CK934815

Overview
NameCK934815
Unique NameCK934815
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length935
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_CYAP7 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7424) GN=groS PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.096e-20
Identity = 45/94 (47.87%), Postives = 68/94 (72.34%), Query Frame = 2 
Query:  596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMA 877
            +  +KPL DRVF+KV+ +EE TAGG+LL + +KEKP +G V+AVGPG  +++G+R P+ +  G+ V+YSKYAG D K   G +Y+ L   +++A
Sbjct:    8 VSTVKPLGDRVFVKVSPSEEKTAGGILLPDTAKEKPQLGEVVAVGPGKRNDDGSRSPIEVKVGDKVLYSKYAGTDIK-LGGEDYVLLSEKDILA 100

HSP 2 Score: 93.9745 bits (232), Expect = 1.340e-18
Identity = 46/91 (50.55%), Postives = 65/91 (71.43%), Query Frame = 2 
Query:  305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVV 574
            +++KPLGDRV VK+   EEKT GGI LP  A+ KPQ GEVVAVG GK     ++  I VK G +V+YSKYAGT+++  G +++++ E D++
Sbjct:    9 STVKPLGDRVFVKVSPSEEKTAGGILLPDTAKEKPQLGEVVAVGPGKRNDDGSRSPIEVKVGDKVLYSKYAGTDIKLGGEDYVLLSEKDIL 99
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_PROMS (10 kDa chaperonin OS=Prochlorococcus marinus (strain AS9601) GN=groS PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.431e-20
Identity = 47/97 (48.45%), Postives = 70/97 (72.16%), Query Frame = 2 
Query:  596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 886
            +  +KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V  VGPG L+E+G+R+   ++ G+ V+YSKYAG D K   G  Y+ L   +++AV+S
Sbjct:    8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNEDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVVS 103

HSP 2 Score: 87.0409 bits (214), Expect = 1.637e-16
Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 2 
Query:  305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +++KPLGDR+ +K+   EEKT GGI LP +A+ KPQ GEV  VG GK     ++    V  G +V+YSKYAGT+++  G  ++++ E D++ ++
Sbjct:    9 STVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNEDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_SYNSC (10 kDa chaperonin OS=Synechococcus sp. (strain CC9605) GN=groS PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.869e-20
Identity = 47/98 (47.96%), Postives = 71/98 (72.45%), Query Frame = 2 
Query:  596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 886
            +  +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG  +++G+R+   +  G+ V+YSKYAG D K GSD   Y+ L   +++AV++
Sbjct:    8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDNVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103

HSP 2 Score: 85.1149 bits (209), Expect = 6.222e-16
Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 2 
Query:  305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +++KPLGDRV VK+   EEKT GGI LP  A+ KPQ GEVV VG GK           V  G  V+YSKYAGT+++     ++++ E D++ ++
Sbjct:    9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDNVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_PROMP (10 kDa chaperonin OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groS PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.869e-20
Identity = 46/96 (47.92%), Postives = 70/96 (72.92%), Query Frame = 2 
Query:  596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            +  +KPL DR+FIKV+E+EE TAGG+LL +++KEKP +G V  VGPG L+++G+R+   ++ G+ V+YSKYAG D K   G  Y+ L   +++AV+
Sbjct:    8 VSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVV 102

HSP 2 Score: 86.2705 bits (212), Expect = 2.793e-16
Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 2 
Query:  305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +++KPLGDR+ +K+   EEKT GGI LP +A+ KPQ GEV  VG GK     ++    V  G +V+YSKYAGT+++  G  ++++ E D++ ++
Sbjct:    9 STVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_SYNS9 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9902) GN=groS PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.441e-20
Identity = 47/98 (47.96%), Postives = 71/98 (72.45%), Query Frame = 2 
Query:  596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 886
            +  +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG  +E+G+R+   +  G+ V+YSKYAG D K GSD   Y+ L   +++A+++
Sbjct:    8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKPNEDGSRQAPEVGIGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAIVN 103

