CK934737

Overview
NameCK934737
Unique NameCK934737
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ARP10_BOVIN (Actin-related protein 10 OS=Bos taurus GN=ACTR10 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.959e-13
Identity = 62/248 (25.00%), Postives = 113/248 (45.56%), Query Frame = 3
Query:  156 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAERE------------IVRDMKEKLAYVVLDYEQELETAXXSSSVEKNYELP 863
            +V D G    K GFAG+  PR + PS++ +                    A   + I  ++Y I    + ++  +++  H  ++  L V P +  V++ E+ L P   RE +T+++F+ F VP++ +A   +++L   G  + +VLD G   S  +PIYEG  + +    L L G+ L   L   L E+  + T  A+ +            I+ D+K +  + V D ++ L       +++ N E P
Sbjct:   16 VVIDLGEAFTKCGFAGETGPRCIIPSVIKK--------------------AGMPKPIRVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTGAAKEQSLPSVMGSIPEGILEDIKVRTCF-VSDLKRGLNIQAAKFNIDGNTERP 240          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ARP5_DROME (Actin-related protein 5 OS=Drosophila melanogaster GN=Arp5 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.559e-13
Identity = 50/240 (20.83%), Postives = 110/240 (45.83%), Query Frame = 3
Query:  156 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-----HTGVMVGMGQK-------DAYVGDEAQSKRGILT-LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQEL 815
            LV DNG+   + G++    P   F +++ +PR           G   +       +  VG++  +   +   LK P E  +++NW+  E+I+ + F        +  +HP++LTEA  NP   R++M +++FE + +P++   I A+ S           +  +++  G   +H +P+ +G      + RL++ G  +   L +++  +  +         +  +  +  ++ +DY++EL
Sbjct:    7 LVIDNGSYECRVGWSDSKEPDLRFRNVLTKPRKDRKKEAAASEGSASQTTVEQSAEIQVGNDITNIEAVRAHLKSPFERNVITNWNHQEQIFDYIFTKMGFDGQDKIDHPIILTEALANPNFCRQQMNELLFECYGIPSVSYGIDALYSWKHHQQKQKNISDALIISFGYSTTHVIPVLDGKLQLEHVRRLNVGGYHIITYLFRLMQMKYPVHLNAITISRMEKLVHEHCHIAVDYKEEL 246          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ARP4_CANAL (Actin-related protein 4 OS=Candida albicans GN=ARP4 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.559e-13
Identity = 43/193 (22.28%), Postives = 90/193 (46.63%), Query Frame = 3
Query:  141 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 719
            ++I  +V D G+   + G+AGDD P+ +  S  G+ ++         K    G+     R    +K  ++  I+ +WD   + + + F  +L+V   E P+L+TE      + R+++ +  FE      +Y+A     + +  GR+  +V+D G       P+ +G  L  + ++ +  G+ L++ +   L +
Sbjct:   13 DEINAIVLDPGSYTTRIGYAGDDFPKVITSSYYGQVKN--------DKKKIFGESINVPRANYDIKPILKESIIVDWDAAIEQYQYYFDQQLKVVGPEQPILITEPIWTETSYRQQLVETFFENDEFRGIYIAKSPTCASFQQGRSNCLVVDLGHDSVLVTPVIDGICLLKSSMKTNYGGKFLSNEIQDYLID 197          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ARP6_HUMAN (Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.342e-13
Identity = 61/245 (24.90%), Postives = 115/245 (46.94%), Query Frame = 3
Query:  156 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTG-----IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQELETA---XXSSSVEKNYELP 863
            LV DNG    K G++ ++   +V P+   R +   +      +     DE +   G+  +  P + G + NWD   ++W + F  E+ +V   +  +++TE   N  + +E M +I+FE +   A+       LS +   R        I++DSG   +H VP         AI+R+++ G+ LT+ L +I++ R        E  ++  +KE + YV  D+ ++++ A      ++V  +Y LP
Sbjct:    4 LVLDNGAYNAKIGYSHENV--SVIPNCQFRSKTARLKTFTANQI----DEIKDPSGLFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYRDMDIAKLKGEENTVMIDYVLP 239          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ARP7_YEAST (Actin-related protein 7 OS=Saccharomyces cerevisiae GN=ARP7 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.700e-13
