CK934804

Overview
NameCK934804
Unique NameCK934804
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CYAC3_HUMAN (Cytochrome b ascorbate-dependent protein 3 OS=Homo sapiens GN=CYBASC3 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.820e-30
Identity = 80/190 (42.11%), Postives = 107/190 (56.32%), Query Frame = 1
Query:    4 RGGLSLASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYRTVS---GTKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYS--TEALLVNSLGILIVVLGGFVILALI 558
            RGG   A +    +FN HPVLMV G+V+  G A L YR      G K   KL+H +L  +AF+L+++G+ A   FHN     N YSLHSWLG+  VFLF  QW  GF  F  P  S   R+ L P HVF G  I +L++A+  +GI EK+ F   N     +S  +EA+  NS G+L+V  G  V+  L+
Sbjct:   32 RGGF--AWNGSIYMFNWHPVLMVAGMVVFYGGASLVYRLPQSWVGPKLPWKLLHAALHLMAFVLTVVGLVAVFTFHNHGRTANLYSLHSWLGITTVFLFACQWFLGFAVFLLPWASMWLRSLLKPIHVFFGAAILSLSIASVISGINEKLFFSLKNTTRPYHSLPSEAVFANSTGMLVVAFGLLVLYILL 219          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CY561_SHEEP (Cytochrome b561 OS=Ovis aries GN=CYB561 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.820e-30
Identity = 75/185 (40.54%), Postives = 105/185 (56.76%), Query Frame = 1
Query:    4 RGGLSLASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYRTVSG-TKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEALLVNSLGILIVVLGGFVILAL 555
            RGG++  S    L FNVHP+ MVIGLV L G+A+L YR      K+  K++H  L   AF+++L+G+ A  + H  KG  + YSLHSW G+    LF  QW  GF+ F +PG S + R+   P HVF G  I+ L+VATA  G+ E + F +     S +  E +L N LG+L+      V+  L
Sbjct:   40 RGGIAWESA---LQFNVHPLCMVIGLVFLQGDALLVYRVFRNEAKRTTKVLHGLLHVFAFVIALVGLVAVFEHHRKKGYADLYSLHSWCGILVFALFFAQWLVGFSFFLFPGASFSLRSRYRPQHVFFGAAIFLLSVATALLGLKEALLF-ELGTKYSTFEPEGVLANVLGLLLAAFATVVLYIL 220          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CY561_BOVIN (Cytochrome b561 OS=Bos taurus GN=CYB561 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.820e-30
Identity = 77/192 (40.10%), Postives = 110/192 (57.29%), Query Frame = 1
Query:    4 RGGLSLASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYRTVSG-TKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEALLVNSLGILIVVLGGFVILALITPENGK 576
            RGG++  S    L FNVHP+ M+IGLV L G+A+L YR      K+  K++H  L   AF+++L+G+ A  + H  KG  + YSLHSW G+    LF  QW  GF+ F +PG S + R+   P HVF G  I+ L+VATA  G+ E + F +     S +  E +L N LG+L+      VIL ++T  + K
Sbjct:   40 RGGIAWESA---LQFNVHPLCMIIGLVFLQGDALLVYRVFRNEAKRTTKVLHGLLHVFAFVIALVGLVAVFEHHRKKGYADLYSLHSWCGILVFALFFAQWLVGFSFFLFPGASFSLRSRYRPQHVFFGAAIFLLSVATALLGLKEALLF-ELGTKYSMFEPEGVLANVLGLLLATF-ATVILYILTRADWK 226          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CYBR1_HUMAN (Cytochrome b reductase 1 OS=Homo sapiens GN=CYBRD1 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.105e-30
Identity = 72/186 (38.71%), Postives = 104/186 (55.91%), Query Frame = 1
Query:   19 LASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYR---TVSGTKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEALLVNSLGILIVVLGGFVILALITPE 567
            L  D   L FN HPVLMV G V + G A++ YR   T   +K L K +H  L  +A +L++I V A  + HN   I N YSLHSW+GL  V  + +Q  +GF+ F  P    + RA L+P HV+ G+ I+   +ATA  G+ EK+ F   +   S +  E + VN+LG+LI+V G  +   +  P+
Sbjct:   38 LGWDGSALEFNWHPVLMVTGFVFIQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVAAILAIISVVAVFENHNVNNIANMYSLHSWVGLIAVICYLLQLLSGFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTEKLIFSLRDPAYSTFPPEGVFVNTLGLLILVFGALIFWIVTRPQ 223          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CY561_XENLA (Cytochrome b561 OS=Xenopus laevis GN=cyb561 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.034e-30
