CK934815

Overview
NameCK934815
Unique NameCK934815
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_DESVH (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groS PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.884e-21
Identity = 49/94 (52.13%), Postives = 68/94 (72.34%), Query Frame = 2
Query:  308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 586
            ++KPL DRVLVK    EEKT GG+++P  A+ KP  GEVVA G GKT    KL  ++VK G  V+++KYAGTE++ +G  HL++REDD++ I+E
Sbjct:    2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95          

HSP 2 Score: 89.7373 bits (221), Expect = 2.526e-17
Identity = 40/94 (42.55%), Postives = 65/94 (69.15%), Query Frame = 2
Query:  602 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            +LKPLNDRV +K  E+EE TAGGL + + +KEKPS G V+A GPG   ++G    +++  G+ V+++KYAG + K  DG  ++ +R  +++A++
Sbjct:    2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAGDMVLFNKYAGTEIK-IDGVEHLVMREDDILAII 94          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_DESVM (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=groS PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.766e-21
Identity = 50/94 (53.19%), Postives = 67/94 (71.28%), Query Frame = 2
Query:  308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKL-DISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 586
            ++KPL DRVLVK    EEKT GG+F+P  A+ KP  GEVVA G GK     KL  ++VK G  V++SKYAGTE++ +G  HL++REDD++ I+E
Sbjct:    2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIKLDGVEHLVMREDDILAIIE 95          

HSP 2 Score: 95.1301 bits (235), Expect = 6.013e-19
Identity = 43/94 (45.74%), Postives = 67/94 (71.28%), Query Frame = 2
Query:  602 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            +LKPLNDRV +K  E+EE TAGGL + + +KEKPS G V+A GPG + E+G    +++  G+TV++SKYAG + K  DG  ++ +R  +++A++
Sbjct:    2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIK-LDGVEHLVMREDDILAII 94          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_PROM5 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9515) GN=groS PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.424e-21
Identity = 47/97 (48.45%), Postives = 71/97 (73.20%), Query Frame = 2
Query:  596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 886
            +  +KPL DR+FIKV+E+EE TAGG+LL +++KEKP +G V  VGPG L+++G+R+   ++ G+ V+YSKYAG D K   G  Y+ L   +++AV+S
Sbjct:    8 VSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVVS 103          

HSP 2 Score: 86.2705 bits (212), Expect = 2.793e-16
Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 2
Query:  305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +++KPLGDR+ +K+   EEKT GGI LP +A+ KPQ GEV  VG GK     ++    V  G +V+YSKYAGT+++  G  ++++ E D++ ++
Sbjct:    9 STVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_SYNPW (10 kDa chaperonin OS=Synechococcus sp. (strain WH7803) GN=groS PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.390e-21
Identity = 48/98 (48.98%), Postives = 71/98 (72.45%), Query Frame = 2
Query:  596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 886
            +  +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG  +E+G+R+   +  G+ V+YSKYAG D K GSD   Y+ L   +++AV++
Sbjct:    8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKANEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103          

HSP 2 Score: 85.5001 bits (210), Expect = 4.764e-16
Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 2
Query:  305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +++KPLGDRV VK+   EEKT GGI LP  A+ KPQ GEVV VG GK     ++    V  G +V+YSKYAGT+++     ++++ E D++ ++
Sbjct:    9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKANEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_DESHY (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain Y51) GN=groS PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.390e-21
Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = 2
Query:  308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +IKPLGDRV++K   +EEKT  GI +P  A+ KPQ GEVVAVG GK     ++ + VK G +VIYSKYAGTE++++G  +LI++E D++ ++
Sbjct:    2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93          

HSP 2 Score: 84.3445 bits (207), Expect = 1.061e-15
Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 2
Query:  602 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            ++KPL DRV IK    EE T  G+++ + +KEKP  G V+AVGPG + E+G R  L +  G+ V+YSKYAG + K  DG  Y+ L+ ++++AV+
Sbjct:    2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKM-EKGERIVLDVKVGDRVIYSKYAGTEVK-YDGQEYLILKETDILAVI 93          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_DESHD (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=groS PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.390e-21
Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = 2
Query:  308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +IKPLGDRV++K   +EEKT  GI +P  A+ KPQ GEVVAVG GK     ++ + VK G +VIYSKYAGTE++++G  +LI++E D++ ++
Sbjct:    2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLILKETDILAVI 93          

