CK934739

Overview
NameCK934739
Unique NameCK934739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.559e-22
Identity = 54/138 (39.13%), Postives = 84/138 (60.87%), Query Frame = 3
Query:   15 VEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAAEQ 428
            +EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  I   ++DEF+V+ACDGIWD +S++EL +FV  +L     L  +C  V D CL   +     DNM+++LV F NA      A ++
Sbjct:  175 MEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFVVLACDGIWDVMSNEELCEFVNSRLEVSDDLENVCNWVVDTCLHKGSR----DNMSIVLVCFANAPKVSDEAVKR 308          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1B_HUMAN (Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.036e-22
Identity = 52/137 (37.96%), Postives = 84/137 (61.31%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAAEQ 428
            EK+RI  AGG + + RVNGSL ++RA+GD ++K        +Q+V+  P++  I   ++DEF+++ACDGIWD +S++EL ++V+ +L     L  +C  V D CL   +     DNM+++LV F NA      A ++
Sbjct:  176 EKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHKGSR----DNMSIVLVCFSNAPKVSDEAVKK 308          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.736e-22
Identity = 56/128 (43.75%), Postives = 78/128 (60.94%), Query Frame = 3
Query:   12 EVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQL-TNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 392
            E E++RI +AGG + + R+ G L  +RAIGD  +K N+++P  +Q+VT  PDI    + DD EFLVIA DG+WD + +  +V FVR +L   E  L   CEK+   CL  +      DN T ILV+FK
Sbjct:  185 EAERERIQRAGGHVFLQRILGMLATSRAIGDFAYKQNRNMPPSQQMVTCVPDIRVENITDDTEFLVIASDGVWDGMRNNNVVQFVRQELRPGEENLRETCEKLVGHCLHSN------DNATAILVKFK 306          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.693e-19
Identity = 48/127 (37.80%), Postives = 76/127 (59.84%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNA 398
            E++RI  AGG ++  RV GSL ++RA+GD  +K     P E Q+V+A P+++ +   D+DEF+++A DG+WD LS  +L   V  +L     L ++C ++ D CL   +     DNMT ++V F  A
Sbjct:  200 ERERIHDAGGTVRRRRVEGSLAVSRALGDFAYKQAPGRPPELQLVSAEPEVAALARQDEDEFVLLASDGVWDALSGADLAGLVTSRLRLGLDLELLCAQLLDTCLCKGS----LDNMTCMVVCFPGA 322          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C16_ORYSJ (Probable protein phosphatase 2C 16 OS=Oryza sativa subsp. japonica GN=Os02g0598400 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.329e-18
Identity = 49/113 (43.36%), Postives = 72/113 (63.72%), Query Frame = 3
Query:   57 VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNE-TKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 392
            +G   G + ++R+IGD  FK NK L  EKQ++  +PDI   ++ DD EFLVIA  G+W C+ S ++V ++ D+L+ E  +L VICE+V +  LA        +N T+ILVQFK
Sbjct:  222 LGDFGGGVTISRSIGDFAFKKNKDLDREKQMLVCDPDILADDITDDMEFLVIASQGLWSCVDSADVVSYIHDRLSVEGAELRVICEEVVEFGLASG------ENTTVILVQFK 328          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.575e-17
Identity = 48/127 (37.80%), Postives = 73/127 (57.48%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNA 398
            E++RI  AGG I+  RV GSL ++RA+GD  +K     P E Q+V+A P+++ +    +DEF+++A DG+WD +S   L   V  +L       ++C ++ D CL   +     DNMT ILV F  A
Sbjct:  207 ERERIHAAGGTIRRRRVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTVSGAALAGLVASRLRLGLAPELLCAQLLDTCLCKGS----LDNMTCILVCFPGA 329          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 56/147 (38.10%), Postives = 82/147 (55.78%), Query Frame = 3
Query:    6 DLEVEKDRILKAGGFIQ-------VGR-----------VNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 392
            D E E++R+  AGG          +GR             G ++++R+IGD   K N+ LP E Q++T NPDI T+++ DD EFLVIA +G+W  +++Q +VD   D+L    +  VICE++    L PS      DN T+ILV FK
