CK934772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS15_METTH (30S ribosomal protein S15P/S13e OS=Methanobacterium thermoautotrophicum GN=rps15p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.530e-28 Identity = 62/128 (48.44%), Postives = 89/128 (69.53%), Query Frame = 2 Query: 152 PSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLV 535 P W++ S++++ED I K ++G + S+IG+ILRD HGI VK+VTG KI +IL+ H + PE PEDL +LI+KAV IR HL+ + KD ++ L +VES+I RL RYY + LP W+Y+ A+ LV Sbjct: 6 PDWVEYSNEEIEDLIVKLYREGNSTSKIGIILRDQHGIPSVKAVTGLKITQILEKHEMKPEYPEDLMNLIRKAVNIRDHLKEHPKDLHTRRGLQIVESKIRRLVRYYVREGVLPEGWRYDPQKAALLV 133
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS15_METST (30S ribosomal protein S15P/S13e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps15p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.256e-27 Identity = 63/128 (49.22%), Postives = 85/128 (66.41%), Query Frame = 2 Query: 152 PSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLV 535 P W++ S +++E+ I K K+G + SQIG+ LRD HGI K+V G KI ILK +G E PEDL +LIK+AV IR+HLE N KD +K LI +ES+I RL +YY + LP W+Y+ TA+ LV Sbjct: 5 PEWVEQSPEEIEELIVKLHKEGQSTSQIGITLRDQHGIPNTKAVLGEKITDILKRNGTDFEYPEDLLNLIKRAVNIREHLEENPKDIHTKRGLIKIESKIRRLVKYYTRNNVLPEGWRYDPKTAALLV 132
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS15_METS3 (30S ribosomal protein S15P/S13e OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps15p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.797e-27 Identity = 63/128 (49.22%), Postives = 83/128 (64.84%), Query Frame = 2 Query: 152 PSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLV 535 P W+ S +++E+ I KF K+G + S+IG+ILRD +GI VK VTG +I +ILK + A + PEDL +LIK+AV IR HL N KD SK L ++ESRI RLA YY LP W+Y A+ LV Sbjct: 4 PEWVTYSDEEIEEMILKFNKEGKSTSEIGIILRDQYGIPSVKEVTGERITQILKRNDQAGKYPEDLMNLIKRAVNIRDHLAENPKDLHSKRGLTIIESRIRRLASYYVNEGALPEGWRYNPKEAALLV 131
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS15_NANEQ (30S ribosomal protein S15P/S13e OS=Nanoarchaeum equitans GN=rps15p PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.890e-26 Identity = 58/137 (42.34%), Postives = 82/137 (59.85%), Query Frame = 2 Query: 98 HSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKY 508 H R G S S P + T P W + VE+ I + AK+G +P+ IG+ILRD +GI V+ G + L+ GL P+IP DL +L+K+A + KH+E N +D +K L+ S+IHRLA+YYK+ LP WKY Sbjct: 7 HKRYHGQSGSKRPLRTTKPEWAPYDKEFVENKIIELAKQGYSPAMIGLILRDQYGIPDVRLYIGKSLQDFLEEKGLLPDIPWDLIYLLKRAYRVYKHIELNPRDTQAKRNYQLIISKIHRLAKYYKRKGVLPKDWKY 143
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS15_METB6 (30S ribosomal protein S15P/S13e OS=Methanoregula boonei (strain 6A8) GN=rps15p PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.005e-25 Identity = 62/151 (41.06%), Postives = 90/151 (59.60%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLVA 538 M RMH+R +G S+S P + P+W +E I K+G + S IG++LRD +G+ VK VTG I IL + ++ EIPEDL L+ KA+ +RKHL N KD +K +L LVE++I RL +YY +KLP + Y+ A L++ Sbjct: 1 MARMHARRRGKSSSVRPARNEAPAWSNTDKAAIEKLIVDLRKEGTSASMIGLVLRDRYGVPDVKMVTGKSIGDILTENKVSSEIPEDLRDLMVKALGLRKHLGENPKDLHNKRQLHLVEAKIRRLVKYYIGTRKLPAGFTYKPENAEILLS 151