HSP 2 Score: 84.3445 bits (207), Expect = 1.061e-15
Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 2
Query:  602 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            ++KPL DRV IK    EE T  G+++ + +KEKP  G V+AVGPG + E+G R  L +  G+ V+YSKYAG + K  DG  Y+ L+ ++++AV+
Sbjct:    2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKM-EKGERIVLDVKVGDRVIYSKYAGTEVK-YDGQEYLILKETDILAVI 93          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_DESDG (10 kDa chaperonin OS=Desulfovibrio desulfuricans (strain G20) GN=groS PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.390e-21
Identity = 47/94 (50.00%), Postives = 70/94 (74.47%), Query Frame = 2
Query:  308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 586
            ++KPL DRVLVK    EEKT GG+++P  A+ KP  GEV+AVG GKT    K + ++VK G  V+++KYAGTE++ +G +HL++REDD++ I++
Sbjct:    2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVIAVGPGKTADDGKVIAMTVKTGDVVLFNKYAGTEVKLDGVDHLVMREDDILAIIQ 95          

HSP 2 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 42/94 (44.68%), Postives = 67/94 (71.28%), Query Frame = 2
Query:  602 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            +LKPLNDRV +K  E+EE TAGGL + + +KEKPS G VIAVGPG   ++G    +++  G+ V+++KYAG + K  DG +++ +R  +++A++
Sbjct:    2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVIAVGPGKTADDGKVIAMTVKTGDVVLFNKYAGTEVK-LDGVDHLVMREDDILAII 94          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_THETN (10 kDa chaperonin OS=Thermoanaerobacter tengcongensis GN=groS PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.096e-20
Identity = 47/92 (51.09%), Postives = 68/92 (73.91%), Query Frame = 2
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 586
            +KPLGDRV+VK+   EE T GG+ LP  A+ KPQ GEVVAVG G+ +   +++  VK G +VI+SKYAGTE++ +G  +L++RE D++ I+E
Sbjct:    3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQYIDGKRVEPEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94          

HSP 2 Score: 83.9593 bits (206), Expect = 1.386e-15
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 2
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            LKPL DRV +KV ++EE T GG++L   +KEKP  G V+AVGPG    +G R    +  G+ V++SKYAG + K  DG  Y+ LR S+++A++
Sbjct:    3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQY-IDGKRVEPEVKVGDRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_SYNP2 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=groS PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.096e-20
Identity = 47/97 (48.45%), Postives = 71/97 (73.20%), Query Frame = 2
Query:  596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 886
            +  LKPL DRVF+KV+E+EE TAGG+LL +++KEKP IG V+AVG G  +++G+R  + +  G+ V+YSKYAG D K S G +Y+ L   +++A ++
Sbjct:    8 VSTLKPLGDRVFVKVSESEEKTAGGILLPDSAKEKPQIGEVVAVGEGKRNDDGSRSAVDVKVGDKVLYSKYAGTDIKLS-GDDYVLLSEKDILATVA 103          

HSP 2 Score: 95.5153 bits (236), Expect = 4.604e-19
Identity = 46/91 (50.55%), Postives = 68/91 (74.73%), Query Frame = 2
Query:  305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVV 574
            +++KPLGDRV VK+   EEKT GGI LP +A+ KPQ GEVVAVGEGK     ++  + VK G +V+YSKYAGT+++ +G +++++ E D++
Sbjct:    9 STLKPLGDRVFVKVSESEEKTAGGILLPDSAKEKPQIGEVVAVGEGKRNDDGSRSAVDVKVGDKVLYSKYAGTDIKLSGDDYVLLSEKDIL 99          
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_MICAN (10 kDa chaperonin OS=Microcystis aeruginosa (strain NIES-843) GN=groS PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.096e-20
Identity = 46/97 (47.42%), Postives = 69/97 (71.13%), Query Frame = 2
Query:  596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 886
            +  +KPL DRVF+KV+ +EE TAGG+ L +A+KEKP IG V+AVGPG  +++G+R P+ +  G+ V+YSKYAG D K   G  ++ L   +++A +S
Sbjct:    8 VTTVKPLGDRVFVKVSPSEEKTAGGIFLPDAAKEKPQIGEVVAVGPGKRNDDGSRTPVEVGVGDKVLYSKYAGTDIK-LGGEEFVLLSEKDILAAVS 103          