HSP 2 Score: 85.5001 bits (210), Expect = 4.764e-16
Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 2 
Query:  305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +++KPLGDRV VK+   EEKT GGI LP  A+ KPQ GEVV VG GK     ++    V  G +V+YSKYAGT+++     ++++ E D++ I+
Sbjct:    9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKPNEDGSRQAPEVGIGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAIV 102
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_PROMT (10 kDa chaperonin OS=Prochlorococcus marinus (strain NATL2A) GN=groS PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.441e-20
Identity = 48/98 (48.98%), Postives = 71/98 (72.45%), Query Frame = 2 
Query:  596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 886
            +  +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V  VGPG  +E+G+R+   ++ G+ V+YSKYAG D K GSD   Y+ L   +++AV++
Sbjct:    8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103

HSP 2 Score: 85.5001 bits (210), Expect = 4.764e-16
Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = 2 
Query:  305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +++KPLGDRV VK+   EEKT GGI LP  A+ KPQ GEV  VG GK     ++    V  G +V+YSKYAGT+++     ++++ E D++ ++
Sbjct:    9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_PROM1 (10 kDa chaperonin OS=Prochlorococcus marinus (strain NATL1A) GN=groS PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.441e-20
Identity = 48/98 (48.98%), Postives = 71/98 (72.45%), Query Frame = 2 
Query:  596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 886
            +  +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V  VGPG  +E+G+R+   ++ G+ V+YSKYAG D K GSD   Y+ L   +++AV++
Sbjct:    8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103

HSP 2 Score: 85.5001 bits (210), Expect = 4.764e-16
Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = 2 
Query:  305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +++KPLGDRV VK+   EEKT GGI LP  A+ KPQ GEV  VG GK     ++    V  G +V+YSKYAGT+++     ++++ E D++ ++
Sbjct:    9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSVGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_EXISA (10 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groS PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.441e-20
Identity = 49/92 (53.26%), Postives = 67/92 (72.83%), Query Frame = 2 
Query:  311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +KPLGDRV++++   EEKT GGI LP  A+ KPQ G+VVAVG G+   + K +D+ VK    VIYSKYAGTE++ +G  +LIVRE D++ I+
Sbjct:    2 LKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVKHDGKEYLIVRESDILAIV 93

HSP 2 Score: 90.5077 bits (223), Expect = 1.481e-17
Identity = 44/93 (47.31%), Postives = 63/93 (67.74%), Query Frame = 2 
Query:  605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883
            LKPL DRV I+V E EE T GG++L + +KEKP  G V+AVG G + +EG R  L +   + V+YSKYAG + K  DG  Y+ +R S+++A++
Sbjct:    2 LKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKRIDLDVKENDLVIYSKYAGTEVK-HDGKEYLIVRESDILAIV 93
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_PROM4 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9211) GN=groS PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.188e-20
Identity = 48/98 (48.98%), Postives = 70/98 (71.43%), Query Frame = 2 
Query:  596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 886
            +  +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V  VGPG  +E+G+R+   +  G+ V+YSKYAG D K GSD   Y+ L   +++AV++
Sbjct:    8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSD--EYVLLSEKDILAVVN 103

HSP 2 Score: 83.9593 bits (206), Expect = 1.386e-15
Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = 2 
Query:  305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +++KPLGDRV VK+   EEKT GGI LP  A+ KPQ GEV  VG GK     ++    V  G +V+YSKYAGT+++     ++++ E D++ ++
Sbjct:    9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQAPEVGVGDKVLYSKYAGTDIKLGSDEYVLLSEKDILAVV 102
[Close]
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_PROM2 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9215) GN=groS PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.188e-20
Identity = 46/97 (47.42%), Postives = 70/97 (72.16%), Query Frame = 2 
Query:  596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 886
            +  +KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V  VGPG L+++G+R+   ++ G+ V+YSKYAG D K   G  Y+ L   +++AV+S
Sbjct:    8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVVS 103

