CK934622

Overview
NameCK934622
Unique NameCK934622
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length440
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK934622 vs. ExPASy Swiss-Prot
Match: PSBK_CYAP4 (Photosystem II reaction center protein K OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=psbK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.432e-11
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 1 
Query:  244 LFAKLPEAYAFLNPIVDVMPVMPVLFFLLAFVWQAAVSFR 363
            LFAKLPEAY+  +P+VDV+PV+PVLF  LAFVWQA+V FR
Sbjct:    6 LFAKLPEAYSIFDPLVDVLPVIPVLFLALAFVWQASVGFR 45
The following BLAST results are available for this feature:
BLAST of CK934622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PSBK_CYAP48.432e-1172.50Photosystem II reaction center protein K OS=Cyanot... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004228_G09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934622 ID=CK934622; Name=CK934622; organism=Citrus sinensis; type=EST; length=440bp
GGGGAAAGTATGATTTCTTCAATTCTCACACGAGAATAGAAGGATTTTTG
TTTTGATTGGGTCGGTTCCAAGAAGTTTTTTTTGTCTACCTTACTTTCTT
TTCTTCATTTTTATCTTATATCAATAAGATATTAATAACTCAATCAAAAT
AAAATTATCTCCAAGAACAAAATGTTTGTTATGCTTAATATCTTTAGTTT
AATGTATATCTGCCTTAATTCTGCCCTTTATTCGAGTAGTTTTTTATTCG
CTAAATTACCCGAGGCCTACGCTTTTTTGAATCCAATTGTAGATGTTATG
CCAGTAATGCCTGTTCTATTTTTTCTCTTAGCCTTTGTTTGGCAAGCTGC
TGTAAGTTTTCGATAAGATCTTTAATATTGTGCTAGAAAAATTCATGATT
TATTCTAGTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top