CK934737

Overview
NameCK934737
Unique NameCK934737
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ACTC_STRPU (Actin, cytoskeletal 2A OS=Strongylocentrotus purpuratus GN=CYIIA PE=2 SV=1)

HSP 1 Score: 445.662 bits (1145), Expect = 1.605e-124
Identity = 218/241 (90.46%), Postives = 229/241 (95.02%), Query Frame = 3
Query:  141 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQELETAXXSSSVEKNYELP 863
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL YV LD+EQE++TA  SSS+EK+YELP
Sbjct:    4 DDVAALVVDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELP 244          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ACTC_PISOC (Actin, cytoplasmic OS=Pisaster ochraceus PE=3 SV=1)

HSP 1 Score: 445.662 bits (1145), Expect = 1.605e-124
Identity = 218/241 (90.46%), Postives = 228/241 (94.61%), Query Frame = 3
Query:  141 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQELETAXXSSSVEKNYELP 863
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL YV LD+EQE++TA  SSS+EK+YELP
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELP 244          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ACTC_HALRO (Actin, nonmuscle OS=Halocynthia roretzi GN=CA1 PE=3 SV=1)

HSP 1 Score: 445.662 bits (1145), Expect = 1.605e-124
Identity = 218/241 (90.46%), Postives = 228/241 (94.61%), Query Frame = 3
Query:  141 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQELETAXXSSSVEKNYELP 863
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKLAYV LD+E E++TA  SSS+EK+YELP
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFETEMQTAATSSSIEKSYELP 244          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ACT2_STRFN (Actin-15B OS=Strongylocentrotus franciscanus PE=2 SV=1)

HSP 1 Score: 445.662 bits (1145), Expect = 1.605e-124
Identity = 218/241 (90.46%), Postives = 229/241 (95.02%), Query Frame = 3
Query:  141 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQELETAXXSSSVEKNYELP 863
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL YV LD+EQE++TA  SSS+EK+YELP
Sbjct:    4 DDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELP 244          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ACT1_STRFN (Actin-15A OS=Strongylocentrotus franciscanus PE=3 SV=1)

HSP 1 Score: 445.662 bits (1145), Expect = 1.605e-124
Identity = 218/241 (90.46%), Postives = 229/241 (95.02%), Query Frame = 3
Query:  141 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQELETAXXSSSVEKNYELP 863
            +D+  LV DNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL YV LD+EQE++TA  SSS+EK+YELP
Sbjct:    4 DDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELP 244          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ACTC_BIOTE (Actin, cytoplasmic OS=Biomphalaria tenagophila PE=3 SV=1)

HSP 1 Score: 445.277 bits (1144), Expect = 2.097e-124
Identity = 217/241 (90.04%), Postives = 229/241 (95.02%), Query Frame = 3
Query:  141 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQELETAXXSSSVEKNYELP 863
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL YV LD+EQE++TA  SSS+EK+YELP
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELP 244          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ACTC_BIOOB (Actin, cytoplasmic OS=Biomphalaria obstructa PE=3 SV=1)

HSP 1 Score: 445.277 bits (1144), Expect = 2.097e-124
Identity = 217/241 (90.04%), Postives = 229/241 (95.02%), Query Frame = 3
Query:  141 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQELETAXXSSSVEKNYELP 863
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL YV LD+EQE++TA  SSS+EK+YELP
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELP 244          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ACT3_SOYBN (Actin-3 OS=Glycine max GN=SAC3 PE=3 SV=2)

HSP 1 Score: 445.277 bits (1144), Expect = 2.097e-124
Identity = 225/245 (91.84%), Postives = 229/245 (93.47%), Query Frame = 3
Query:  129 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQELETAXXSSSVEKNYELP 863
            MADAEDI+PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD YVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRV  EE  VL  EAPLNPK NRE   QIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG ALPHAILRLDLAGRDLTD LMKILTERGYMFTT+AEREIVRDMKEKLAYV LDYEQELETA  SSSVEK++ELP
Sbjct:    1 MADAEDIEPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDXYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVVSEEPXVLSXEAPLNPKVNRES-AQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGDALPHAILRLDLAGRDLTDHLMKILTERGYMFTTSAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKSHELP 244          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ACT2_SCHMA (Actin-2 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 445.277 bits (1144), Expect = 2.097e-124
Identity = 220/245 (89.80%), Postives = 231/245 (94.29%), Query Frame = 3
Query:  129 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQELETAXXSSSVEKNYELP 863
            MAD E++Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL YV LD+EQE+ TA  SSS+EK+YELP
Sbjct:    1 MAD-EEVQALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 244          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ACT_CRAGI (Actin OS=Crassostrea gigas PE=2 SV=1)

