CK934739

Overview
NameCK934739
Unique NameCK934739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C42_ORYSJ (Probable protein phosphatase 2C 42 OS=Oryza sativa subsp. japonica GN=Os04g0500900 PE=2 SV=4)

HSP 1 Score: 114.005 bits (284), Expect = 7.476e-25
Identity = 60/134 (44.78%), Postives = 85/134 (63.43%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVGR----VNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNN 407
            E  RI+ AGG +   R    VN  + ++RAIGD+ +K NK L  E+Q++T +P+I   +L DD EFLVIACDG+WD L++Q +VDFVR  L N  +LSVICE +    +  +      DNM++ILV+F +   N
Sbjct:  196 ETQRIVAAGGSVSFSRGSHRVNNGIAVSRAIGDLSYKNNKKLRPEQQLLTCSPEIRADQLTDDTEFLVIACDGVWDVLANQAVVDFVRLHLNNGVELSVICESLLQEAI--TRDPPSTDNMSVILVRFLHPEGN 327          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1A_RABIT (Protein phosphatase 1A OS=Oryctolagus cuniculus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24
Identity = 56/139 (40.29%), Postives = 87/139 (62.59%), Query Frame = 3
Query:   15 VEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAAEQ 428
            +EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  IE  + DD+F+++ACDGIWD + ++EL DFVR +L     L  +C +V D CL   +     DNM++IL+ F NA    P A ++
Sbjct:  170 LEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSR----DNMSVILICFPNAPKVSPEAVKK 304          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1A_HUMAN (Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24
Identity = 56/139 (40.29%), Postives = 87/139 (62.59%), Query Frame = 3
Query:   15 VEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAAEQ 428
            +EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  IE  + DD+F+++ACDGIWD + ++EL DFVR +L     L  +C +V D CL   +     DNM++IL+ F NA    P A ++
Sbjct:  170 LEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSR----DNMSVILICFPNAPKVSPEAVKK 304          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1A_BOVIN (Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.710e-24
Identity = 56/139 (40.29%), Postives = 87/139 (62.59%), Query Frame = 3
Query:   15 VEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAAEQ 428
            +EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  IE  + DD+F+++ACDGIWD + ++EL DFVR +L     L  +C +V D CL   +     DNM++IL+ F NA    P A ++
Sbjct:  170 LEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSR----DNMSVILICFPNAPKVSPEAVKK 304          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PP2C2_PARTE (Probable protein phosphatase 2C 2 OS=Paramecium tetraurelia GN=GSPATT00030171001 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.410e-23
Identity = 57/130 (43.85%), Postives = 83/130 (63.85%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL----TNETKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFK 392
            EK RI +AGGF+  GRVNG+LNL+RA+GD+E+K +  L   +Q++ A PD+  +EL   D+FL++ CDG+++ L+  +L+  V   L      E  L    E + D+ LAP ++ G GCDNMT ILV  K
Sbjct:  170 EKSRIERAGGFVSDGRVNGNLNLSRALGDLEYKRDSKLRVNEQLIIAIPDVKKVELGPQDKFLLLGCDGVFETLNHMDLLKQVNSTLGQAQVTEELLRKAAEDLLDQLLAPDTSQGTGCDNMTTILVYLK 299          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PP2C1_PARTE (Protein phosphatase 2C 1 OS=Paramecium tetraurelia GN=GSPATT00029903001 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.410e-23
Identity = 56/130 (43.08%), Postives = 84/130 (64.62%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL----TNETKLSVICEKVFDRCLAP-SAGGEGCDNMTMILVQFK 392
            EK RI +AGGF+  GRVNG+LNL+RA+GD+E+K +  L + +Q++ A PD+   EL   D+F+++ CDG+++ L+ QEL+  V   +      E  L    E + D+ LAP ++ G GCDNMT ILV  +
Sbjct:  170 EKSRIERAGGFVSDGRVNGNLNLSRALGDLEYKRDNKLRSNEQLIIALPDVKKTELTPQDKFILMGCDGVFETLNHQELLKQVNSTIGQAQVTEELLKKAAEDLLDQLLAPDTSQGTGCDNMTTILVYLR 299          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.405e-23
Identity = 55/138 (39.86%), Postives = 85/138 (61.59%), Query Frame = 3