Sbjct:  234 DSESERERVQNAGGVAVGYSYRKIMGRWVTKKQWGFTDFKGRVSISRSIGDFACKKNERLPPEDQMLTCNPDILTMDITDDMEFLVIATEGLWCNMTNQNVVDHTHDRLLEGAEARVICEELVQFGL-PSG-----DNTTVILVLFK 374          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C18_ORYSJ (Probable protein phosphatase 2C 18 OS=Oryza sativa subsp. japonica GN=Os02g0599200 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.180e-16
Identity = 51/145 (35.17%), Postives = 77/145 (53.10%), Query Frame = 3
Query:   12 EVEKDRILKAGGFIQ------------------VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFK 392
            E E++R+  AGG                     +G    S+ ++R+IGD  FK NK L  E+Q++  +PDI T ++  D EFLVIA  G+W C+ S ++V ++  +L    +L VICE++    LA        +N T+ILVQFK
Sbjct:  297 ESERERVQNAGGISLGVDCEKVMENYVIKEQWILGYFGESVTISRSIGDFAFKQNKDLNREEQMLICDPDIHTHDITGDMEFLVIASQGLWSCMESADVVAYIHVRLLEGVELRVICEELVQSGLASG------ENTTVILVQFK 435          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C57_ORYSJ (Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.847e-16
Identity = 45/126 (35.71%), Postives = 72/126 (57.14%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKN 395
            EK RI  +GG++  G +NG LN+ARAIGD   +  K+      + +A P++    L ++DEFL+I CDGIWD   SQ  VDF R +L         C+++ D  +   +G    DN++++++ F +
Sbjct:  213 EKVRIEASGGYVYDGYLNGQLNVARAIGDWHMEGMKACDGLGPL-SAEPEVMIRNLTEEDEFLIIGCDGIWDVFRSQNAVDFARRKLQEHNDPVTCCKELVDEAIKRKSG----DNLSVVVICFNS 333          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.343e-16
Identity = 43/124 (34.68%), Postives = 68/124 (54.84%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 389
            E+ RI   GG++  G +NG L + RA+GD   +  K +      ++A P++  I L  +DEFL+I  DGIWD  S+Q  VDF R +L     L + C+++ +  +   A     DN+T ++V F
Sbjct:  200 ERKRIESLGGYVDDGYLNGQLAVTRALGDWHLEGLKEVGEPGGPLSAEPELKMITLTKEDEFLIIGSDGIWDFFSNQNAVDFTRKRLQEHNDLRLCCKQIVEEAIRRGAS----DNLTAVMVSF 319          
The following BLAST results are available for this feature:
BLAST of CK934739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
PPM1B_RAT1.559e-2239.13Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
PPM1B_HUMAN2.036e-2237.96Protein phosphatase 1B OS=Homo sapiens GN=PPM1B PE... [more]
P2C21_ORYSJ7.736e-2243.75Probable protein phosphatase 2C 21 OS=Oryza sativa... [more]
PPMBL_MOUSE4.693e-1937.80Probable protein phosphatase 1B-like OS=Mus muscul... [more]
P2C16_ORYSJ2.329e-1843.36Probable protein phosphatase 2C 16 OS=Oryza sativa... [more]
PPMBL_HUMAN2.575e-1737.80Probable protein phosphatase 1B-like OS=Homo sapie... [more]
P2C20_ORYSJ5.737e-1738.10Probable protein phosphatase 2C 20 OS=Oryza sativa... [more]
P2C18_ORYSJ2.180e-1635.17Probable protein phosphatase 2C 18 OS=Oryza sativa... [more]
P2C57_ORYSJ2.847e-1635.71Probable protein phosphatase 2C 57 OS=Oryza sativa... [more]
P2C27_ORYSJ6.343e-1634.68Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_D03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934739 ID=CK934739; Name=CK934739; organism=Citrus sinensis; type=EST; length=685bp
GGGCTGATCTTGAGGTTGAGAAAGATAGAATTCTCAAAGCTGGTGGTTTT
ATACAAGTTGGACGTGTTAATGGAAGTTTAAATTTGGCGAGAGCTATTGG
AGATGTGGAGTTCAAGCTAAACAAAAGTTTGCCTGCTGAAAAACAGATTG
TGACTGCCAATCCTGATATAAGTACTATTGAACTTTGTGATGACGATGAG
TTTCTTGTCATAGCTTGTGATGGGATTTGGGATTGCCTTTCAAGTCAAGA
ACTTGTCGATTTTGTCAGGGATCAGTTAACCAACGAAACAAAACTATCAG
TCATTTGCGAGAAAGTATTCGATCGGTGCTTGGCTCCATCAGCTGGTGGT
GAAGGATGTGACAACATGACCATGATCTTGGTTCAGTTTAAAAATGCTTC
TAATAATGGTCCTTCTGCGGCTGAGCAGCCACCATCATCTGACCAACAAT
CCAAGTTAGCCAGCAGTTCCACAGGGACTGAATCGAATTAGCTGTAGCAC
TCTTTGCACTGACTAAATGGTACTCATTTTCTACTGTCTGAAACACTGCT
GAGCTCAAGAACCATGGTCCCTGATTTTACATTTGGAAAACGATTCTCAT
GATTTGGTTGTAAATATTTAAGCTTTTTCATTTTAATGGGATAGATAATC
CTTAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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