CK934724

Overview
NameCK934724
Unique NameCK934724
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length967
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934724 vs. ExPASy Swiss-Prot
Match: PMO25_SCHPO (Mo25-like protein OS=Schizosaccharomyces pombe GN=pmo25 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.038e-53
Identity = 115/283 (40.64%), Postives = 182/283 (64.31%), Query Frame = 2
Query:  116 MKGLFKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFXVFQLF 964
            M  LF  +P++  D+VR   D +     + D ++S       E+ K ++ L+  L G +E EP ++  + L+ + ++ N   LL+  LPKL  E++KD   + + L R+ V S+    DY+ A+  +  +L++ Y   ++A   G++LREC RH+++   +L S+    FF  IQ  +FD+A+DA +TFK +L  HKS VAEF+S ++D FF +Y + LL+S NY+T+RQ++KLLG+ILL+R+N  VMTRY+SS ENL+++M LLR+ SK+IQ EAF VF+LF
Sbjct:    1 MSFLFNKRPKSTQDVVRCLCDNLPKLEINNDKKKS-----FEEVSKCLQNLRVSLCGTAEVEPDADLVSDLSFQIYQSNLPFLLVRYLPKLEFESKKDTGLIFSALLRRHVASRYPTVDYMLAHPQIFPVLVSYYRYQEVAFTAGSILRECSRHEALNEVLLNSRDFWTFFSLIQASSFDMASDAFSTFKSILLNHKSQVAEFISYHFDEFFKQY-TVLLKSENYVTKRQSLKLLGEILLNRANRSVMTRYISSAENLKLMMILLRDKSKNIQFEAFHVFKLF 277          
BLAST of CK934724 vs. ExPASy Swiss-Prot
Match: DEE76_CHLPR (Degreening-related gene dee76 protein OS=Chlorella protothecoides GN=DEE76 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.820e-51
Identity = 107/251 (42.63%), Postives = 163/251 (64.94%), Query Frame = 2
Query:  215 ESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSK-LIASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFXVFQLF 964
            ESK++  + ++ K I  +K  ++G  E     E    + +E  R   +  L+T L  L+ E RKD  Q+   + R  +        DY+ A+ D+L  L  GYE+ ++AL+ G M RECIRH+ +A++VLE    ++ F+ + + +F++A+DA ATFK+LLTRHK  VA FL +NY+ FF++ + KLL S NY+TRRQ++KLLG++LLDR N  +M +YVS   NL ++MNLL++SS+SIQ EAF VF++F
Sbjct:   19 ESKQDRVVEDISKAIMSIKEAIFGEDEQSSSKEHAQGIASEACRVGLVSDLVTYLTVLDFETRKDVVQIFCAIIRITLEDGGRPGRDYVLAHPDVLSTLFYGYEDPEIALNCGQMFRECIRHEDIAKFVLECNLFEELFEKLNVQSFEVASDAFATFKDLLTRHKQLVAAFLQENYEDFFSQLD-KLLTSDNYVTRRQSLKLLGELLLDRVNVKIMMQYVSDVNNLILMMNLLKDSSRSIQFEAFHVFKVF 268          
BLAST of CK934724 vs. ExPASy Swiss-Prot
Match: HYMA_EMENI (Conidiophore development protein hymA OS=Emericella nidulans GN=hymA PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.406e-42
Identity = 104/306 (33.99%), Postives = 167/306 (54.58%), Query Frame = 2
Query:  131 KSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELCKNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQR-QQVHSKL----IASDYLEANIDLLDILIAGYENTDMALHYGAMLRECIRHQSVARYVLESQHMK-----------------------KFFDYIQLPNFDIAADAAATFKELLTRHKSTVAEFLSKNYDWFFAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFXVFQLF 964
            + + R P D+VR  +DL++     +    SK ED   EL K + ++K ++ G  E E  ++    L      E+ L  L   L  L  EARKD   + +++ R +  H       + S  +    +++  L  GYE++  A+  G +LRE ++   +A  +L  Q  +                       +FF +I    F+++ADA  TF+E+LTRHKS V  +L+ N+D+FFA++N+ L++S +Y+T+RQ++KLLG+ILLDR+N  VM RYV S ENL++ M LLR+  K +Q E F VF++F