Identity = 71/178 (39.89%), Postives = 107/178 (60.11%), Query Frame = 1
Query:   40 LIFNVHPVLMVIGLVLLNGEAMLAYRTVSG-TKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEALLVNSLGILIVVLGGFVILALITPEN 570
            L FNVHP+ MV+G+V L GEA+L YR     TK+  K++H  L  +A ++SL+GV A  ++H   G  + YSLHSW G+    L+ +QW  GF+ F+ PG +   R+   P H F G  ++  ++AT+  G+ EK+    ++H       E +LVNSLG+L+VV G  VI  ++T E+
Sbjct:   48 LQFNVHPLCMVLGMVFLCGEALLVYRVFRHETKRSTKILHGVLHIMALVISLVGVIAVFQYHQANGYPDMYSLHSWCGIVTFTLYILQWIIGFSLFFIPGVAFTYRSQFKPLHEFFGRALFLSSIATSLLGLTEKMFSEYSSH-----PAEGILVNSLGVLLVVFGA-VIAYILTRED 219          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CYBR1_PONAB (Cytochrome b reductase 1 OS=Pongo abelii GN=CYBRD1 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.433e-29
Identity = 73/187 (39.04%), Postives = 104/187 (55.61%), Query Frame = 1
Query:   19 LASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYR---TVSGTKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEAL-LVNSLGILIVVLGGFVILALITPE 567
            L  D   L FN HPVLMV G V + G A++ YR   T   +K L K +H  L  +A +L++I V A  + HN   I N YSLHSW+GL  V  + +Q  AGF+ F  P    + RA L+P HV+ G+ I+   +ATA  G+ EK+ F   +   S +  E +  VN+LG+LI+V G  +   +  P+
Sbjct:   38 LGWDGSALEFNWHPVLMVTGFVFIQGIAIIVYRLSWTWKCSKLLMKSIHAGLNAVAAILAVISVVAVFENHNVNNIANMYSLHSWVGLIAVICYLLQLLAGFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGVTEKLIFSLRDPAYSTFPPEGVFFVNTLGLLILVFGALIFWIVTRPQ 224          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CYAC3_DANRE (Cytochrome b ascorbate-dependent protein 3 OS=Danio rerio GN=cybasc3 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.957e-28
Identity = 78/201 (38.81%), Postives = 109/201 (54.23%), Query Frame = 1
Query:   22 ASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYR---TVSGTKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFL--QTNHVISRYST---EALLVNSLGILIVVLGGFVILALIT------PENGKSE 582
            A D     FN HPVLMV G+++L G A + YR   T    K   KL+H  L  ++F+ S+IG+ A   FHN     N YSLHSW+G+    LF  QW  GFT+F  P      RA + P HV++G  I  L++ +  +GI EK+ F+  +T +    YS    EA+  NSLG++IV   G V+L +++      PE G  E
Sbjct:   37 AWDGSSKNFNWHPVLMVTGMLVLYGNAAVVYRIPLTWGHNKLPWKLLHAGLLLLSFIFSVIGLCAVFNFHNVHHTANLYSLHSWVGICTAALFTAQWVMGFTSFLLPCTPMAVRAFVKPTHVWMGAMILVLSIVSCISGINEKLFFVLKETTNGTKPYSALPPEAVAANSLGVIIVAF-GLVVLKILSNQMWQRPEPGDDE 236          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CYBR1_RAT (Cytochrome b reductase 1 OS=Rattus norvegicus GN=Cybrd1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.158e-27
Identity = 66/186 (35.48%), Postives = 100/186 (53.76%), Query Frame = 1
Query:   19 LASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYR---TVSGTKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEALLVNSLGILIVVLGGFVILALITPE 567
            L  D   L FN HPVL V G V + G A++ YR   T   +K L K +H  L  +A +L++I V A   +HN + I + YSLHSW+GL  + L+  Q   GF  F  P    + RA ++P HV+ G+ ++   +AT   G+ EK+ F+  N     +  E +  N+LG+LI+V G  +   +  P+
Sbjct:   38 LGWDGGALEFNWHPVLAVTGFVFIQGIAIIVYRLPWTWKCSKFLMKSIHAGLNAVAAILAIISVVAVFDYHNVRKIPHMYSLHSWVGLTVLILYIQQLVVGFFIFLLPWAPPSLRAIVMPIHVYSGLLLFGTVIATVLMGVTEKLFFVLKNPSYHSFPPEGVFTNTLGLLILVFGALIFWIVTRPQ 223          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CYBR1_MOUSE (Cytochrome b reductase 1 OS=Mus musculus GN=Cybrd1 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.083e-26
