CK934739

Overview
NameCK934739
Unique NameCK934739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1G_MACFA (Protein phosphatase 1G OS=Macaca fascicularis GN=PPM1G PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.077e-31
Identity = 72/136 (52.94%), Postives = 97/136 (71.32%), Query Frame = 3
Query:   12 EVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETK------LSVICEKVFDRCLAP--SAGGEGCDNMTMILVQFK 392
            EVE  RI  AGG + + GRVNG LNL+RAIGD  +K NK+LP E+Q+++A PDI  + L DD EF+VIACDGIW+ +SSQE+VDF++ +++   +      LS I E++ D+CLAP  S  G GCDNMT I++ FK
Sbjct:  372 EVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK 507          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1G_HUMAN (Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.077e-31
Identity = 72/136 (52.94%), Postives = 97/136 (71.32%), Query Frame = 3
Query:   12 EVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETK------LSVICEKVFDRCLAP--SAGGEGCDNMTMILVQFK 392
            EVE  RI  AGG + + GRVNG LNL+RAIGD  +K NK+LP E+Q+++A PDI  + L DD EF+VIACDGIW+ +SSQE+VDF++ +++   +      LS I E++ D+CLAP  S  G GCDNMT I++ FK
Sbjct:  371 EVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK 506          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1G_MOUSE (Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE=2 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 2.399e-31
Identity = 71/136 (52.21%), Postives = 97/136 (71.32%), Query Frame = 3
Query:   12 EVEKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETK------LSVICEKVFDRCLAP--SAGGEGCDNMTMILVQFK 392
            EVE  RI  AGG + + GRVNG LNL+RAIGD  +K NK+LP ++Q+++A PDI  + L DD EF+VIACDGIW+ +SSQE+VDF++ +++   +      LS I E++ D+CLAP  S  G GCDNMT I++ FK
Sbjct:  368 EVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPQEQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK 503          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PP2C1_CAEEL (Probable protein phosphatase 2C F42G9.1 OS=Caenorhabditis elegans GN=F42G9.1 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.525e-30
Identity = 65/132 (49.24%), Postives = 89/132 (67.42%), Query Frame = 3
Query:   12 EVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGE--GCDNMTMILVQFKNAS 401
            EVE +RI  AGG I+ GRVNG LNL+RA GD  +K N+ L  ++Q++TA PD+    L  +DEF+V+ACDGIW+ + SQ++VDFVRD L   +  + +C+ + D CLA S  G+  GCDNMT+I   F   S
Sbjct:  359 EVETNRIHAAGGQIEDGRVNGGLNLSRAFGDHAYKKNQELGLKEQMITALPDVKIEALTPEDEFIVVACDGIWNSMESQQVVDFVRDLLAKGSSCAEVCDALCDACLADSTDGDGTGCDNMTVICTTFDRKS 490          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PP2C6_PARTE (Probable protein phosphatase 2C 6 OS=Paramecium tetraurelia GN=GSPATT00019634001 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.609e-27
Identity = 59/130 (45.38%), Postives = 87/130 (66.92%), Query Frame = 3
Query:    6 DLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAG-GEGCDNMTMILVQFK 392
            D E EK RI +AGGF+  GRVNG+L+L+RA+GD+E+K +     E+QI+TA PD+   +L   D+FL++ CDG+++    Q++++F+  +L N   L    EK+ D+ LA     G GCDNMT IL+QFK
Sbjct:  166 DDEQEKKRIERAGGFVSDGRVNGNLSLSRALGDLEYKKDNRFKPEEQIITALPDVKVTQLSAADKFLLMGCDGVFETWDHQQILNFINSELKNTQNLQKAAEKLLDQLLAKDTSLGTGCDNMTCILIQFK 295          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PP2C2_YEAST (Protein phosphatase 2C homolog 2 OS=Saccharomyces cerevisiae GN=PTC2 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.745e-27
Identity = 65/128 (50.78%), Postives = 85/128 (66.41%), Query Frame = 3
Query:    9 LEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL-CDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGE--GCDNMTMILV 383
            L  EK RI+ A GF+++ RVNG+L L+RAIGD EFK N  L  E+QIVT  PDI    L  D DEF+++ACDGIWDCL+SQ+ VD V   L     L+ I  ++ D C AP+  G   GCDNM++++V
Sbjct:  163 LASEKSRIVAADGFVEMDRVNGNLALSRAIGDFEFKSNPKLGPEEQIVTCVPDILEHSLDYDRDEFVILACDGIWDCLTSQDCVDLVHLGLREGKTLNEISSRIIDVCCAPTTEGTGIGCDNMSIVVV 290          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PP2C3_YEAST (Protein phosphatase 2C homolog 3 OS=Saccharomyces cerevisiae GN=PTC3 PE=1 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 1.153e-25
Identity = 62/126 (49.21%), Postives = 84/126 (66.67%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIEL-CDDDEFLVIACDGIWDCLSSQELVDFVRDQLT-NETKLSVICEKVFDRCLAPSAGGE--GCDNMTMILV 383