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS15_METTP (30S ribosomal protein S15P/S13e OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps15p PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.697e-24 Identity = 61/167 (36.53%), Postives = 90/167 (53.89%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLER----------------NRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLVA 538 M RMHSR KG S S P P W +S +++E I ++G++ + IG+ LRD +G+ +K + G + L+ PEIPEDL +L++KA+ +R+HL R KD +K L LVES+I RL RYYK+ +LP W+Y TA ++ Sbjct: 1 MARMHSRKKGSSGSRPPVVDKLPEWCDVSKEELEKTIMTLHERGMSNAMIGLTLRDQYGVPNLKLILGKSLSSFLRDRNALPEIPEDLSNLMRKALRLRRHLLRAQPRGTVSDTSISRLPRTKDIHNKRALQLVESKIRRLVRYYKQVGRLPATWEYRPETAEIQIS 167
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS15_HALSA (30S ribosomal protein S15P/S13e OS=Halobacterium salinarium GN=rps15p PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.130e-23 Identity = 59/154 (38.31%), Postives = 87/154 (56.49%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSH----GIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYESTTASTLV 535 M RMH+R +G S S P PP W + +E+ + + A++G PSQIG+ LRD + VK TG K+ IL+AH PE+PED +L++KAV + +H+E N +D +K L +S+I RLA YY + KL + Y TA ++ Sbjct: 1 MARMHTRRRGSSGSDRPTADEPPEWSDVDEDAIEERVVELAEQGHDPSQIGLKLRDEGVQGTPVPDVKLATGKKVTEILEAHDAEPELPEDFRNLLEKAVRLHEHVEANGQDHQNKRALQNTQSKIRRLADYY-RGDKLDEEFAYSYETAREII 153
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS15_PICTO (30S ribosomal protein S15P/S13e OS=Picrophilus torridus GN=rps15p PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.588e-22 Identity = 54/142 (38.03%), Postives = 84/142 (59.15%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVWKYE 511 M RMH+R +G S S R PSW++ S ++++ I K K+G+T S IG+ LRD + I + V K+ ++LK + L ++PEDL LI++ KHL N+ D ++K + L+ S++ RL RYYK+ +LP W E Sbjct: 1 MARMHTRKRGRSGSKRIEVRERPSWIQYSDDEIKEMIVKMRKQGMTKSMIGIRLRDQYAIPGTRPVLHMKLGQVLKENNLESDVPEDLQALIERYKRAMKHLSLNKHDMNNKRKAQLIMSKMLRLIRYYKRTSRLPQDWSLE 142
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS15_HALWD (30S ribosomal protein S15P/S13e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps15p PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22 Identity = 54/134 (40.30%), Postives = 80/134 (59.70%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSH----GIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYK 475 M RMH+R +G S S P PP W I + +E+ + + A++G PSQIG+ LRD I VK T K+ IL+ H PE+PEDL +L+++A+ +R+H++ N +D +K L ES+I RLA YY+ Sbjct: 1 MARMHTRRRGSSGSDKPVADDPPEWSDIDADAIEERVVELAEQGHEPSQIGMKLRDEGVKGTPIPDVKLATDKKVTTILEEHNAKPELPEDLRNLMERAIRLRRHVDENGQDMQNKRALQNTESKIRRLASYYR 134
BLAST of CK934772 vs. ExPASy Swiss-Prot
Match: RS15_THEAC (30S ribosomal protein S15P/S13e OS=Thermoplasma acidophilum GN=rps15p PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.030e-21 Identity = 56/139 (40.29%), Postives = 83/139 (59.71%), Query Frame = 2 Query: 86 MGRMHSRGKGISASALPYKRTPPSWLKISSQDVEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKPKKLPPVW 502 M RMH+R +G S S Y PSW++ S +V + I K G+ PS IG+ LRD +GI VK+V G K+ ++L GL ++PEDL +LIK+ + KH+E N KD+ +K L+ +++ RL +YYK+ L W Sbjct: 1 MARMHTRKRGRSGSKKVYG-VQPSWIQYSKDEVINTIVNLKKSGVPPSVIGIKLRDQYGIPTVKAVLGMKLGKVLSEKGLKDDVPEDLGNLIKRYNNVAKHVELNPKDQANKRGRDLIMAKMLRLVKYYKRTGVLDEKW 138 The following BLAST results are available for this feature:
BLAST of CK934772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934772 ID=CK934772; Name=CK934772; organism=Citrus sinensis; type=EST; length=807bpback to top |