P L+EALTYR HS +D + R+ E E W R P+ + + ++ + E E+++++K +L QA++ A + +P ++EL Sbjct: 219 KAEAFGLPGIEVDGMDVLAVRQAAKQAVQRARQGDGPTLIEALTYRFRGHSLADPD-ELRSRQEKEAW-VARDPIKKLKKYILDNEIANIGELNEIQNAVKTELEQAVKFAISSPEPNMSEL 338 The following BLAST results are available for this feature:
BLAST of CK934616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934616 ID=CK934616; Name=CK934616; organism=Citrus sinensis; type=EST; length=704bpback to top |