Identity = 63/186 (33.87%), Postives = 101/186 (54.30%), Query Frame = 1
Query:   19 LASDNKDLIFNVHPVLMVIGLVLLNGEAMLAYR---TVSGTKKLRKLVHLSLQFIAFLLSLIGVWAALKFHNDKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQTNHVISRYSTEALLVNSLGILIVVLGGFVILALITPE 567
            L  +   L FN HPVL V G V + G A++ YR   T   +K L K +H  L  +A +L++I V A  ++HN + + + YSLHSW+GL  + L+  Q   GF  F  P    + RA ++P HV+ G+ ++   +AT   G+ EK+ F+  +     +  E +  N+LG+LI+V G  +   +  P+
Sbjct:   38 LGWNGSGLEFNWHPVLAVTGFVFIQGIAIIVYRLPWTWKCSKLLMKSIHAGLNAVAAILAIISVVAVFEYHNVQKVPHMYSLHSWVGLTALILYIQQLVVGFFVFLLPWAPPSLRAIVMPIHVYSGLLLFGTVIATVLMGVTEKLFFVLKHPSYHSFPPEGVFTNTLGLLILVFGALIFWIVTRPQ 223          
BLAST of CK934804 vs. ExPASy Swiss-Prot
Match: CY561_CAEEL (Putative cytochrome b561 OS=Caenorhabditis elegans GN=F55H2.5 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.206e-19
Identity = 53/154 (34.42%), Postives = 79/154 (51.30%), Query Frame = 1
Query:   25 SDNKDLIFNVHPVLMVIGLVLLNGEAMLAYRTVSGT-KKLRKLVHLSLQFIAFLLSLIGVWAALKFHN--------DKGIDNFYSLHSWLGLACVFLFGIQWAAGFTTFWYPGGSKNGRASLLPWHVFLGVYIYALAVATAATGILEKVTFLQT 459
            +++ D  FN HP  M++G+V L GEA+L YR      KK  K +H+ L     +  L+ + A   +HN           I N  SLHSW+GL+ V L+  Q+  GF T+++PG     R  ++P+H   GV I+     T A GI E+  +  T
Sbjct:   53 NEDPDKEFNYHPTFMIMGMVFLFGEALLVYRVFRNERKKFSKTLHVILHSCVLVFMLMALKAVFDYHNLHKDPSGNPAPIVNLVSLHSWIGLSVVILYFAQYIVGFITYFFPGMPIPIRQLVMPFHQMFGVLIFIFVSITVAMGISERAAWKHT 206          
The following BLAST results are available for this feature:
BLAST of CK934804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
CYAC3_HUMAN1.820e-3042.11Cytochrome b ascorbate-dependent protein 3 OS=Homo... [more]
CY561_SHEEP1.820e-3040.54Cytochrome b561 OS=Ovis aries GN=CYB561 PE=2 SV=1[more]
CY561_BOVIN1.820e-3040.10Cytochrome b561 OS=Bos taurus GN=CYB561 PE=1 SV=2[more]
CYBR1_HUMAN3.105e-3038.71Cytochrome b reductase 1 OS=Homo sapiens GN=CYBRD1... [more]
CY561_XENLA9.034e-3039.89Cytochrome b561 OS=Xenopus laevis GN=cyb561 PE=2 S... [more]
CYBR1_PONAB3.433e-2939.04Cytochrome b reductase 1 OS=Pongo abelii GN=CYBRD1... [more]
CYAC3_DANRE4.957e-2838.81Cytochrome b ascorbate-dependent protein 3 OS=Dani... [more]
CYBR1_RAT7.158e-2735.48Cytochrome b reductase 1 OS=Rattus norvegicus GN=C... [more]
CYBR1_MOUSE2.083e-2633.87Cytochrome b reductase 1 OS=Mus musculus GN=Cybrd1... [more]
CY561_CAEEL4.206e-1934.42Putative cytochrome b561 OS=Caenorhabditis elegans... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004226_F04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934804 ID=CK934804; Name=CK934804; organism=Citrus sinensis; type=EST; length=744bp
GGGAGAGGAGGCTTGTCTCTTGCCTCCGATAACAAAGATCTCATATTTAA
TGTTCATCCGGTTCTTATGGTGATCGGTCTCGTACTCTTGAATGGCGAAG
CTATGCTAGCATACAGGACAGTTTCAGGGACAAAAAAGCTCAGAAAATTG
GTTCATCTAAGCTTGCAATTCATTGCTTTTCTTTTAAGCTTGATTGGTGT
TTGGGCTGCTCTGAAATTCCACAATGACAAGGGTATTGATAATTTCTACA
GCCTGCATTCATGGTTGGGACTAGCTTGCGTTTTCCTATTTGGCATCCAG
TGGGCTGCTGGATTTACAACCTTTTGGTATCCAGGGGGCTCGAAAAATGG
TAGAGCTTCCTTGCTGCCATGGCATGTGTTCCTTGGGGTTTACATATATG
CCCTAGCTGTTGCTACTGCTGCCACCGGAATCTTAGAGAAAGTCACTTTC
CTTCAGACCAACCACGTCATAAGTCGTTATTCTACCGAGGCCTTGCTTGT
GAACTCTCTAGGAATTTTGATTGTCGTTCTAGGAGGATTTGTTATTCTTG
CTCTTATTACTCCTGAGAACGGCAAGTCGGAAGTTCTCAGAGCATCGGAA
TAGGCATTTTATGAATTCATCCATGATTCACAGGCGAGTAAGGTGTATTT
ATACTCCAAGAGAAATACAGGATTTGTTCTTTTCAGAAAATGGATGTATC
AATTATGACAATTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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