Sbjct:    7 RGRSRQPSDVVRSIKDLLLRLREPSTA--SKVED---ELAKQLSQMKLMVQGTQELEASTDQVHALVQAMLHEDLLYELAVALHNLPFEARKDTQTIFSHILRFKPPHGNSPDPPVISYIVHNRPEIIIELCRGYEHSQSAMPCGTILREALKFDVIAAIILYDQSKEGEPAIRLTEVQPNVPQRGTGVFWRFFHWIDRGTFELSADAFTTFREILTRHKSLVTGYLATNFDYFFAQFNTFLVQSESYVTKRQSIKLLGEILLDRANYSVMMRYVESGENLKLCMKLLRDDRKMVQYEGFHVFKVF 307          
BLAST of CK934724 vs. ExPASy Swiss-Prot
Match: HYM1_YEAST (Protein HYM1 OS=Saccharomyces cerevisiae GN=HYM1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 3.040e-29
Identity = 80/288 (27.78%), Postives = 151/288 (52.43%), Query Frame = 2
Query:  128 FKSKPRTPVDIVRQTRDLIIYANRSADVRESKREDKMAELC-KNIRELKSILYGNSESEPVSEACAQLTAEFFRENTLRLLITCLPKLNLEARKDATQVVANLQRQQVHSKLIASDYLEANIDLLDILIAGYENT-------DMALHYGAMLRECIRHQSVARYVLESQHMKKFFDYIQLPNFDIAADAAATFKELLTRHKSTVA-EFLSKNYDWF-FAEYNSKLLESSNYITRRQAVKLLGDILLDRSNSVVMTRYVSSRENLRILMNLLRESSKSIQIEAFXVFQL 961
            +K  P+TP D  R   + +   +  +  +++KR  K+ E C K +   K  + G+++  P  EA  +L     R +    L+     L  EAR++   + +        +K +  DYL +    + +++   E         D+ L  G M+ ECI+++ + R +L+   + KFF++ +L NF+I+ ++        T H   V+ EF S   +   F +  +KL+   +Y+T+RQ+ KLL  +++ RSN+ +M  Y++S ENL+++M L+ + SK++Q+EAF VF++
Sbjct:   16 WKKNPKTPSDYARLIIEQLNKFSSPSLTQDNKR--KVQEECTKYLIGTKHFIVGDTDPHPTPEAIDELYTAMHRADVFYELLLHFVDLEFEARRECMLIFSICLGYSKDNKFVTVDYLVSQPKTISLMLRTAEVALQQKGCQDIFLTVGNMIIECIKYEQLCRIILKDPQLWKFFEFAKLGNFEISTESLQILSAAFTAHPKLVSKEFFSNEINIIRFIKCINKLMAHGSYVTKRQSTKLLASLIVIRSNNALMNIYINSPENLKLIMTLMTDKSKNLQLEAFNVFKV 301          
The following BLAST results are available for this feature:
BLAST of CK934724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PMO25_SCHPO1.038e-5340.64Mo25-like protein OS=Schizosaccharomyces pombe GN=... [more]
DEE76_CHLPR4.820e-5142.63Degreening-related gene dee76 protein OS=Chlorella... [more]
HYMA_EMENI1.406e-4233.99Conidiophore development protein hymA OS=Emericell... [more]
HYM1_YEAST3.040e-2927.78Protein HYM1 OS=Saccharomyces cerevisiae GN=HYM1 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004227_E12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934724 ID=CK934724; Name=CK934724; organism=Citrus sinensis; type=EST; length=967bp
GGGGGCGTCAAAGCCGAAAGCTGAGGCGCTCTCAGCCTCGGCGAGTCAAT
CGGTCCAGCGCCTCTCGAGCTCAGCCAGTTCAAGTTCGATTAACGAATTA
GACCCTAACACAAAAATGAAGGGACTTTTCAAATCCAAGCCTCGTACTCC
CGTCGACATCGTCCGCCAAACTCGGGATCTTATTATTTACGCCAATCGCA
GCGCAGATGTTCGTGAATCGAAGCGCGAAGACAAGATGGCAGAGTTATGT
AAAAACATCAGGGAGTTAAAGTCAATACTTTATGGCAATAGTGAATCTGA
GCCAGTTTCAGAGGCATGTGCACAATTGACTGCAGAGTTCTTCAGGGAAA
ACACGTTACGGCTTTTGATAACTTGTCTTCCAAAGTTGAACTTGGAGGCA
AGGAAAGATGCCACTCAGGTTGTTGCTAATTTACAGAGGCAACAAGTTCA
CTCAAAGTTGATTGCCTCTGACTACTTAGAAGCAAACATAGATCTTTTGG
ATATTCTGATAGCTGGTTATGAAAACACAGACATGGCTTTACATTATGGT
GCTATGCTTAGGGAGTGTATTCGTCATCAGAGTGTTGCAAGATATGTGTT
GGAATCCCAGCACATGAAGAAGTTTTTTGACTATATACAGCTTCCAAATT
TTGACATTGCTGCAGATGCTGCTGCAACTTTTAAGGAACTGTTGACAAGG
CACAAATCCACTGTGGCCGAATTTCTTTCTAAGAATTATGACTGGTTTTT
TGCAGAATATAACTCAAAACTGTTGGAATCTTCCAATTACATTACCAGAC
GACAAGCTGTCAAGCTGTTGGGAGACATATTACTGGATCGGTCAAATTCA
GTAGTGATGACAAGATATGTGAGCTCAAGGGAAAATTTGAGGATACTCAT
GAATCTTCTTAGAGAATCCAGCAAGAGTATCCAGATAGAAGCATTTCANG
TTTTTCAGCTGTTTGCT
back to top