HSP 2 Score: 95.1301 bits (235), Expect = 6.013e-19
Identity = 47/91 (51.65%), Postives = 64/91 (70.33%), Query Frame = 2
Query:  305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVV 574
            T++KPLGDRV VK+   EEKT GGIFLP AA+ KPQ GEVVAVG GK     ++  + V  G +V+YSKYAGT+++  G   +++ E D++
Sbjct:    9 TTVKPLGDRVFVKVSPSEEKTAGGIFLPDAAKEKPQIGEVVAVGPGKRNDDGSRTPVEVGVGDKVLYSKYAGTDIKLGGEEFVLLSEKDIL 99          
The following BLAST results are available for this feature:
BLAST of CK934815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_DESVH2.884e-2152.1310 kDa chaperonin OS=Desulfovibrio vulgaris (strai... [more]
CH10_DESVM3.766e-2153.1910 kDa chaperonin OS=Desulfovibrio vulgaris (strai... [more]
CH10_PROM56.424e-2148.4510 kDa chaperonin OS=Prochlorococcus marinus (stra... [more]
CH10_SYNPW8.390e-2148.9810 kDa chaperonin OS=Synechococcus sp. (strain WH7... [more]
CH10_DESHY8.390e-2151.0910 kDa chaperonin OS=Desulfitobacterium hafniense ... [more]
CH10_DESHD8.390e-2151.0910 kDa chaperonin OS=Desulfitobacterium hafniense ... [more]
CH10_DESDG8.390e-2150.0010 kDa chaperonin OS=Desulfovibrio desulfuricans (... [more]
CH10_THETN1.096e-2051.0910 kDa chaperonin OS=Thermoanaerobacter tengcongen... [more]
CH10_SYNP21.096e-2048.4510 kDa chaperonin OS=Synechococcus sp. (strain ATC... [more]
CH10_MICAN1.096e-2047.4210 kDa chaperonin OS=Microcystis aeruginosa (strai... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004226_E10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934815 ID=CK934815; Name=CK934815; organism=Citrus sinensis; type=EST; length=935bp
GGGGGTCTAGGGTTTTATCTTCTCGACTCTTCTTCAAATTTCAACTAGAA
ACCTTATCAAACTACTCGCTCGCTTCTCGCTTATCATTTCCAATCAGAAT
CTCTCTCGCTCTCTCTGCATCTGCAAGCAGATGGCGACAGCTCAGCTAAC
AGCGTCATCAATTAAGGTTCCAGCAAGGAGCTTGACTTCATTCGATGGTC
TCAGACCGTCTTCCGTCAAGTTCGCTTCCGTCGGAGGTGCTGCCAGCCAA
CGCTCTTTCCGTCGCTTGGTCGTTAAAGCCGCTGCAGTCGTGGCTCCCAA
GTACACTTCAATTAAACCTTTGGGTGATAGAGTGCTGGTGAAAATCAAGA
CTGTAGAGGAGAAAACTGATGGTGGTATTTTTCTGCCATCTGCAGCTCAA
ACAAAGCCTCAAGCAGGTGAGGTGGTAGCTGTTGGCGAGGGGAAGACAGT
TGGGAAGGCTAAACTGGACATATCTGTGAAGCCTGGGACCCAGGTCATCT
ATTCGAAGTATGCAGGGACTGAGTTGGAGTTCAACGGCGCAAATCATCTC
ATAGTGAGGGAGGATGACGTAGTTGGCATTCTTGAAACAGATGAAATCAA
GGATCTTAAGCCCCTTAATGACAGAGTTTTCATCAAGGTTGCTGAGGCTG
AGGAGACAACTGCTGGAGGTTTGTTGTTGACGGAGGCAAGCAAGGAGAAA
CCTTCCATTGGAACGGTCATTGCTGTTGGACCCGGTCCTCTAGATGAGGA
AGGTAATAGGAAACCTCTATCCATTGCACCAGGGAACACGGTGATGTATT
CGAAGTATGCAGGGAATGACTTCAAGGGCAGTGATGGTACCAACTACATT
GCTTTAAGAGCTTCTGAAGTGATGGCTGTGCTCTCTTAGTTGTCTGTGTT
TACTTGAGCGAGGCTTTATATGTATTAGTGAATTG
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