CK934768

Overview
NameCK934768
Unique NameCK934768
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: COABC_ECOL6 (Coenzyme A biosynthesis bifunctional protein coaBC OS=Escherichia coli O6 GN=coaBC PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.514e-13
Identity = 54/171 (31.58%), Postives = 91/171 (53.22%), Query Frame = 1
Query:  328 RILLAASGSVAAIKFGNLCHCFSE-WAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVL-HIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEPSLI 834
            +I+L  SG +AA K   L     +  A+VR   T+++  FI   +L + V  Y   D  +  +   ++ + HIEL +WAD++++AP +A  + ++A G+ ++L++ I  A     P+ V PAMN  M+    T+ +L  +   G+ +  P S   ACGD G G M +P  I
Sbjct:    7 KIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAKAFITPLSL-QAVSGYPVSD--SLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGMANDLVSTICLATP--APVAVLPAMNQQMYRAAATQHNLEVLASRGLLIWGPDSGSQACGDIGPGRMLDPLTI 172          
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: COABC_MYCTU (Coenzyme A biosynthesis bifunctional protein coaBC OS=Mycobacterium tuberculosis GN=coaBC PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12
Identity = 52/178 (29.21%), Postives = 88/178 (49.44%), Query Frame = 1
Query:  328 RILLAASGSVAAIKFGNLCHCFSEWAE-VRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGD--SVLHIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEPSLIYSTVRL 852
            ++++  SG +AA K   +    +E +  VR + T+S+L F+  A       F     E    +   D  +V H+ L + AD++V+AP +A  L + A G  D+LLT  +       P+  APAM+T MW +P T  ++ ++   G  ++ P + RL   D G G + E   I +  +L
Sbjct:   10 QVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAAT------FEALSGEPVCTDVFADVPAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATLLT--ARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGADSGAGRLPEAEEITTLAQL 179          
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: COABC_MYCBO (Coenzyme A biosynthesis bifunctional protein coaBC OS=Mycobacterium bovis GN=coaBC PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.741e-12
Identity = 52/178 (29.21%), Postives = 88/178 (49.44%), Query Frame = 1
Query:  328 RILLAASGSVAAIKFGNLCHCFSEWAE-VRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGD--SVLHIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPVSKRLACGDYGNGAMAEPSLIYSTVRL 852
            ++++  SG +AA K   +    +E +  VR + T+S+L F+  A       F     E    +   D  +V H+ L + AD++V+AP +A  L + A G  D+LLT  +       P+  APAM+T MW +P T  ++ ++   G  ++ P + RL   D G G + E   I +  +L
Sbjct:   10 QVIVGVSGGIAAYKACTVVRQLTEASHRVRVIPTESALRFVGAAT------FEALSGEPVCTDVFADVPAVPHVHLGQQADLVVVAPATADLLARAAAGRADDLLTATLLT--ARCPVLFAPAMHTEMWLHPATVDNVATLRRRGAVVLEPATGRLTGADSGAGRLPEAEEITTLAQL 179          
BLAST of CK934768 vs. ExPASy Swiss-Prot
Match: MRSD_BACSY (Mersacidin decarboxylase OS=Bacillus sp. (strain HIL-Y85/54728) GN=mrsD PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.086e-12
Identity = 46/154 (29.87%), Postives = 78/154 (50.65%), Query Frame = 1
Query:  316 LRKPRILLAASGSVAAIKFGN-LCHCFSEWAEVRAVATKSSLHFIDRAALPKDVIFYTDEDEWATWNKIGDSVLHIELRRWADIMVIAPLSASTLGKIAGGLCDNLLTCIVRAWDYNKPLFVAPAMNTFMWNNPFTERHLMSIDELGISLIPPV 774
            L+  ++L+   GS++++   + L +  S + E+R V TK++   I     P   + Y  +  ++   + G    H+E+ RWADI  I P +A+ LG+ A G+  NL+   V A  +N   F  P MN  MWN     R++  + + G  +I PV
Sbjct:    6 LKDKKLLIGICGSISSVGISSYLLYFKSFFKEIRVVMTKTAEDLI-----PAHTVSYFCDHVYSEHGENGKRHSHVEIGRWADIYCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFF--PNMNDLMWNKTVVSRNIEQLRKDGHIVIEPV 152          
The following BLAST results are available for this feature:
BLAST of CK934768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
COABC_ECOL62.514e-1331.58Coenzyme A biosynthesis bifunctional protein coaBC... [more]
COABC_MYCTU4.741e-1229.21Coenzyme A biosynthesis bifunctional protein coaBC... [more]
COABC_MYCBO4.741e-1229.21Coenzyme A biosynthesis bifunctional protein coaBC... [more]
MRSD_BACSY8.086e-1229.87Mersacidin decarboxylase OS=Bacillus sp. (strain H... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004227_B03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934768 ID=CK934768; Name=CK934768; organism=Citrus sinensis; type=EST; length=854bp
GGGGGGTTACTTCAAAATTTGATGGCGTTGCTTTGTTTGTCAACGTCGCG
GCTGCCGCTCTCTATTTAAAACCCCCCTCGCACTCTCTCTACTCTCTAGG
TCTAGGCTGCCTCCAAGCCAGCGACCGTTAGTCGTCGGTTTCCACACTCC
GACGCTGCGACGTCGATTGTTGTCTCCCCTCCGCCACGCCACTCGTGGAT
TGCTGTTCTACCACCGCCGGCCGCGGCTGATCTGATTCATCTCATCTCAT
GATTGATTATGGCATACTCTGAACCTACAAGTACCGATAGGGAGGCGATG
CAGGTCAATACTGGTCTGAGGAAACCCCGTATTTTACTTGCTGCAAGTGG
AAGTGTAGCTGCAATAAAATTTGGGAATCTCTGTCATTGTTTTTCTGAGT
GGGCGGAAGTAAGAGCGGTGGCCACAAAGTCCTCTCTACACTTCATTGAT
AGAGCAGCGCTTCCTAAGGATGTGATCTTTTACACAGACGAGGATGAATG
GGCCACCTGGAACAAAATAGGTGATAGCGTTCTTCACATCGAGCTCCGCA
GATGGGCTGATATTATGGTTATTGCTCCGCTGTCAGCAAGCACACTTGGC
AAGATTGCAGGTGGATTGTGTGACAATCTGCTGACATGCATTGTGCGGGC
ATGGGACTACAATAAGCCACTGTTTGTTGCACCTGCTATGAACACTTTCA
TGTGGAATAATCCATTCACAGAGCGGCATCTTATGTCAATTGATGAGCTT
GGAATTTCTCTCATTCCACCTGTCTCCAAAAGGCTGGCTTGCGGAGATTA
TGGTAATGGTGCCATGGCTGAACCTTCATTGATCTACTCGACTGTGAGAC
TGTT
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