CK934739

Overview
NameCK934739
Unique NameCK934739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length685
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C47_ARATH (Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.947e-13
Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNASNNGPSAAEQP 431
            E+ RI K GG I  G +NG L++ARA+GD   K  K        ++  P++  I L ++DE+L++ CDG+WD +SSQ  V  VR +L          + +    L  ++    CDN+T+++V F   S   P   E P
Sbjct:  211 ERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGTKGSLCP---LSCEPELEEIVLTEEDEYLIMGCDGLWDVMSSQCAVTMVRRELMQHNDPERCSQALVKEALQRNS----CDNLTVVVVCF---SPEAPPRIEIP 338          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.564e-13
Identity = 47/126 (37.30%), Postives = 68/126 (53.97%), Query Frame = 3
Query:   15 VEKDRILKAGGFI-QVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 389
            +E+ R+ ++GGFI   G +N  L + RA+GD + KL       +  + + P+I  I L +DDEFLVI CDGIWD L+SQE V  VR  L      +    ++    L    G    DN+T ++V F
Sbjct:  231 LERRRVEESGGFITNDGYLNEVLAVTRALGDWDLKLPHG---SQSPLISEPEIKQITLTEDDEFLVIGCDGIWDVLTSQEAVSIVRRGLNRHNDPTRCARELVMEAL----GRNSFDNLTAVVVCF 349          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12
Identity = 50/147 (34.01%), Postives = 77/147 (52.38%), Query Frame = 3
Query:    6 DLEVEKDRILKAGGFIQ---VGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF---KNASNNGPSAAEQ 428
            D   E++RI  AGGF+      RV G L ++RA GD   K         Q V A+P+I   ++ D  EFL++A DG+WD  S++E V  V++    E     +  +   R  A        DN+T ++V+F   K+A+NNG S++E+
Sbjct:  166 DQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLK---------QYVVADPEIQEEKIDDSLEFLILASDGLWDVFSNEEAVAVVKEVEDPEESTKKLVGEAIKRGSA--------DNITCVVVRFLESKSANNNGSSSSEE 295          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C47_ORYSJ (Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.258e-12
Identity = 43/129 (33.33%), Postives = 69/129 (53.49%), Query Frame = 3
Query:    3 ADLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQF 389
            A+   E +R+  +GG+I+ G +NG L++ RA+GD + K+     +    + A P+     L +DDEFL++ CDGIWD ++SQ  V  VR  L          E+     +  +   E  DN+T+I+V F
Sbjct:  225 ANYAEECERVAASGGYIEDGYLNGVLSVTRALGDWDMKMPDGSISP---LIAEPEFRQTMLTEDDEFLIMGCDGIWDVMTSQHAVSIVRRGLRQHDD----PERCARELVMEAKRLETADNLTVIVVCF 346          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1L_BOVIN (Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.617e-11
Identity = 44/134 (32.84%), Postives = 73/134 (54.48%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVG---RVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLSSQELVDFVRDQLTNE--TKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNAS 401
            E+ RI +AGGFI      RV G L ++R++GD   K          +V  +PDI T +L     EF+++A DG+WD  S++E V F++D+L        S++ +  +  C          DN+T+++V+F+N+S
Sbjct:  238 ERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLK-------NLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAVRFIKDRLDEPHFGAKSIVLQSFYRGC---------PDNITVMVVKFRNSS 355          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1L_MOUSE (Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 43/134 (32.09%), Postives = 73/134 (54.48%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVG---RVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLSSQELVDFVRDQLTNE--TKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNAS 401
            E+ RI +AGGFI      RV G L ++R++GD   K          +V  +PDI T +L     EF+++A DG+WD  S++E V F++++L        S++ +  +  C          DN+T+++V+F+N+S
Sbjct:  238 ERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLK-------NLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAVRFIKERLDEPHFGAKSIVLQSFYRGC---------PDNITVMVVKFRNSS 355          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: PPM1L_HUMAN (Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 43/134 (32.09%), Postives = 73/134 (54.48%), Query Frame = 3