HSP 2 Score: 86.6557 bits (213), Expect = 2.139e-16
Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 2 
Query:  305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583
            +++KPLGDR+ +K+   EEKT GGI LP +A+ KPQ GEV  VG GK     ++    V  G +V+YSKYAGT+++  G  ++++ E D++ ++
Sbjct:    9 STVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
The following BLAST results are available for this feature:
BLAST of CK934815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH10_CYAP71.096e-2047.8710 kDa chaperonin OS=Cyanothece sp. (strain PCC 74... [more]
CH10_PROMS1.431e-2048.4510 kDa chaperonin OS=Prochlorococcus marinus (stra... [more]
CH10_SYNSC1.869e-2047.9610 kDa chaperonin OS=Synechococcus sp. (strain CC9... [more]
CH10_PROMP1.869e-2047.9210 kDa chaperonin OS=Prochlorococcus marinus subsp... [more]
CH10_SYNS92.441e-2047.9610 kDa chaperonin OS=Synechococcus sp. (strain CC9... [more]
CH10_PROMT2.441e-2048.9810 kDa chaperonin OS=Prochlorococcus marinus (stra... [more]
CH10_PROM12.441e-2048.9810 kDa chaperonin OS=Prochlorococcus marinus (stra... [more]
CH10_EXISA2.441e-2053.2610 kDa chaperonin OS=Exiguobacterium sp. (strain A... [more]
CH10_PROM43.188e-2048.9810 kDa chaperonin OS=Prochlorococcus marinus (stra... [more]
CH10_PROM23.188e-2047.4210 kDa chaperonin OS=Prochlorococcus marinus (stra... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004226_E10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IF_E10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934815 ID=CK934815; Name=CK934815; organism=Citrus sinensis; type=EST; length=935bp
GGGGGTCTAGGGTTTTATCTTCTCGACTCTTCTTCAAATTTCAACTAGAA
ACCTTATCAAACTACTCGCTCGCTTCTCGCTTATCATTTCCAATCAGAAT
CTCTCTCGCTCTCTCTGCATCTGCAAGCAGATGGCGACAGCTCAGCTAAC
AGCGTCATCAATTAAGGTTCCAGCAAGGAGCTTGACTTCATTCGATGGTC
TCAGACCGTCTTCCGTCAAGTTCGCTTCCGTCGGAGGTGCTGCCAGCCAA
CGCTCTTTCCGTCGCTTGGTCGTTAAAGCCGCTGCAGTCGTGGCTCCCAA
GTACACTTCAATTAAACCTTTGGGTGATAGAGTGCTGGTGAAAATCAAGA
CTGTAGAGGAGAAAACTGATGGTGGTATTTTTCTGCCATCTGCAGCTCAA
ACAAAGCCTCAAGCAGGTGAGGTGGTAGCTGTTGGCGAGGGGAAGACAGT
TGGGAAGGCTAAACTGGACATATCTGTGAAGCCTGGGACCCAGGTCATCT
ATTCGAAGTATGCAGGGACTGAGTTGGAGTTCAACGGCGCAAATCATCTC
ATAGTGAGGGAGGATGACGTAGTTGGCATTCTTGAAACAGATGAAATCAA
GGATCTTAAGCCCCTTAATGACAGAGTTTTCATCAAGGTTGCTGAGGCTG
AGGAGACAACTGCTGGAGGTTTGTTGTTGACGGAGGCAAGCAAGGAGAAA
CCTTCCATTGGAACGGTCATTGCTGTTGGACCCGGTCCTCTAGATGAGGA
AGGTAATAGGAAACCTCTATCCATTGCACCAGGGAACACGGTGATGTATT
CGAAGTATGCAGGGAATGACTTCAAGGGCAGTGATGGTACCAACTACATT
GCTTTAAGAGCTTCTGAAGTGATGGCTGTGCTCTCTTAGTTGTCTGTGTT
TACTTGAGCGAGGCTTTATATGTATTAGTGAATTG
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