CK934622

Overview
NameCK934622
Unique NameCK934622
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length440
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK934622 vs. ExPASy Swiss-Prot
Match: PSBK_DRIGR (Photosystem II reaction center protein K OS=Drimys granadensis GN=psbK PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.935e-23
Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = 1 
Query:  181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVMPVLFFLLAFVWQAAVSFR 363
            MLNIFSL+ ICLNSAL+SSSF FAKLPEAYAF NPIVD MPV+PVLFFLLA VWQAAVSFR
Sbjct:    1 MLNIFSLICICLNSALHSSSFFFAKLPEAYAFFNPIVDFMPVIPVLFFLLALVWQAAVSFR 61
[Close]
BLAST of CK934622 vs. ExPASy Swiss-Prot
Match: PSBK_DAUCA (Photosystem II reaction center protein K OS=Daucus carota GN=psbK PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.935e-23
Identity = 52/61 (85.25%), Postives = 56/61 (91.80%), Query Frame = 1 
Query:  181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVMPVLFFLLAFVWQAAVSFR 363
            MLNIFSL+ ICLNSA YSSS  FAKLPEAYAFLNPIVD+MPV+P+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNIFSLICICLNSAFYSSSLFFAKLPEAYAFLNPIVDLMPVIPLFFFLLAFVWQAAVSFR 61
[Close]
BLAST of CK934622 vs. ExPASy Swiss-Prot
Match: PSBK_SOLTU (Photosystem II reaction center protein K OS=Solanum tuberosum GN=psbK PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.300e-23
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 1 
Query:  181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVMPVLFFLLAFVWQAAVSFR 363
            MLN FSL+ ICLNS LYSSSF F KLPEAYAFLNPIVD+MPV+P+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNTFSLIGICLNSTLYSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
[Close]
BLAST of CK934622 vs. ExPASy Swiss-Prot
Match: PSBK_SOLLC (Photosystem II reaction center protein K OS=Solanum lycopersicum GN=psbK PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.300e-23
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 1 
Query:  181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVMPVLFFLLAFVWQAAVSFR 363
            MLN FSL+ ICLNS LYSSSF F KLPEAYAFLNPIVD+MPV+P+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNTFSLIGICLNSTLYSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
[Close]
BLAST of CK934622 vs. ExPASy Swiss-Prot
Match: PSBK_SOLBU (Photosystem II reaction center protein K OS=Solanum bulbocastanum GN=psbK PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.300e-23
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 1 
Query:  181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVMPVLFFLLAFVWQAAVSFR 363
            MLN FSL+ ICLNS LYSSSF F KLPEAYAFLNPIVD+MPV+P+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNTFSLIGICLNSTLYSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
[Close]
BLAST of CK934622 vs. ExPASy Swiss-Prot
Match: PSBK_ATRBE (Photosystem II reaction center protein K OS=Atropa belladonna GN=psbK PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.300e-23
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 1 
Query:  181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVMPVLFFLLAFVWQAAVSFR 363
            MLN FSL+ ICLNS LYSSSF F KLPEAYAFLNPIVD+MPV+P+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNTFSLIGICLNSTLYSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
[Close]
BLAST of CK934622 vs. ExPASy Swiss-Prot
Match: PSBK_EUCGG (Photosystem II reaction center protein K OS=Eucalyptus globulus subsp. globulus GN=psbK PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 4.310e-23
