CK934815

Overview
NameCK934815
Unique NameCK934815
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_LACCB (10 kDa chaperonin OS=Lactobacillus casei (strain BL23) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18
Identity = 43/92 (46.74%), Postives = 63/92 (68.48%), Query Frame = 2 
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 880
            LKPL DRV ++V E EE T GG++L   +K+KP  G V+AVG G L  EG R P+++  G+TV+Y KYAG++ K  +G +Y+ L   ++MA+
Sbjct:    2 LKPLGDRVIVEVVEEEEQTVGGIVLANNAKQKPQTGKVVAVGEGALTPEGKRLPMAVKVGDTVLYDKYAGSEVK-YEGQDYLVLHEKDIMAI 92

HSP 2 Score: 89.7373 bits (221), Expect = 2.526e-17
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 2 
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 580
            +KPLGDRV+V++   EE+T GGI L + A+ KPQ G+VVAVGEG    + K L ++VK G  V+Y KYAG+E+++ G ++L++ E D++ I
Sbjct:    2 LKPLGDRVIVEVVEEEEQTVGGIVLANNAKQKPQTGKVVAVGEGALTPEGKRLPMAVKVGDTVLYDKYAGSEVKYEGQDYLVLHEKDIMAI 92
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_LACC3 (10 kDa chaperonin OS=Lactobacillus casei (strain ATCC 334) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18
Identity = 43/92 (46.74%), Postives = 63/92 (68.48%), Query Frame = 2 
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 880
            LKPL DRV ++V E EE T GG++L   +K+KP  G V+AVG G L  EG R P+++  G+TV+Y KYAG++ K  +G +Y+ L   ++MA+
Sbjct:    2 LKPLGDRVIVEVVEEEEQTVGGIVLANNAKQKPQTGKVVAVGEGALTPEGKRLPMAVKVGDTVLYDKYAGSEVK-YEGQDYLVLHEKDIMAI 92

HSP 2 Score: 89.7373 bits (221), Expect = 2.526e-17
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 2 
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 580
            +KPLGDRV+V++   EE+T GGI L + A+ KPQ G+VVAVGEG    + K L ++VK G  V+Y KYAG+E+++ G ++L++ E D++ I
Sbjct:    2 LKPLGDRVIVEVVEEEEQTVGGIVLANNAKQKPQTGKVVAVGEGALTPEGKRLPMAVKVGDTVLYDKYAGSEVKYEGQDYLVLHEKDIMAI 92
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_DESPS (10 kDa chaperonin OS=Desulfotalea psychrophila GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18
Identity = 46/93 (49.46%), Postives = 66/93 (70.97%), Query Frame = 2 
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 586
            I+PL DR+LVK    EEKT GGI +P +A+ KP  G+VVAVG GK      ++ + VK G  V++SKY GT+++ +G + LI+REDD++GI+E
Sbjct:    3 IRPLNDRLLVKRLAEEEKTAGGIIIPDSAKEKPAEGQVVAVGPGKVSDSGERVALQVKEGDLVLFSKYGGTDVKLDGEDFLIMREDDILGIME 95

HSP 2 Score: 87.4261 bits (215), Expect = 1.254e-16
Identity = 37/93 (39.78%), Postives = 64/93 (68.82%), Query Frame = 2 
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            ++PLNDR+ +K    EE TAGG+++ +++KEKP+ G V+AVGPG + + G R  L +  G+ V++SKY G D K  DG +++ +R  +++ ++
Sbjct:    3 IRPLNDRLLVKRLAEEEKTAGGIIIPDSAKEKPAEGQVVAVGPGKVSDSGERVALQVKEGDLVLFSKYGGTDVK-LDGEDFLIMREDDILGIM 94
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_CYAPA (10 kDa chaperonin, cyanelle OS=Cyanophora paradoxa GN=groS-A PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18
Identity = 42/100 (42.00%), Postives = 69/100 (69.00%), Query Frame = 2 
Query:  587 TDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 886
            T  +K ++PL +RV +KV+++EE TAGG+LL +  KEKP IG +IA GPG  +++G+ +PL +   + V+YSKYAG D K  +   Y+ L   +++A+++
Sbjct:    5 TLNVKTVRPLGERVLVKVSQSEEKTAGGILLPDTVKEKPQIGEIIAEGPGRRNDDGSFQPLEVTVNSKVLYSKYAGTDIK-LENEEYVLLSEKDILAIIA 103

