CK934746

Overview
NameCK934746
Unique NameCK934746
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.686e-34
Identity = 75/200 (37.50%), Postives = 103/200 (51.50%), Query Frame = 2
Query:  311 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            QFE     R+     A GF+ Y++F+ A   +    F  TG    + +E+ AFLA     TS       GGP +WG CY      +  +C  + ++  PC PG  Y+ RG + I +NYNYGA GEA+ ADLL +PE +  + T+AF+ A+W WMT    SQPS H    G W PT  D+ + R P +G     L G   C
Sbjct:  105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQC 293          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.686e-34
Identity = 75/200 (37.50%), Postives = 103/200 (51.50%), Query Frame = 2
Query:  311 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            QFE     R+     A GF+ Y++F+ A   +    F  TG    + +E+ AFLA     TS       GGP +WG CY      +  +C  + ++  PC PG  Y+ RG + I +NYNYGA GEA+ ADLL +PE +  + T+AF+ A+W WMT    SQPS H    G W PT  D+ + R P +G     L G   C
Sbjct:  105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQC 293          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.686e-34
Identity = 74/200 (37.00%), Postives = 109/200 (54.50%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQ-SYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+     RN     A GF+ Y +F+ A   Y    F TTG      +E+ AFLA    +T+ G+  A  GP +WG C+  E + +  +YC+   K  +PC  G +YYGRG I I +NYNYG  G+A+ +DLLN+P+ +  +AT++F+ A W WMTP +  +PS H    G W P+ +D  + R P +G     + G   C
Sbjct:   85 FDQMLLHRNDQACAAKGFYTYDAFVAAANAYPD--FATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEP--KPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTP-QSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVEC 279          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.427e-33
Identity = 71/201 (35.32%), Postives = 107/201 (53.23%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPS--QSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+     RN     A  F+ Y +F+ A   +    F TTG    + +E+ AFLA    +T+ G+  A  GP +WG C+  E + +    YC  S ++  PC  G +YYGRG I I +NYNYG  G+A+ ++LL++P+ +  +AT++F+ A W WMTP +  +PS H    G W P  ND  + R P +G     + G   C
Sbjct:   88 FDQMLLHRNDAACPAKNFYTYDAFVAAANAFP--SFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQW--PCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTP-QSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVEC 283          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 2.061e-32
Identity = 72/202 (35.64%), Postives = 104/202 (51.49%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMK-EICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEM--SPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+     RN     A  F+ Y +F+ A   +   GF   G   D  K E+ AFLA    +T+ G+  A  GP AWG C+  E   +    YC  S ++  PC  G +YYGRG I + +N+NYG  G+A+ ADLL  P+ +  +AT++F+ A W WMTP +  +PS H    G W P+ +D  + R P +G     + G   C
Sbjct:   90 FDQMLLHRNDAACPASNFYTYDAFVAAASAFP--GFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQW--PCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTP-QSPKPSCHAVATGQWTPSADDQAAGRVPGYGVITNIINGGLEC 286          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.095e-25
Identity = 68/199 (34.17%), Postives = 98/199 (49.25%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F+     RN     AV F+ Y +FI A   +   GFGTTG    + KEI AF      +T+ G  ++  GP A G C+  E +                  G  YYGRG I +    NY   G+A++ DL+N+P+ +  +AT++F+ AIW WMTP + ++PS HD   G W P+  DT + R P +G     + G   C
Sbjct:   35 FDQMLKNRNDARCFAVRFYTYDAFIAAANSFP--GFGTTGDDTARKKEIAAFFGQTSHETTGGT-LSPDGPYAGGYCFLREGNQM----------------GNGYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTP-QGNKPSCHDVITGRWTPSAADTSANRVPGYGVITNIINGGIEC 213          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.430e-25
Identity = 66/199 (33.17%), Postives = 93/199 (46.73%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            FE+  S R         F+ Y +FI A   +    FGTTG    + +E+ AF      +T+ G+  A  GP AWG C  +E++PS                   YYGRG I +   YNY   G+AL  DL+N+P+ +  +  +AF  AIW WMT  +  +PS HD     W P+ +D  S R P +G     + G   C
