CK934621
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934621 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.182e-25 Identity = 63/188 (33.51%), Postives = 97/188 (51.60%), Query Frame = 2 Query: 110 CGSGVVCGERDTGHGTDGG-----ELGKIISREMFEDLLPYRNDAR--CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHKTTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTA 646 CG G G +G G G + +++ F + +N A C + FYT AF+ A + +PGF + G++ KREIAAFFA H+T +CYI +++ +++ D +YYGRGP+Q++WN NY G A+G D L +P +A D V++FK+A+WFWM + Sbjct: 44 CGDGCQSGPCRSGRGGGGSGGGGANVASVVTSSFFNGI---KNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGH-------------FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 215
BLAST of CK934621 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.413e-24 Identity = 62/180 (34.44%), Postives = 94/180 (52.22%), Query Frame = 2 Query: 113 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDAR--CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHKTTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 640 G G G G G+ G + +++ F + +N A C + FYT AF+ A A+PGF + G E KREIAAFFA H+T +CYI +++ +++ D +YYGRGP+Q++WN NY G +G + L +P+ +A D V++FK+A+WFWM Sbjct: 61 GGGGGGGGGGGGGGSGGANVANVVTDAFFNGI---KNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGH-------------FCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWM 224
BLAST of CK934621 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.116e-24 Identity = 68/206 (33.01%), Postives = 101/206 (49.03%), Query Frame = 2 Query: 113 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDAR--CPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHKTTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXX--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVN 715 G G G G G G + +++ F + +N A C + FYT +F+ AA ++ GF KREIAAFFA H+T CYI +++ AS D PG+ YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM + H+V++ + + +N Sbjct: 68 GGGGGGGGGGGGGGGSGVSVESVVTEAFFNGI---KNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMN------NVHQVMLQGFGATIRAIN 251
BLAST of CK934621 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.564e-23 Identity = 63/185 (34.05%), Postives = 90/185 (48.65%), Query Frame = 2 Query: 95 GSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHKTTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXX--LPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 640 G G G G G + + E F + + + C + FYT +F+ AA+++ GF N KREIAAFFA H+T CYI +++ A+ D PG+ YYGRGP+Q++WN NY G+ +G D L +PD +A DP +SFK+A+WFWM Sbjct: 58 GPCWGSGGEAAAGMAGRKAGAGAGVSVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM 229
BLAST of CK934621 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.258e-22 Identity = 63/181 (34.81%), Postives = 87/181 (48.07%), Query Frame = 2 Query: 110 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHKTTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXLPGQ----YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 640 CG+G G T + I F + + + D+ C + FYT DAF+ A ++ FG G+E KREIAA FA H+T +CYI ++ AS D P Y+GRGPIQL+WN NY G A D L P+ ++ D V+SFK+A+W+WM Sbjct: 47 CGTGCQQGPCTTASPPPSNNVNADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGH-------------FCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWM 214 The following BLAST results are available for this feature:
BLAST of CK934621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934621 ID=CK934621; Name=CK934621; organism=Citrus sinensis; type=EST; length=724bpback to top |