HSP 2 Score: 81.6481 bits (200), Expect = 6.880e-15
Identity = 37/93 (39.78%), Postives = 60/93 (64.52%), Query Frame = 2 
Query:  308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLD-ISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +++PLG+RVLVK+   EEKT GGI LP   + KPQ GE++A G G+         + V   ++V+YSKYAGT+++     ++++ E D++ I+
Sbjct:   10 TVRPLGERVLVKVSQSEEKTAGGILLPDTVKEKPQIGEIIAEGPGRRNDDGSFQPLEVTVNSKVLYSKYAGTDIKLENEEYVLLSEKDILAII 102
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_CLONN (10 kDa chaperonin OS=Clostridium novyi (strain NT) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18
Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 2 
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 586
            IKPLGDRV++K    EEKT  GI LP +A+ KPQ  E+VAVG G  V   ++ + VK G +V++SKY+GTE++ +G  + I+R++D++ I+E
Sbjct:    3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVRMEVKVGDKVLFSKYSGTEVKLDGEEYTILRQNDILAIVE 94

HSP 2 Score: 76.2554 bits (186), Expect = 2.890e-13
Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 2 
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            +KPL DRV IK  EAEE T  G++L  ++KEKP    ++AVGPG L  +G    + +  G+ V++SKY+G + K  DG  Y  LR ++++A++
Sbjct:    3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGL-VDGKEVRMEVKVGDKVLFSKYSGTEVK-LDGEEYTILRQNDILAIV 93
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_CLOBO (10 kDa chaperonin OS=Clostridium botulinum GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18
Identity = 43/92 (46.74%), Postives = 67/92 (72.83%), Query Frame = 2 
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 586
            IKPLGDRV++K    EEKT  GI LP +A+ KPQ  E+VAVG G  V   ++++ VK G +V++S+YAG E++ +G  ++I+R++D++ I+E
Sbjct:    3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVNMEVKVGDRVLFSQYAGNEVKIDGEEYIILRQNDILAIVE 94

HSP 2 Score: 80.1073 bits (196), Expect = 2.002e-14
Identity = 41/93 (44.09%), Postives = 62/93 (66.67%), Query Frame = 2 
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            +KPL DRV IK  EAEE T  G++L  ++KEKP    ++AVGPG L  +G    + +  G+ V++S+YAGN+ K  DG  YI LR ++++A++
Sbjct:    3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGL-VDGKEVNMEVKVGDRVLFSQYAGNEVK-IDGEEYIILRQNDILAIV 93
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_BACHK (10 kDa chaperonin OS=Bacillus thuringiensis subsp. konkukian GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 2 
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93

HSP 2 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = 2 
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_BACCZ (10 kDa chaperonin OS=Bacillus cereus (strain ZK / E33L) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 2 
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93

HSP 2 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = 2 
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_BACCQ (10 kDa chaperonin OS=Bacillus cereus (strain Q1) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 2 
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93

HSP 2 Score: 91.2781 bits (225), Expect = 8.683e-18
Identity = 41/92 (44.57%), Postives = 66/92 (71.74%), Query Frame = 2 
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G  +I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDLIIFSKYAGTEVKYEGTDYLILRESDILAVI 93
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_BACCN (10 kDa chaperonin OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=groS PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.285e-18
Identity = 46/93 (49.46%), Postives = 67/93 (72.04%), Query Frame = 2 
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            LKPL DRV I++ +AEE TA G++L + +KEKP  G VIAVG G + E G R  L +A G+ +++SKYAG + K  +GT+Y+ LR S+++AV+
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDRIIFSKYAGTEVK-YEGTDYLILRESDILAVI 93