Sbjct:   36 FESMLSHRGDQGCQGA-FYTYDAFIKAAGDFPR--FGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGPFAWGYCRVNEITPSDP----------------PYYGRGPIQLTHKYNYQLAGDALGLDLVNNPDLVSSDPVVAFRTAIWFWMT-AQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEEC 214          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.065e-24
Identity = 65/199 (32.66%), Postives = 95/199 (47.74%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F      RN     A GF+ Y +FI A   +   GFGTTG    + KEI AF      +T+ G  ++  GP A G C+  E +                  G+ +YGRG I +    NY   G+A+  DL+N+P+ +  +AT++F+ AIW WMT  + ++PS HD   G W P+  D  + R P +G     + G   C
Sbjct:   28 FNEMLKNRNDDRCPAKGFYTYDAFIAAANSFP--GFGTTGDDTARKKEIAAFFGQTSHETTGG-SLSADGPFAGGYCFVREGNQM----------------GSGFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMT-AQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIEC 206          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.849e-24
Identity = 60/183 (32.79%), Postives = 90/183 (49.18%), Query Frame = 2
Query:  362 GFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            GF+ Y +FI A   +    F TTG+   + +E+ AFLA    +T+ G+  A  GP                         Y     ++Y+GRG I I +NYNYGA G+A+  DLL +P+ +  + T+ F+ A+W WMTP +  +PS+HD   G W P+  D  + R P +G     + G   C
Sbjct:   18 GFYTYDAFIAAAKSFP--AFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGP-------------------------YELGSTSDYFGRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTP-QSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVEC 172          
BLAST of CK934746 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.644e-23
Identity = 63/199 (31.66%), Postives = 93/199 (46.73%), Query Frame = 2
Query:  314 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAAIWKWMTPVKKSQPSAHDAFVGNWKPTKNDTLSXRGPNFGTHMXXLYGESVC 910
            F      RN     A GF+ Y +FI A   +   GFGT+G    + KEI AF      +T+ G    +  P   G C+  +   S                   YYGRG I +    NY   G A++ DL+N+P+ +  +AT++F+ AIW WMTP + ++PS+HD  +G+W P+  D  + R P  G     + G   C
Sbjct:   36 FNEMLKNRNDGRCPANGFYTYDAFIAAANSFP--GFGTSGDDTARRKEIAAFFGQTSHETTGGS--LSAEPFTGGYCFVRQNDQSD-----------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTP-QDNKPSSHDVIIGSWTPSAADQSANRAPGCGVITNIINGGIEC 212          
The following BLAST results are available for this feature:
BLAST of CK934746 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CHI7_ORYSJ1.686e-3437.50Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI1.686e-3437.50Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
CHI3_ORYSJ1.686e-3437.00Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI1_ORYSJ1.427e-3335.32Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI12_ORYSJ2.061e-3235.64Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIT_PETHY1.095e-2534.17Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHI11_ORYSJ1.430e-2533.17Chitinase 11 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIB_SOLLC2.065e-2432.66Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIT_AVESA7.849e-2432.79Endochitinase (Fragments) OS=Avena sativa PE=1 SV=... [more]
CHIP_TOBAC6.644e-2331.66Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_C04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934746 ID=CK934746; Name=CK934746; organism=Citrus sinensis; type=EST; length=912bp
GGGGGACGCTGCATCCGCCTTGTCAAATCCCTTGCTTCCCATTTCTCTCA
TCTTCCCCCAAGTGAATCTCGAAACAACAGGTAGATCTGGTGAGAACGAG
AAAATGAAGATGAAGAATGGCAGTGTGGCAATGACACTGACAGTGGCACT
AGTACTGGCACTGGCAGTGAGTTTGGCAAATGGAGATGAATCAGAGAAGG
TGATAGTGAAGAAGTTGAAGGGGAAAAAAGTTTGCATAAAAGGGTGGGAG
TGCCCAACATGGTCGAAATTCTGCTGTAACGAGACGATATCAGACTATTT
CCAGGTTTACCAGTTTGAGAATTTCTTCTCGAAAAGGAACACGCCGGTGG
CACATGCCGTGGGATTCTGGGATTATCAGTCTTTCATTACTGCCACCGTC
AAATATCAGCCCCTCGGCTTCGGTACCACCGGTACTAAGCTTGATAAGAT
GAAGGAGATTTGCGCTTTTCTTGCCCACGTGGGCTGCAAGACCTCTTGTG
GATATGGAGTGGCCACTGGAGGACCATTGGCCTGGGGACTTTGCTACAAC
CATGAAATGAGCCCCAGTCAGTCATATTGTGATGATTCCTACAAATACAC
ATATCCCTGCACCCCTGGAGCTGAGTACTATGGCCGAGGTGCTATACCTA
TATACTGGAACTATAACTATGGAGCCACTGGGGAAGCATTGAAGGCAGAT
CTGTTGAATCATCCCGAATACATTGAGCAGAATGCTACCCTTGCCTTTGA
GGCTGCAATTTGGAAGTGGATGACCCCAGTCAAGAAATCCCAGCCTTCAG
CCCATGATGCCTTTGTTGGCAACTGGAAGCCCACCAAGAATGATACTTTG
TCCNAACGGGGACCTAACTTTGGTACCCACATGANNNNNCTCTATGGTGA
GAGCGTATGCGN
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