CK934746

Overview
NameCK934746
Unique NameCK934746
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.012e-36
Identity = 77/200 (38.50%), Postives = 108/200 (54.00%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVG-FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+   + RN         F+ Y +F+TA   +   GFGTTG    + +EI AFLA    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GRG I I  NYNYG  G A+  DLLN+P+ +  +  ++F++AIW WMTP +  +PS HD   G W+P+  D  + R P FG     + G   C
Sbjct:   81 FDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFP--GFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLEC 275          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 4.012e-36
Identity = 77/200 (38.50%), Postives = 109/200 (54.50%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVG-FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+   + RN       G F+ Y +FI+A   +   GFGTTG    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GRG I I  NYNYG  G A+  DLLN+P+ +  ++ ++F++AIW WMTP +  +PS HD   G W+P+  D  + R P FG     + G   C
Sbjct:   77 FDQMLNHRNDNACQGKGNFYSYNAFISAAGSFP--GFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLEC 271          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.240e-36
Identity = 72/199 (36.18%), Postives = 106/199 (53.27%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            FE     RN     A GF+ Y + +TA   +    F  TG    + +E+ AFL     +T+ G+  A  GP +WG C+  E+  + SYC  S ++  PC P  +Y+GRG I + +NYNYG  GEA+  DLLN+PE +  +  ++F+ A+W WMTP +  +PS HD   G W P+  D  + R P +G     + G   C
Sbjct:   95 FEQLLLHRNDAACPARGFYTYDALVTAAAAFPD--FAATGDDEARKREVAAFLGQTSHETTGGWATAPDGPYSWGYCFKEEIGATASYCVPSAEW--PCAPDKKYFGRGPIQLSYNYNYGPAGEAIGEDLLNNPELVASDPVVSFKTALWFWMTP-QSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLEC 288          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 8.938e-36
Identity = 77/200 (38.50%), Postives = 109/200 (54.50%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVG-FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+   + RN         F+ Y +FI+A   +   GFGTTG    + +EI AFLA    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GRG I I  NYNYG  G A+  DLLN+P+ +  ++ ++F++AIW WMTP +  +PS HD   G W+P+  D  + R P FG     + G   C
Sbjct:   77 FDQMLNHRNDNACQGKNNFYSYNAFISAAGSFP--GFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLEC 271          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.167e-35
Identity = 73/199 (36.68%), Postives = 106/199 (53.27%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+     RN     A GF+ Y +F+ A   +   GFGTTG+   + +E+ AFLA    +T+ G+  A  G  AWG C+  E   + +YC  S ++  PC PG  YYGRG I +  NYNYG  G A+  DLL +P+ +  + T++F+ A+W WMT  +  +PS+H    G W P+  D  + R P FG     + G   C
Sbjct:   89 FDRMLLHRNDGACQAKGFYTYDAFVAAAGAFP--GFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQW--PCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMT-AQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIEC 282          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4)

HSP 1 Score: 150.599 bits (379), Expect = 1.167e-35
Identity = 73/199 (36.68%), Postives = 106/199 (53.27%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+     RN     A GF+ Y +F+ A   ++  GFGTTG    + +E+ AFLA    +T+ G+  A  G  AWG C+  E   + +YC  S ++  PC PG  YYGRG I +  NYNYG  G A+  DLL +P+ +  + T++F+ A+W WMT  +  +PS+H    G W P+  D  + R P FG     + G   C
Sbjct:   86 FDRMLLHRNDGACQAKGFYTYDAFVAAASAFR--GFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQW--PCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMT-AQAPKPSSHAVITGQWSPSGTDRAAGRVPGFGVITNIVNGGIEC 279          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.525e-35
Identity = 73/209 (34.93%), Postives = 108/209 (51.67%), Query Frame = 2
Query:  284 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            ++S      QF+     RN     A GF+ Y +F+ A   +   GFG TG+   + +++ AFLA    +T+ G+  A  G  AWG C+  E   +  YC  S ++  PC PG  YYGRG I +  NYNYG  G A+  DLL +P+ +  + T++F+ A+W WMT  +  +PS+H    G W P+  D  + R P FG     + G   C
