CK934772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS13_CANMA (40S ribosomal protein S13 OS=Candida maltosa GN=RPS13 PE=3 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 5.966e-62 Identity = 113/151 (74.83%), Postives = 132/151 (87.42%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLVA 538 MGRMHS GKGIS+SA+PY R PSW K+SS +V + + K+A+KGLTPSQIGVILRD+HG++Q K VTG+K+LRILK++GLAPE+PEDLY LIKKAVA+RKHLERNRKDKDSKFRLIL+ESRIHRLARYY+ LPP WKYES TAS LVA Sbjct: 1 MGRMHSAGKGISSSAIPYSRNAPSWFKLSSDEVVEQVIKYARKGLTPSQIGVILRDAHGVSQAKIVTGNKVLRILKSNGLAPELPEDLYFLIKKAVAVRKHLERNRKDKDSKFRLILIESRIHRLARYYRTVSVLPPNWKYESATASALVA 151
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS13_DROME (40S ribosomal protein S13 OS=Drosophila melanogaster GN=RpS13 PE=2 SV=3) HSP 1 Score: 236.884 bits (603), Expect = 1.018e-61 Identity = 115/151 (76.16%), Postives = 132/151 (87.42%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLVA 538 MGRMH+ GKGIS SALPY+RT PSWLK+++ DV++ I K KKGLTPS+IG+ILRDSHG+AQV+ V G+KILRI+K+ GL P+IPEDLYH+IKKAVAIRKHLERNRKDKD KFRLILVESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 1 MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 151
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS13_CIOIN (40S ribosomal protein S13 OS=Ciona intestinalis GN=RPS13 PE=2 SV=3) HSP 1 Score: 236.498 bits (602), Expect = 1.329e-61 Identity = 115/151 (76.16%), Postives = 133/151 (88.08%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLVA 538 MGRMH+ GKG+S+SALPY+R+ P+WLK+SS+DV++ I K AKKGL PSQIGVILRDSHG AQV+ VTG++ILR+LKA GLAP++PED+YHLIKKAVA+RKHLERNRKD DSKFRLILVESRIHRL RYYK LPP WKYES TAS LVA Sbjct: 1 MGRMHAPGKGLSSSALPYRRSVPTWLKLSSEDVKEQIYKLAKKGLRPSQIGVILRDSHGXAQVRFVTGNQILRVLKAKGLAPDLPEDIYHLIKKAVAMRKHLERNRKDTDSKFRLILVESRIHRLGRYYKTKGVLPPNWKYESATASALVA 151
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS13_SCHPO (40S ribosomal protein S13 OS=Schizosaccharomyces pombe GN=rps13 PE=1 SV=2) HSP 1 Score: 236.113 bits (601), Expect = 1.736e-61 Identity = 112/151 (74.17%), Postives = 132/151 (87.42%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLVA 538 MGRMHS+GKGI++SALPY R+PP+W K + V + I KF+KKG++PSQIGV LRDSHGI QV+ +TG KI+RILKA+GLAPE+PEDLY+LIKKAV++RKHLERNRKDKDSKFRLIL+ESRIHRLARYY+K LPP WKYES TAS LVA Sbjct: 1 MGRMHSKGKGIASSALPYVRSPPAWCKADADSVVEQILKFSKKGMSPSQIGVTLRDSHGIPQVRFITGQKIMRILKANGLAPELPEDLYNLIKKAVSVRKHLERNRKDKDSKFRLILIESRIHRLARYYRKVGALPPTWKYESATASALVA 151
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS13_PLUXY (40S ribosomal protein S13 OS=Plutella xylostella GN=RpS13 PE=2 SV=3) HSP 1 Score: 235.728 bits (600), Expect = 2.267e-61 Identity = 115/151 (76.16%), Postives = 133/151 (88.08%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLVA 538 MGRMH+ GKGIS SALPY+R+ P+WLK+++ DV++ I K KKGLTPSQIGV+LRDSHG+AQV+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+ KHLERNRKDKDSKFRLILVESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 1 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMGKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 151
