CK934699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PSMR_METB6 (Proteasome-activating nucleotidase OS=Methanoregula boonei (strain 6A8) GN=pan PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.136e-30 Identity = 68/155 (43.87%), Postives = 96/155 (61.94%), Query Frame = 3 Query: 426 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 PL + +++ N + ++ +F+V V+P DI+ G R +++ I LP D V M + + P Y D+GG KEQI ++RE VELP+ PE F ++GI+PPKGVL YGPPGTGKTLLA+AVA+ T+A F+RV+GSELV Sbjct: 99 PLIIGTVVDVVDAN----RVIVRSSAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAHFMRVVGSELV 249
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 9.214e-30 Identity = 67/155 (43.23%), Postives = 99/155 (63.87%), Query Frame = 3 Query: 426 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 PL + T +I ++S+ ++ +F+V + P ++ G+R +++ I LP D + M + E P+ TY ++GG + QIE++RE VELP+ P+ F K+GI PPKGVL YGPPGTGKTLLARAVA++T+A F+RV+GSELV Sbjct: 74 PLVIGTVTDVI----DNSRVIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSELV 224
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.053e-29 Identity = 69/155 (44.52%), Postives = 96/155 (61.94%), Query Frame = 3 Query: 426 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 PL V T II + + V+ +F+V + V+PT ++ G+R +++ I LP D V M + + P TY D+GG ++QI ++RE VELPM P+ F K+GI+PPKGVL YGPPGTGKTLLA+AVA+ T A F+ +GSELV Sbjct: 74 PLIVGTITDII----DSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHETHAIFLHTVGSELV 224
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.681e-29 Identity = 67/155 (43.23%), Postives = 99/155 (63.87%), Query Frame = 3 Query: 426 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 PL + T +I+ N + ++ +F+VG+ ++ +I+ G R +++ I LP D + M V E P Y ++GG ++QI ++RE VELP+ PE F K+GI+PPKGVL +GPPGTGKTLLARAVA++T+A F+RV+GSELV Sbjct: 74 PLVIGTVTDLIDEN----RVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELV 224
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.681e-29 Identity = 73/176 (41.48%), Postives = 102/176 (57.95%), Query Frame = 3 Query: 390 LVSDKQMMQEEQPLQVARCTKIINPNS---------EDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 L +K +Q+E TK+++P +D++ V+ +V + V ++ G V ++ I LP + DP V M VEE+P V + DVGG +EQI ++ E V LP+ +P F +LGIDPPKGVL +GPPGTGKTLLA+AVA T+A FIRV+GSELV Sbjct: 35 LTKEKISLQKELEYYKNEITKLLSPPYIEAVVLEVIDDNRVVVKSSTGPNLIVNVAAGVDARSLKPGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELV 210
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 4.573e-29 Identity = 60/140 (42.86%), Postives = 93/140 (66.43%), Query Frame = 3 Query: 471 EDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 + ++++ ++VVG + V + + +G+RV +D I LP ++DP V M++E+ D+++ VGG EQI ++REV+ELP+ +PE F+++GI PPKGVL YGPPGTGKTLLARAVA F++V+ S +V Sbjct: 64 DSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIV 203
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS6A_BRACM (26S protease regulatory subunit 6A homolog OS=Brassica campestris GN=TBP1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.972e-29 Identity = 85/246 (34.55%), Postives = 129/246 (52.44%), Query Frame = 3 Query: 228 DEDDIALLKTYGLGPYSTSIKKAEKEIKDMAKKVNDLCG-----IKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDS----------------KYVI----NVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 +ED +A + T + + ++ + +K+ A++ N C IKE+ +K + ++ P V +I+ N ED K V+ + I VVGL V P ++ G VGV+++ Y I LP + D V M V+EKP YND+GG ++QI+++ E + LPM H E+F KLG+ PPKGVL YGPPGTGKTL+ARA A +T+A F+++ G +LV Sbjct: 13 EEDQLASMSTEDIVRATRLLENEIRILKEDAQRTNLECDSYKEKIKENQ-------------EKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGL---VDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLV 242
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 5.972e-29 Identity = 65/155 (41.94%), Postives = 98/155 (63.23%), Query Frame = 3 Query: 426 PLQVARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 P+ V +II +D+ +++ ++ V + V +E G V ++ + + L DP VT+M +E+ P TY D+GG QI++++E VELP+ HPE + ++GI PPKGV+ YGPPGTGKTLLA+AVAN+T A F+RV+GSEL+ Sbjct: 105 PMSVGNLEEII----DDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELI 255
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS10_SPETR (26S protease regulatory subunit S10B OS=Spermophilus tridecemlineatus GN=PSMC6 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.972e-29 Identity = 74/202 (36.63%), Postives = 116/202 (57.43%), Query Frame = 3 Query: 297 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQ----VARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 +K ++D KK L KE D L + KQ + E L+ V + + + K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTLLARAVA++ D F++V+ S +V Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIV 204
BLAST of CK934699 vs. ExPASy Swiss-Prot
Match: PRS10_MOUSE (26S protease regulatory subunit S10B OS=Mus musculus GN=Psmc6 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.972e-29 Identity = 74/202 (36.63%), Postives = 116/202 (57.43%), Query Frame = 3 Query: 297 EKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQ----VARCTKIINPNSEDSKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELV 890 +K ++D KK L KE D L + KQ + E L+ V + + + K+++ ++VVG ++ + ++ G RV +D I LP ++DP V M+ E+ +V+Y+++GG EQI ++REV+ELP+ +PE F ++GI PPKG L YGPPGTGKTLLARAVA++ D F++V+ S +V Sbjct: 6 DKALQDYRKK---LLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIV 204 The following BLAST results are available for this feature:
BLAST of CK934699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934699 ID=CK934699; Name=CK934699; organism=Citrus sinensis; type=EST; length=890bpback to top |