HSP 2 Score: 92.4337 bits (228), Expect = 3.897e-18
Identity = 41/92 (44.57%), Postives = 67/92 (72.83%), Query Frame = 2 
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +KPLGDRV++++   EEKT  GI LP  A+ KPQ G+V+AVG G+ +    ++ + V  G ++I+SKYAGTE+++ G ++LI+RE D++ ++
Sbjct:    2 LKPLGDRVVIELVQAEEKTASGIVLPDTAKEKPQEGKVIAVGTGRVLENGERVALEVAAGDRIIFSKYAGTEVKYEGTDYLILRESDILAVI 93
The following BLAST results are available for this feature:
BLAST of CK934815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_LACCB2.285e-1846.7410 kDa chaperonin OS=Lactobacillus casei (strain B... [more]
CH10_LACC32.285e-1846.7410 kDa chaperonin OS=Lactobacillus casei (strain A... [more]
CH10_DESPS2.285e-1849.4610 kDa chaperonin OS=Desulfotalea psychrophila GN=... [more]
CH10_CYAPA2.285e-1842.0010 kDa chaperonin, cyanelle OS=Cyanophora paradoxa... [more]
CH10_CLONN2.285e-1847.8310 kDa chaperonin OS=Clostridium novyi (strain NT)... [more]
CH10_CLOBO2.285e-1846.7410 kDa chaperonin OS=Clostridium botulinum GN=groS... [more]
CH10_BACHK2.285e-1849.4610 kDa chaperonin OS=Bacillus thuringiensis subsp.... [more]
CH10_BACCZ2.285e-1849.4610 kDa chaperonin OS=Bacillus cereus (strain ZK / ... [more]
CH10_BACCQ2.285e-1849.4610 kDa chaperonin OS=Bacillus cereus (strain Q1) G... [more]
CH10_BACCN2.285e-1849.4610 kDa chaperonin OS=Bacillus cereus subsp. cytoto... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004226_E10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934815 ID=CK934815; Name=CK934815; organism=Citrus sinensis; type=EST; length=935bp
GGGGGTCTAGGGTTTTATCTTCTCGACTCTTCTTCAAATTTCAACTAGAA
ACCTTATCAAACTACTCGCTCGCTTCTCGCTTATCATTTCCAATCAGAAT
CTCTCTCGCTCTCTCTGCATCTGCAAGCAGATGGCGACAGCTCAGCTAAC
AGCGTCATCAATTAAGGTTCCAGCAAGGAGCTTGACTTCATTCGATGGTC
TCAGACCGTCTTCCGTCAAGTTCGCTTCCGTCGGAGGTGCTGCCAGCCAA
CGCTCTTTCCGTCGCTTGGTCGTTAAAGCCGCTGCAGTCGTGGCTCCCAA
GTACACTTCAATTAAACCTTTGGGTGATAGAGTGCTGGTGAAAATCAAGA
CTGTAGAGGAGAAAACTGATGGTGGTATTTTTCTGCCATCTGCAGCTCAA
ACAAAGCCTCAAGCAGGTGAGGTGGTAGCTGTTGGCGAGGGGAAGACAGT
TGGGAAGGCTAAACTGGACATATCTGTGAAGCCTGGGACCCAGGTCATCT
ATTCGAAGTATGCAGGGACTGAGTTGGAGTTCAACGGCGCAAATCATCTC
ATAGTGAGGGAGGATGACGTAGTTGGCATTCTTGAAACAGATGAAATCAA
GGATCTTAAGCCCCTTAATGACAGAGTTTTCATCAAGGTTGCTGAGGCTG
AGGAGACAACTGCTGGAGGTTTGTTGTTGACGGAGGCAAGCAAGGAGAAA
CCTTCCATTGGAACGGTCATTGCTGTTGGACCCGGTCCTCTAGATGAGGA
AGGTAATAGGAAACCTCTATCCATTGCACCAGGGAACACGGTGATGTATT
CGAAGTATGCAGGGAATGACTTCAAGGGCAGTGATGGTACCAACTACATT
GCTTTAAGAGCTTCTGAAGTGATGGCTGTGCTCTCTTAGTTGTCTGTGTT
TACTTGAGCGAGGCTTTATATGTATTAGTGAATTG
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