            EK RI+ A GF+++ RVNG+L L+RAIGD EFK N  L   +Q+VT  PDI    L  D+DEF+++ACDGIWDCL+SQE VD V   ++     LS I  ++ D C +P+  G   GCDNM++ +V
Sbjct:  166 EKSRIVAADGFVEMDRVNGNLALSRAIGDFEFKSNTKLGPHEQVVTCVPDIICHNLNYDEDEFVILACDGIWDCLTSQECVDLVHYGISQGNMTLSDISSRIVDVCCSPTTEGSGIGCDNMSISIV 291          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PP2C5_PARTE (Probable protein phosphatase 2C 5 OS=Paramecium tetraurelia GN=GSPATT00010582001 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.569e-25
Identity = 56/130 (43.08%), Postives = 85/130 (65.38%), Query Frame = 3
Query:    6 DLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAG-GEGCDNMTMILVQFK 392
            D + EK RI +AGGF+  GR NG+L+L+RA+GD+E+K +     E+QI++A PD+   +L   D+FL++ CDG+++    Q++++FV  +L +   L    EK+ D+ LA     G GCDNMT ILV FK
Sbjct:  166 DDDQEKKRIERAGGFVSDGRANGNLSLSRALGDLEYKKDSRFKPEEQIISALPDVKVTQLTASDKFLLMGCDGVFETWDHQQILNFVNQELKSSQNLQKATEKLLDQLLAKDTSLGTGCDNMTCILVLFK 295          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PP2C4_PARTE (Probable protein phosphatase 2C 4 OS=Paramecium tetraurelia GN=GSPATT00020181001 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.356e-25
Identity = 55/130 (42.31%), Postives = 87/130 (66.92%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNE----TKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFK 392
            EK RI +AGGF+  GRVNG+LNL+RA+GD+E+K +  L + +Q++ A PDI  +EL   D+FL++ CDG+++ L  Q+L+ F+  +L N+      L  + E + D  +AP ++ G GCDNMT +++  K
Sbjct:  170 EKSRIERAGGFVSDGRVNGNLNLSRALGDLEYKRDSKLRSNEQLIIALPDIKKVELNQTDKFLLMGCDGVFETLDHQDLLKFINQKLGNQQITPQLLGRVAEDLLDNLIAPDTSAGTGCDNMTTLIIYLK 299          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PP2C3_PARTE (Probable protein phosphatase 2C 3 OS=Paramecium tetraurelia GN=GSPATT00031056001 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.356e-25
Identity = 61/134 (45.52%), Postives = 86/134 (64.18%), Query Frame = 3
Query:    6 DLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTN----ETKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFK 392
            D   EK RI +AGGF+  GRVNG+LNL+RA+GD+E+K +  L   +Q++ A PD+   EL   D+F+++ CDG+++ L+ QEL+  V   L N    E  LS   E + D+ LAP ++ G GCDNMT ILV  K
Sbjct:  166 DNNEEKSRIERAGGFVSDGRVNGNLNLSRALGDLEYKSDSKLRPNEQLIIAFPDVKKTELTPQDKFILMGCDGVFETLNHQELLKHVNTTLGNSPVTENLLSKAAEDLLDQLLAPDTSQGTGCDNMTTILVYLK 299          
The following BLAST results are available for this feature:
BLAST of CK934739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
PPM1G_MACFA1.077e-3152.94Protein phosphatase 1G OS=Macaca fascicularis GN=P... [more]
PPM1G_HUMAN1.077e-3152.94Protein phosphatase 1G OS=Homo sapiens GN=PPM1G PE... [more]
PPM1G_MOUSE2.399e-3152.21Protein phosphatase 1G OS=Mus musculus GN=Ppm1g PE... [more]
PP2C1_CAEEL4.525e-3049.24Probable protein phosphatase 2C F42G9.1 OS=Caenorh... [more]
PP2C6_PARTE1.609e-2745.38Probable protein phosphatase 2C 6 OS=Paramecium te... [more]
PP2C2_YEAST2.745e-2750.78Protein phosphatase 2C homolog 2 OS=Saccharomyces ... [more]
PP2C3_YEAST1.153e-2549.21Protein phosphatase 2C homolog 3 OS=Saccharomyces ... [more]
PP2C5_PARTE2.569e-2543.08Probable protein phosphatase 2C 5 OS=Paramecium te... [more]
PP2C4_PARTE3.356e-2542.31Probable protein phosphatase 2C 4 OS=Paramecium te... [more]
PP2C3_PARTE3.356e-2545.52Probable protein phosphatase 2C 3 OS=Paramecium te... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004227_D03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934739 ID=CK934739; Name=CK934739; organism=Citrus sinensis; type=EST; length=685bp
GGGCTGATCTTGAGGTTGAGAAAGATAGAATTCTCAAAGCTGGTGGTTTT
ATACAAGTTGGACGTGTTAATGGAAGTTTAAATTTGGCGAGAGCTATTGG
AGATGTGGAGTTCAAGCTAAACAAAAGTTTGCCTGCTGAAAAACAGATTG
TGACTGCCAATCCTGATATAAGTACTATTGAACTTTGTGATGACGATGAG
TTTCTTGTCATAGCTTGTGATGGGATTTGGGATTGCCTTTCAAGTCAAGA
ACTTGTCGATTTTGTCAGGGATCAGTTAACCAACGAAACAAAACTATCAG
TCATTTGCGAGAAAGTATTCGATCGGTGCTTGGCTCCATCAGCTGGTGGT
GAAGGATGTGACAACATGACCATGATCTTGGTTCAGTTTAAAAATGCTTC
TAATAATGGTCCTTCTGCGGCTGAGCAGCCACCATCATCTGACCAACAAT
CCAAGTTAGCCAGCAGTTCCACAGGGACTGAATCGAATTAGCTGTAGCAC
TCTTTGCACTGACTAAATGGTACTCATTTTCTACTGTCTGAAACACTGCT
GAGCTCAAGAACCATGGTCCCTGATTTTACATTTGGAAAACGATTCTCAT
GATTTGGTTGTAAATATTTAAGCTTTTTCATTTTAATGGGATAGATAATC
CTTAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top