Query:   18 EKDRILKAGGFIQVG---RVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCD-DDEFLVIACDGIWDCLSSQELVDFVRDQLTNE--TKLSVICEKVFDRCLAPSAGGEGCDNMTMILVQFKNAS 401
            E+ RI +AGGFI      RV G L ++R++GD   K          +V  +PDI T +L     EF+++A DG+WD  S++E V F++++L        S++ +  +  C          DN+T+++V+F+N+S
Sbjct:  238 ERKRIKRAGGFISFNGSWRVQGILAMSRSLGDYPLK-------NLNVVIPDPDILTFDLDKLQPEFMILASDGLWDAFSNEEAVRFIKERLDEPHFGAKSIVLQSFYRGC---------PDNITVMVVKFRNSS 355          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C67_ORYSJ (Probable protein phosphatase 2C 67 OS=Oryza sativa subsp. japonica GN=Os09g0314400 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 42/128 (32.81%), Postives = 70/128 (54.69%), Query Frame = 3
Query:   18 EKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGC-DNMTMILVQFKN 395
            E+ RI KAGG +   GR+ G + ++RA+GD +FK        K  + A PD+ + E+   D F+++ CDG+W      + V+FV++QL  ET  + +  +   R +  +     C DN T +L+ FK+
Sbjct:  252 ERARIQKAGGSVGPNGRLQGRIEVSRALGDRQFK--------KVGLIATPDVHSFEVTRKDHFIILGCDGLWGVFGPGDAVEFVQNQL-KETSSATLAVR---RLVKEAVRERRCKDNCTAVLIVFKH 367          
BLAST of CK934739 vs. ExPASy Swiss-Prot
Match: P2C08_ARATH (Probable protein phosphatase 2C 8 OS=Arabidopsis thaliana GN=At1g18030 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11
Identity = 43/127 (33.86%), Postives = 64/127 (50.39%), Query Frame = 3
Query:   18 EKDRILKAGGFIQV-GRVNGSLNLARAIGDVEFKLNKSLPAEKQIVTANPDISTIELCDDDEFLVIACDGIWDCLSSQELVDFVRDQLTNETKLSVICEKVFDRCLAPSAGGEGC-DNMTMILVQFK 392
            E+ RI K+GG I   GR+ G L ++RA GD  FK        K  V+A PDI   EL + + F+++ CDG+W+     + V FV+  L     +S +      R +  +     C DN T I++ FK
Sbjct:  235 ERSRIQKSGGVISSNGRLQGRLEVSRAFGDRHFK--------KFGVSATPDIHAFELTERENFMILGCDGLWEVFGPSDAVGFVQKLLKEGLHVSTVSR----RLVKEAVKERRCKDNCTAIVIVFK 349          
The following BLAST results are available for this feature:
BLAST of CK934739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
P2C47_ARATH2.947e-1334.06Probable protein phosphatase 2C 47 OS=Arabidopsis ... [more]
P2C49_ARATH6.564e-1337.30Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]
P2C71_ARATH3.258e-1234.01Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
P2C47_ORYSJ3.258e-1233.33Probable protein phosphatase 2C 47 OS=Oryza sativa... [more]
PPM1L_BOVIN1.617e-1132.84Protein phosphatase 1L OS=Bos taurus GN=PPM1L PE=2... [more]
PPM1L_MOUSE4.704e-1132.09Protein phosphatase 1L OS=Mus musculus GN=Ppm1l PE... [more]
PPM1L_HUMAN4.704e-1132.09Protein phosphatase 1L OS=Homo sapiens GN=PPM1L PE... [more]
P2C67_ORYSJ4.704e-1132.81Probable protein phosphatase 2C 67 OS=Oryza sativa... [more]
P2C08_ARATH6.144e-1133.86Probable protein phosphatase 2C 8 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_D03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934739 ID=CK934739; Name=CK934739; organism=Citrus sinensis; type=EST; length=685bp
GGGCTGATCTTGAGGTTGAGAAAGATAGAATTCTCAAAGCTGGTGGTTTT
ATACAAGTTGGACGTGTTAATGGAAGTTTAAATTTGGCGAGAGCTATTGG
AGATGTGGAGTTCAAGCTAAACAAAAGTTTGCCTGCTGAAAAACAGATTG
TGACTGCCAATCCTGATATAAGTACTATTGAACTTTGTGATGACGATGAG
TTTCTTGTCATAGCTTGTGATGGGATTTGGGATTGCCTTTCAAGTCAAGA
ACTTGTCGATTTTGTCAGGGATCAGTTAACCAACGAAACAAAACTATCAG
TCATTTGCGAGAAAGTATTCGATCGGTGCTTGGCTCCATCAGCTGGTGGT
GAAGGATGTGACAACATGACCATGATCTTGGTTCAGTTTAAAAATGCTTC
TAATAATGGTCCTTCTGCGGCTGAGCAGCCACCATCATCTGACCAACAAT
CCAAGTTAGCCAGCAGTTCCACAGGGACTGAATCGAATTAGCTGTAGCAC
TCTTTGCACTGACTAAATGGTACTCATTTTCTACTGTCTGAAACACTGCT
GAGCTCAAGAACCATGGTCCCTGATTTTACATTTGGAAAACGATTCTCAT
GATTTGGTTGTAAATATTTAAGCTTTTTCATTTTAATGGGATAGATAATC
CTTAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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