HSP 1 Score: 444.891 bits (1143), Expect = 2.738e-124
Identity = 219/241 (90.87%), Postives = 228/241 (94.61%), Query Frame = 3
Query:  141 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQELETAXXSSSVEKNYELP 863
            EDI  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI+RLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKL YV LD+EQE+ TA  SSS+EK+YELP
Sbjct:    4 EDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELP 244          
The following BLAST results are available for this feature:
BLAST of CK934737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
ACTC_STRPU1.605e-12490.46Actin, cytoskeletal 2A OS=Strongylocentrotus purpu... [more]
ACTC_PISOC1.605e-12490.46Actin, cytoplasmic OS=Pisaster ochraceus PE=3 SV=1[more]
ACTC_HALRO1.605e-12490.46Actin, nonmuscle OS=Halocynthia roretzi GN=CA1 PE=... [more]
ACT2_STRFN1.605e-12490.46Actin-15B OS=Strongylocentrotus franciscanus PE=2 ... [more]
ACT1_STRFN1.605e-12490.46Actin-15A OS=Strongylocentrotus franciscanus PE=3 ... [more]
ACTC_BIOTE2.097e-12490.04Actin, cytoplasmic OS=Biomphalaria tenagophila PE=... [more]
ACTC_BIOOB2.097e-12490.04Actin, cytoplasmic OS=Biomphalaria obstructa PE=3 ... [more]
ACT3_SOYBN2.097e-12491.84Actin-3 OS=Glycine max GN=SAC3 PE=3 SV=2[more]
ACT2_SCHMA2.097e-12489.80Actin-2 OS=Schistosoma mansoni PE=2 SV=1[more]
ACT_CRAGI2.738e-12490.87Actin OS=Crassostrea gigas PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_D01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934737 ID=CK934737; Name=CK934737; organism=Citrus sinensis; type=EST; length=864bp
GGGGACTACTACATTTTTAATCTCTCGGCAGTACCAAATACAGAGCGATA
GAGAGAATCGACACTCTCAGCTAGACTCCATCTTCGAATTTTTCTCTCGT
CGTCTCTTCAATCTAACTTTTATAAAAAATGGCCGATGCTGAGGATATTC
AACCCCTTGTTTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTTGCT
GGAGATGATGCTCCAAGGGCAGTATTCCCTAGTATTGTTGGTAGGCCTCG
ACACACTGGAGTCATGGTTGGAATGGGGCAGAAGGATGCCTATGTTGGTG
ATGAGGCCCAATCGAAAAGAGGTATTCTTACTTTGAAATACCCAATTGAG
CACGGTATTGTAAGCAACTGGGATGATATGGAAAAGATCTGGCATCATAC
CTTCTACAACGAGCTTCGTGTTGCTCCTGAAGAGCACCCAGTGCTTCTCA
CTGAGGCACCTCTTAACCCCAAGGCCAACAGAGAGAAGATGACCCAAATT
ATGTTTGAAACTTTCAATGTGCCAGCCATGTACGTTGCCATCCAGGCTGT
TCTATCTCTTTATGCCAGTGGTCGTACAACTGGTATTGTGCTGGATTCTG
GTGATGGTGTGTCTCATACTGTACCAATTTATGAGGGATATGCCCTTCCT
CATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCTCACTGATGCATT
GATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCACCACAGCCGAAC
GGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTATGTTGTCCTAGAC
TATGAGCAAGAACTTGAGACTGCCNNNNGCAGCTCATCTGTTGAGAAGAA
CTATGAGCTGCCTG
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