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS13_CHOPR (40S ribosomal protein S13 OS=Choristoneura parallela GN=RpS13 PE=2 SV=3) HSP 1 Score: 235.343 bits (599), Expect = 2.961e-61 Identity = 115/151 (76.16%), Postives = 132/151 (87.42%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLVA 538 MGRMH+ GKGIS SALPY+R+ P+WLK+++ DV++ I K KKGLTPSQIGV LRDSHG+ QV+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 1 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVKLRDSHGVVQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKYESSTASALVA 151
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS13_AGABI (40S ribosomal protein S13 OS=Agaricus bisporus GN=RPS13 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.867e-61 Identity = 112/151 (74.17%), Postives = 134/151 (88.74%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLVA 538 MGRMH+ GKGIS+SALPY+RTPPSWLK +S++V + I K A+KGLTPSQIGV LR+SHGI QV+ VTG+KILRILK+ GL P IPEDL+HLIKKAVA+RKH+E NRKDKDSKFRLIL+ESRIHRLARYYK +++PP +KY+S TASTL+A Sbjct: 1 MGRMHAPGKGISSSALPYRRTPPSWLKTTSEEVVEQIVKLARKGLTPSQIGVTLRNSHGIPQVRFVTGNKILRILKSQGLGPSIPEDLWHLIKKAVAVRKHMETNRKDKDSKFRLILIESRIHRLARYYKTKQQIPPTFKYDSATASTLIA 151
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS13_ANOGA (40S ribosomal protein S13 OS=Anopheles gambiae GN=RpS13 PE=2 SV=2) HSP 1 Score: 231.876 bits (590), Expect = 3.274e-60 Identity = 113/151 (74.83%), Postives = 132/151 (87.42%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLVA 538 MGRMH+ GKGIS SALPY+R+ PSWLK+S++DV++ I K KKG+TPSQIG+ILRDSHG+AQV+ V G+K+LRI+KA GL P+IPEDLY LIKKAV+IRKHLERNRKD DSKFRLIL+ESRIHRLARYYK LPP WKYES+TAS LVA Sbjct: 1 MGRMHAPGKGISKSALPYRRSVPSWLKLSAEDVKEQIKKLGKKGMTPSQIGIILRDSHGVAQVRFVNGNKVLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLERNRKDIDSKFRLILIESRIHRLARYYKIKAVLPPNWKYESSTASALVA 151
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS13_YEAST (40S ribosomal protein S13 OS=Saccharomyces cerevisiae GN=RPS13 PE=1 SV=3) HSP 1 Score: 231.106 bits (588), Expect = 5.584e-60 Identity = 108/150 (72.00%), Postives = 131/150 (87.33%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLV 535 MGRMHS GKGIS+SA+PY R P+W K+SS+ V + I K+A+KGLTPSQIGV+LRD+HG+ Q + +TG+KI+RILK++GLAPEIPEDLY+LIKKAV++RKHLERNRKDKD+KFRLIL+ESRIHRLARYY+ LPP WKYES TAS LV Sbjct: 1 MGRMHSAGKGISSSAIPYSRNAPAWFKLSSESVIEQIVKYARKGLTPSQIGVLLRDAHGVTQARVITGNKIMRILKSNGLAPEIPEDLYYLIKKAVSVRKHLERNRKDKDAKFRLILIESRIHRLARYYRTVAVLPPNWKYESATASALV 150
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS13_CAEEL (40S ribosomal protein S13 OS=Caenorhabditis elegans GN=rps-13 PE=2 SV=2) HSP 1 Score: 227.639 bits (579), Expect = 6.174e-59 Identity = 106/151 (70.20%), Postives = 133/151 (88.08%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLVA 538 MGRMH+ GKG++ SA+PY+R+ PSW K+++++V+D I K AKKGL PSQIGVILRDSHG+ QV+ + G+KI RILK+ G+APE+PEDLYHL+KKAVAIRKHLER+RKD DSK+RLILVESRIHRLARYYK ++LPP WKYES TA++LV+ Sbjct: 1 MGRMHNPGKGMAKSAIPYRRSVPSWQKMTAEEVQDQIVKMAKKGLRPSQIGVILRDSHGVGQVRRLAGNKIFRILKSKGMAPELPEDLYHLVKKAVAIRKHLERSRKDIDSKYRLILVESRIHRLARYYKTKRQLPPTWKYESGTAASLVS 151 The following BLAST results are available for this feature:
BLAST of CK934772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934772 ID=CK934772; Name=CK934772; organism=Citrus sinensis; type=EST; length=807bpback to top |