Identity = 52/61 (85.25%), Postives = 56/61 (91.80%), Query Frame = 1 
Query:  181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVMPVLFFLLAFVWQAAVSFR 363
            MLNIFSL+ ICL+S LYSSSF  AKLPEAYAFLNPIVD MPV+P+LFFLLAFVWQAAVSFR
Sbjct:    1 MLNIFSLICICLHSTLYSSSFFLAKLPEAYAFLNPIVDFMPVIPLLFFLLAFVWQAAVSFR 61
[Close]
BLAST of CK934622 vs. ExPASy Swiss-Prot
Match: PSBK_TOBAC (Photosystem II reaction center protein K OS=Nicotiana tabacum GN=psbK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 9.603e-23
Identity = 50/61 (81.97%), Postives = 55/61 (90.16%), Query Frame = 1 
Query:  181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVMPVLFFLLAFVWQAAVSFR 363
            MLN FSL+ ICLNS L+SSSF F KLPEAYAFLNPIVD+MPV+P+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNTFSLIGICLNSTLFSSSFFFGKLPEAYAFLNPIVDIMPVIPLFFFLLAFVWQAAVSFR 61
[Close]
BLAST of CK934622 vs. ExPASy Swiss-Prot
Match: PSBK_SOYBN (Photosystem II reaction center protein K OS=Glycine max GN=psbK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 9.603e-23
Identity = 50/61 (81.97%), Postives = 57/61 (93.44%), Query Frame = 1 
Query:  181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVMPVLFFLLAFVWQAAVSFR 363
            MLNIF+L+ IC++S LYSSSF  AKLPEAYAFLNPIVD+MPV+P+LFFLLAFVWQAAVSFR
Sbjct:    1 MLNIFNLVCICIHSVLYSSSFFSAKLPEAYAFLNPIVDIMPVIPLLFFLLAFVWQAAVSFR 61
[Close]
BLAST of CK934622 vs. ExPASy Swiss-Prot
Match: PSBK_POPAL (Photosystem II reaction center protein K OS=Populus alba GN=psbK PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 9.603e-23
Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 1 
Query:  181 MLNIFSLMYICLNSALYSSSFLFAKLPEAYAFLNPIVDVMPVMPVLFFLLAFVWQAAVSFR 363
            MLNI +L+ ICLN ALYSSSF F KLPEAYAFLNPIVDVMPV+P+ FFLLAFVWQAAVSFR
Sbjct:    1 MLNILNLICICLNFALYSSSFFFTKLPEAYAFLNPIVDVMPVIPLFFFLLAFVWQAAVSFR 61
The following BLAST results are available for this feature:
BLAST of CK934622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PSBK_DRIGR1.935e-2386.89Photosystem II reaction center protein K OS=Drimys... [more]
PSBK_DAUCA1.935e-2385.25Photosystem II reaction center protein K OS=Daucus... [more]
PSBK_SOLTU3.300e-2383.61Photosystem II reaction center protein K OS=Solanu... [more]
PSBK_SOLLC3.300e-2383.61Photosystem II reaction center protein K OS=Solanu... [more]
PSBK_SOLBU3.300e-2383.61Photosystem II reaction center protein K OS=Solanu... [more]
PSBK_ATRBE3.300e-2383.61Photosystem II reaction center protein K OS=Atropa... [more]
PSBK_EUCGG4.310e-2385.25Photosystem II reaction center protein K OS=Eucaly... [more]
PSBK_TOBAC9.603e-2381.97Photosystem II reaction center protein K OS=Nicoti... [more]
PSBK_SOYBN9.603e-2381.97Photosystem II reaction center protein K OS=Glycin... [more]
PSBK_POPAL9.603e-2383.61Photosystem II reaction center protein K OS=Populu... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004228_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934622 ID=CK934622; Name=CK934622; organism=Citrus sinensis; type=EST; length=440bp
GGGGAAAGTATGATTTCTTCAATTCTCACACGAGAATAGAAGGATTTTTG
TTTTGATTGGGTCGGTTCCAAGAAGTTTTTTTTGTCTACCTTACTTTCTT
TTCTTCATTTTTATCTTATATCAATAAGATATTAATAACTCAATCAAAAT
AAAATTATCTCCAAGAACAAAATGTTTGTTATGCTTAATATCTTTAGTTT
AATGTATATCTGCCTTAATTCTGCCCTTTATTCGAGTAGTTTTTTATTCG
CTAAATTACCCGAGGCCTACGCTTTTTTGAATCCAATTGTAGATGTTATG
CCAGTAATGCCTGTTCTATTTTTTCTCTTAGCCTTTGTTTGGCAAGCTGC
TGTAAGTTTTCGATAAGATCTTTAATATTGTGCTAGAAAAATTCATGATT
TATTCTAGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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