Sbjct:   24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFP--GFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQW--PCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTALWFWMT-AQAPKPSSHAVITGKWSPSGADRAAGRAPGFGVITNIINGGLEC 227          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.991e-35
Identity = 76/200 (38.00%), Postives = 106/200 (53.00%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVG-FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+     RN         F+ Y +FI A   +   GFGTTG    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GRG I I  NYNYG  G A+  DLLN+P+ +  +  ++F++AIW WMTP +  +PS HD  +G W+P+  D  + R P FG     + G   C
Sbjct:   87 FDQMLKHRNDNACQGKNNFYSYNAFINAARSFG--GFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTP-QSPKPSCHDVIIGRWQPSAADRAANRLPGFGVITNIINGGLEC 281          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 2.601e-35
Identity = 74/199 (37.19%), Postives = 104/199 (52.26%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+     RN        F+ Y +FI A   +   GFGT+G    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GRG I I  NYNYG  G A+  DLLN+P+ +  +  ++F+ A+W WMTP +  +PS HD  +G W P+  D  + R P FG     + G   C
Sbjct:   88 FDQMLKHRNENSCQGKNFYSYNAFINAARSFP--GFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTP-QSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLEC 281          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 4.436e-35
Identity = 80/208 (38.46%), Postives = 109/208 (52.40%), Query Frame = 2
Query:  287 ISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            +SD     +F+     RN     A GF+ Y +FI+A  ++    FG TG  L + +EI AFL     +T+ G+  A  GP AWG CY  E++  Q YCD S  Y   C  G +Y GRG I + WNYNYG  G+ LK  LL  PE +E +  ++F+ AIW WM P +  +PS H    GNW P+  D  + R P +G     + G   C
Sbjct:   89 LSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPD--FGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNYQ--CVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKP-QSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIEC 290          
The following BLAST results are available for this feature:
BLAST of CK934746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CHIC_SOLLC4.012e-3638.50Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI1_SOLTU4.012e-3638.50Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]
CHI9_ORYSJ5.240e-3636.18Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI3_SOLTU8.938e-3638.50Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]
CHIA_SECCE1.167e-3536.68Basic endochitinase A OS=Secale cereale GN=rsca PE... [more]
CHI1_HORVU1.167e-3536.6826 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=... [more]
CHIC_SECCE1.525e-3534.93Basic endochitinase C OS=Secale cereale GN=rscc PE... [more]
CHI4_SOLTU1.991e-3538.00Endochitinase 4 (Fragment) OS=Solanum tuberosum GN... [more]
CHIT_SOLTU2.601e-3537.19Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]
CHI6_POPTR4.436e-3538.46Acidic endochitinase WIN6 OS=Populus trichocarpa G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_C04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934746 ID=CK934746; Name=CK934746; organism=Citrus sinensis; type=EST; length=912bp
GGGGGACGCTGCATCCGCCTTGTCAAATCCCTTGCTTCCCATTTCTCTCA
TCTTCCCCCAAGTGAATCTCGAAACAACAGGTAGATCTGGTGAGAACGAG
AAAATGAAGATGAAGAATGGCAGTGTGGCAATGACACTGACAGTGGCACT
AGTACTGGCACTGGCAGTGAGTTTGGCAAATGGAGATGAATCAGAGAAGG
TGATAGTGAAGAAGTTGAAGGGGAAAAAAGTTTGCATAAAAGGGTGGGAG
TGCCCAACATGGTCGAAATTCTGCTGTAACGAGACGATATCAGACTATTT
CCAGGTTTACCAGTTTGAGAATTTCTTCTCGAAAAGGAACACGCCGGTGG
CACATGCCGTGGGATTCTGGGATTATCAGTCTTTCATTACTGCCACCGTC
AAATATCAGCCCCTCGGCTTCGGTACCACCGGTACTAAGCTTGATAAGAT
GAAGGAGATTTGCGCTTTTCTTGCCCACGTGGGCTGCAAGACCTCTTGTG
GATATGGAGTGGCCACTGGAGGACCATTGGCCTGGGGACTTTGCTACAAC
CATGAAATGAGCCCCAGTCAGTCATATTGTGATGATTCCTACAAATACAC
ATATCCCTGCACCCCTGGAGCTGAGTACTATGGCCGAGGTGCTATACCTA
TATACTGGAACTATAACTATGGAGCCACTGGGGAAGCATTGAAGGCAGAT
CTGTTGAATCATCCCGAATACATTGAGCAGAATGCTACCCTTGCCTTTGA
GGCTGCAATTTGGAAGTGGATGACCCCAGTCAAGAAATCCCAGCCTTCAG
CCCATGATGCCTTTGTTGGCAACTGGAAGCCCACCAAGAATGATACTTTG
TCCNAACGGGGACCTAACTTTGGTACCCACATGANNNNNCTCTATGGTGA
GAGCGTATGCGN
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