Query:   15 VEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAAEQ 428
            VEK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  I   ++DEF+V+ACDGIWD +S++EL +FV+ +L     L  +C  V D CL   +     DNM+++LV F NA      A ++
Sbjct:  175 VEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDVMSNEELCEFVKSRLEVSDDLENVCNWVVDTCLHKGSR----DNMSVVLVCFSNAPKVSEEAVKR 308          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1A_RAT (Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.141e-23
Identity = 55/139 (39.57%), Postives = 86/139 (61.87%), Query Frame = 3
Query:   15 VEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAAEQ 428
            +EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  IE  + DD+F+++ACDGIWD + ++EL DFVR +L     L  +C +V D CL   +     DNM++IL+ F NA      A ++
Sbjct:  170 LEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSR----DNMSVILICFPNAPKVSAEAVKK 304          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1B_BOVIN (Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.193e-22
Identity = 52/127 (40.94%), Postives = 81/127 (63.78%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNA 398
            EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  I   ++DEF+++ACDGIWD +S++EL +FV+ +L     L  +C  V D CL   +     DNM+++LV F NA
Sbjct:  176 EKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEFVKSRLEVSDDLENVCNWVVDTCLHKGSR----DNMSIVLVCFSNA 298          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1A_MOUSE (Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.193e-22
Identity = 54/139 (38.85%), Postives = 86/139 (61.87%), Query Frame = 3
Query:   15 VEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAAEQ 428
            +EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  IE  + DD+F+++ACDGIWD + ++EL DFVR +L     L  +C +V D CL   +     DNM++IL+ F +A      A ++
Sbjct:  170 LEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSR----DNMSVILICFPSAPKVSAEAVKK 304          
The following BLAST results are available for this feature:
BLAST of CK934739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
P2C42_ORYSJ7.476e-2544.78Probable protein phosphatase 2C 42 OS=Oryza sativa... [more]
PPM1A_RABIT3.710e-2440.29Protein phosphatase 1A OS=Oryctolagus cuniculus GN... [more]
PPM1A_HUMAN3.710e-2440.29Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE... [more]
PPM1A_BOVIN3.710e-2440.29Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2... [more]
PP2C2_PARTE1.410e-2343.85Probable protein phosphatase 2C 2 OS=Paramecium te... [more]
PP2C1_PARTE1.410e-2343.08Protein phosphatase 2C 1 OS=Paramecium tetraurelia... [more]
PPM1B_MOUSE2.405e-2339.86Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
PPM1A_RAT3.141e-2339.57Protein phosphatase 1A OS=Rattus norvegicus GN=Ppm... [more]
PPM1B_BOVIN1.193e-2240.94Protein phosphatase 1B OS=Bos taurus GN=PPM1B PE=2... [more]
PPM1A_MOUSE1.193e-2238.85Protein phosphatase 1A OS=Mus musculus GN=Ppm1a PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_D03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934739 ID=CK934739; Name=CK934739; organism=Citrus sinensis; type=EST; length=685bp
GGGCTGATCTTGAGGTTGAGAAAGATAGAATTCTCAAAGCTGGTGGTTTT
ATACAAGTTGGACGTGTTAATGGAAGTTTAAATTTGGCGAGAGCTATTGG
AGATGTGGAGTTCAAGCTAAACAAAAGTTTGCCTGCTGAAAAACAGATTG
TGACTGCCAATCCTGATATAAGTACTATTGAACTTTGTGATGACGATGAG
TTTCTTGTCATAGCTTGTGATGGGATTTGGGATTGCCTTTCAAGTCAAGA
ACTTGTCGATTTTGTCAGGGATCAGTTAACCAACGAAACAAAACTATCAG
TCATTTGCGAGAAAGTATTCGATCGGTGCTTGGCTCCATCAGCTGGTGGT
GAAGGATGTGACAACATGACCATGATCTTGGTTCAGTTTAAAAATGCTTC
TAATAATGGTCCTTCTGCGGCTGAGCAGCCACCATCATCTGACCAACAAT
CCAAGTTAGCCAGCAGTTCCACAGGGACTGAATCGAATTAGCTGTAGCAC
TCTTTGCACTGACTAAATGGTACTCATTTTCTACTGTCTGAAACACTGCT
GAGCTCAAGAACCATGGTCCCTGATTTTACATTTGGAAAACGATTCTCAT
GATTTGGTTGTAAATATTTAAGCTTTTTCATTTTAATGGGATAGATAATC
CTTAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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