Identity = 44/179 (24.58%), Postives = 84/179 (46.93%), Query Frame = 3
Query:  156 LVCDNGTGMVKAGFAGDDAPRAVFPS-IVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR---EKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 680
            +V  NG+    AGF+  + P+ + PS  + R    G    +      +   A+ + G          G+  NWD +E  W + +  +L+V+PEE P+++T    N K +    E+  ++ F+  NVP   + I+ +    + G+++  V+D G    +  PI +G  + +A++R    G
Sbjct:    8 VVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTDEGGEAEFIFGTYNMIDAAAEKRNGDEVYTLVDSQGLPYNWDALEMQWRYLYDTQLKVSPEELPLVITMPATNGKPDMAILERYYELAFDKLNVPVFQIVIEPLAIALSMGKSSAFVIDIGASGCNVTPIIDGIVVKNAVVRSKFGG 186          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ARP6_CAEEL (Actin-like protein C08B11.6 OS=Caenorhabditis elegans GN=C08B11.6 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 2.166e-12
Identity = 59/245 (24.08%), Postives = 111/245 (45.31%), Query Frame = 3
Query:  156 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKY--PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTT----GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQELETA---XXSSSVEKNYELP 863
            ++ DNG   +K G    ++PR V  SIV + +H        +K  +V  E +      +L Y  PIE G V NWD  ++IW  TF   + V      + LT+      A  +  ++I+F+ F    ++    + L    S +       +V+DSG   +       G  +  +++R+D+ G+ LT+ L   ++ R      + E  ++ + KE L +V  ++++ ++ A      ++  K Y +P
Sbjct:    6 IIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHE-------KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMP 239          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ARP5_DROPS (Actin-related protein 5 OS=Drosophila pseudoobscura pseudoobscura GN=Arp5 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 2.166e-12
Identity = 54/243 (22.22%), Postives = 113/243 (46.50%), Query Frame = 3
Query:  156 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT-----------GVMVGMGQK---DAYVGDEAQSKRGILT-LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSL--YASGR---TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQEL 815
            LV DNG+   + G+     P   F +++ +PR             G    +  +   +  VG++  +   +   LK P E  I++NW+  E+I+ + F  ++    E+   +P++LTEA  NP   R+ M++++FE + +PA+   I A+ S   Y + R   +  +++  G   +H +P+  G      + RL++ G  +   L+ ++  +  +         +  +  +  ++ +DY +EL
Sbjct:    8 LVIDNGSYECRVGWNNTKEPALRFRNVLTKPRKDRKKEAIPDTTDGAPTPVAAEVPAEIQVGNDITNIEAVRAHLKSPFERNIITNWNHQEQIFDYIF-TKMGFEGEQSIANPIVLTEALANPNFCRQNMSELLFECYGIPAVSYGIDALYSWEHYQNRRKKVSDALIISLGYSTTHVIPVLNGKLQLQHVRRLNVGGYHIITYLLCLMQMKYPVHLNAISISRMEKLVHEHCHIAVDYREEL 249          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ARP6_SCHPO (Actin-like protein arp6 OS=Schizosaccharomyces pombe GN=arp6 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.231e-12
Identity = 62/256 (24.22%), Postives = 111/256 (43.36%), Query Frame = 3
Query:  156 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEH--GIVSNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTG--------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQELETAXXS--SSVEKNYELP 863
            +V DNG   +KAGFAG        P+ + R +    +        ++G+E  +     TL++   H  G + +W     +W     N   + P   ++ +LLT+      +      Q++FE F   A      A L  +  G  T               +V+DSG   +H +P+ +      A+ R+D+ G+ LT+ L ++++ R Y      E  IV ++KE + YV  ++++++E       S +E  Y LP
Sbjct:    8 IVLDNGAYHIKAGFAGGKVVE--IPNCLTRSKDGNRL--------FLGNELANCNDFTTLQFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVLVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKY--NMMEETYIVNEIKESVCYVSQNFKEDMEICHEKPRSKLEICYALP 251          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ARP8_ORYSJ (Actin-related protein 8 OS=Oryza sativa subsp. japonica GN=ARP8 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11
Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 3
Query:  399 TFYNELRVAPEEHPVLLT----------EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQE 812
            T Y  ++V P   P+++            A  + K  R+ +  ++F+  NVPA+    QAVL+LYA+ RT+GIV++ G   +  VPI++G  +    +  +      LT  L +++ +R   F +      VR +KEKL YV  DYE E
Sbjct:  188 TIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFD-MNVPAVCSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKELMQQRNITFESL---YTVRTIKEKLCYVAADYEAE 332          
BLAST of CK934737 vs. ExPASy Swiss-Prot
Match: ARP8_ORYSI (Actin-related protein 8 OS=Oryza sativa subsp. indica GN=ARP8 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.404e-11
Identity = 47/149 (31.54%), Postives = 76/149 (51.01%), Query Frame = 3
Query:  399 TFYNELRVAPEEHPVLLT----------EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYVVLDYEQE 812
            T Y  ++V P   P+++            A  + K  R+ +  ++F+  NVPA+    QAVL+LYA+ RT+GIV++ G   +  VPI++G  +    +  +      LT  L +++ +R   F +      VR +KEKL YV  DYE E
Sbjct:  188 TIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFD-MNVPAVCSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKELMQQRNITFESL---YTVRTIKEKLCYVAADYEAE 332          
The following BLAST results are available for this feature:
BLAST of CK934737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 480
Match NameE-valueIdentityDescription
ARP10_BOVIN1.959e-1325.00Actin-related protein 10 OS=Bos taurus GN=ACTR10 P... [more]
ARP5_DROME2.559e-1320.83Actin-related protein 5 OS=Drosophila melanogaster... [more]
ARP4_CANAL2.559e-1322.28Actin-related protein 4 OS=Candida albicans GN=ARP... [more]
ARP6_HUMAN3.342e-1324.90Actin-related protein 6 OS=Homo sapiens GN=ACTR6 P... [more]
ARP7_YEAST5.700e-1324.58Actin-related protein 7 OS=Saccharomyces cerevisia... [more]
ARP6_CAEEL2.166e-1224.08Actin-like protein C08B11.6 OS=Caenorhabditis eleg... [more]
ARP5_DROPS2.166e-1222.22Actin-related protein 5 OS=Drosophila pseudoobscur... [more]
ARP6_SCHPO8.231e-1224.22Actin-like protein arp6 OS=Schizosaccharomyces pom... [more]
ARP8_ORYSJ1.404e-1131.54Actin-related protein 8 OS=Oryza sativa subsp. jap... [more]
ARP8_ORYSI1.404e-1131.54Actin-related protein 8 OS=Oryza sativa subsp. ind... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_D01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934737 ID=CK934737; Name=CK934737; organism=Citrus sinensis; type=EST; length=864bp
GGGGACTACTACATTTTTAATCTCTCGGCAGTACCAAATACAGAGCGATA
GAGAGAATCGACACTCTCAGCTAGACTCCATCTTCGAATTTTTCTCTCGT
CGTCTCTTCAATCTAACTTTTATAAAAAATGGCCGATGCTGAGGATATTC
AACCCCTTGTTTGTGACAATGGAACTGGAATGGTGAAGGCTGGATTTGCT
GGAGATGATGCTCCAAGGGCAGTATTCCCTAGTATTGTTGGTAGGCCTCG
ACACACTGGAGTCATGGTTGGAATGGGGCAGAAGGATGCCTATGTTGGTG
ATGAGGCCCAATCGAAAAGAGGTATTCTTACTTTGAAATACCCAATTGAG
CACGGTATTGTAAGCAACTGGGATGATATGGAAAAGATCTGGCATCATAC
CTTCTACAACGAGCTTCGTGTTGCTCCTGAAGAGCACCCAGTGCTTCTCA
CTGAGGCACCTCTTAACCCCAAGGCCAACAGAGAGAAGATGACCCAAATT
ATGTTTGAAACTTTCAATGTGCCAGCCATGTACGTTGCCATCCAGGCTGT
TCTATCTCTTTATGCCAGTGGTCGTACAACTGGTATTGTGCTGGATTCTG
GTGATGGTGTGTCTCATACTGTACCAATTTATGAGGGATATGCCCTTCCT
CATGCCATTCTTCGTTTGGACTTGGCTGGTCGTGATCTCACTGATGCATT
GATGAAGATTCTTACTGAGAGAGGTTACATGTTTACCACCACAGCCGAAC
GGGAAATTGTCCGTGACATGAAGGAGAAGCTTGCTTATGTTGTCCTAGAC
TATGAGCAAGAACTTGAGACTGCCNNNNGCAGCTCATCTGTTGAGAAGAA
CTATGAGCTGCCTG
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