CK934815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_SYNP6 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.103e-20 Identity = 46/98 (46.94%), Postives = 72/98 (73.47%), Query Frame = 2 Query: 596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 886 + + PL DRVF+KVAEAEE TAGG++L + +KEKP +G ++AVGPG +++G+R+ + G+ V+YSKYAG D K G+D +Y+ L +++AV++ Sbjct: 8 VSTVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGND--DYVLLSEKDILAVVA 103 HSP 2 Score: 87.0409 bits (214), Expect = 1.637e-16 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583 +++ PLGDRV VK+ EEKT GGI LP A+ KPQ GE+VAVG GK VK G +V+YSKYAGT+++ +++++ E D++ ++ Sbjct: 9 STVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGNDDYVLLSEKDILAVV 102
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_SYNE7 (10 kDa chaperonin OS=Synechococcus elongatus (strain PCC 7942) GN=groS PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 7.103e-20 Identity = 46/98 (46.94%), Postives = 72/98 (73.47%), Query Frame = 2 Query: 596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFK-GSDGTNYIALRASEVMAVLS 886 + + PL DRVF+KVAEAEE TAGG++L + +KEKP +G ++AVGPG +++G+R+ + G+ V+YSKYAG D K G+D +Y+ L +++AV++ Sbjct: 8 VSTVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGND--DYVLLSEKDILAVVA 103 HSP 2 Score: 87.0409 bits (214), Expect = 1.637e-16 Identity = 42/94 (44.68%), Postives = 62/94 (65.96%), Query Frame = 2 Query: 305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583 +++ PLGDRV VK+ EEKT GGI LP A+ KPQ GE+VAVG GK VK G +V+YSKYAGT+++ +++++ E D++ ++ Sbjct: 9 STVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEVKIGDKVLYSKYAGTDIKLGNDDYVLLSEKDILAVV 102
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_BEUC1 (10 kDa chaperonin OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=groS PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 7.103e-20 Identity = 45/93 (48.39%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883 +KPL DR+ +K EAE+TTA GL++ + +KEKP G V+A+GPG +D+ GNR P+ +A G+ V+YSKY G + K + G Y+ L A +V+AV+ Sbjct: 5 IKPLEDRIVVKTLEAEQTTASGLVIPDTAKEKPQEGEVLAIGPGRVDDNGNRVPVDVAVGDVVIYSKYGGTEVKYA-GQEYLILSARDVLAVV 96 HSP 2 Score: 79.7221 bits (195), Expect = 2.614e-14 Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 586 SIKPL DR++VK E+ T G+ +P A+ KPQ GEV+A+G G+ ++ + V G VIYSKY GTE+++ G +LI+ DV+ +++ Sbjct: 4 SIKPLEDRIVVKTLEAEQTTASGLVIPDTAKEKPQEGEVLAIGPGRVDDNGNRVPVDVAVGDVVIYSKYGGTEVKYAGQEYLILSARDVLAVVQ 97
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_TRIEI (10 kDa chaperonin OS=Trichodesmium erythraeum (strain IMS101) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20 Identity = 43/100 (43.00%), Postives = 70/100 (70.00%), Query Frame = 2 Query: 587 TDEIKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 886 T + +KPL +RVF+KV+E+EE TAGG+LL +++KEKP +G V++ GPG +++G R + + G+ V+YSKYAG D K G Y+ L +++A+++ Sbjct: 5 TLSVSTVKPLGERVFVKVSESEEKTAGGILLPDSAKEKPQVGEVVSAGPGKRNDDGTRAEMEVKVGDKVLYSKYAGTDIK-LGGDEYVLLAEKDILAIVN 103 HSP 2 Score: 91.6633 bits (226), Expect = 6.648e-18 Identity = 43/94 (45.74%), Postives = 66/94 (70.21%), Query Frame = 2 Query: 305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583 +++KPLG+RV VK+ EEKT GGI LP +A+ KPQ GEVV+ G GK + ++ VK G +V+YSKYAGT+++ G ++++ E D++ I+ Sbjct: 9 STVKPLGERVFVKVSESEEKTAGGILLPDSAKEKPQVGEVVSAGPGKRNDDGTRAEMEVKVGDKVLYSKYAGTDIKLGGDEYVLLAEKDILAIV 102
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_SYNPX (10 kDa chaperonin OS=Synechococcus sp. (strain WH8102) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20 Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = 2 Query: 596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 886 + +KPL DRVFIKV+E+EE TAGG+LL + +KEKP +G V+ VGPG +++G+R+ + G+ V+YSKYAG D K G ++ L +++A+++ Sbjct: 8 VSTVKPLGDRVFIKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIK-LGGDEFVLLTEKDILAIVN 103 HSP 2 Score: 86.6557 bits (213), Expect = 2.139e-16 Identity = 43/94 (45.74%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583 +++KPLGDRV +K+ EEKT GGI LP A+ KPQ GEVV VG GK V G +V+YSKYAGT+++ G +++ E D++ I+ Sbjct: 9 STVKPLGDRVFIKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLGGDEFVLLTEKDILAIV 102
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_PROMM (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9313) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20 Identity = 45/97 (46.39%), Postives = 69/97 (71.13%), Query Frame = 2 Query: 596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 886 + +KPL DRVF+KV+E+EE TAGG+LL + +KEKP +G V+ VGPG +++G+R+ + G+ V+YSKYAG D K S Y+ L +++AV++ Sbjct: 8 VSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLST-DEYVLLSEKDILAVVN 103 HSP 2 Score: 85.1149 bits (209), Expect = 6.222e-16 Identity = 42/94 (44.68%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDI-SVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583 +++KPLGDRV VK+ EEKT GGI LP A+ KPQ GEVV VG GK V G +V+YSKYAGT+++ + ++++ E D++ ++ Sbjct: 9 STVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGVGDKVLYSKYAGTDIKLSTDEYVLLSEKDILAVV 102
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_PROM9 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9312) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20 Identity = 45/96 (46.88%), Postives = 69/96 (71.88%), Query Frame = 2 Query: 596 IKDLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883 + +KPL DR+FIKV+ +EE TAGG+LL +++KEKP +G V VGPG L+++G+R+ ++ G+ V+YSKYAG D K G Y+ L +++AV+ Sbjct: 8 VSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIK-LGGDEYVLLSEKDILAVV 102 HSP 2 Score: 86.6557 bits (213), Expect = 2.139e-16 Identity = 40/94 (42.55%), Postives = 63/94 (67.02%), Query Frame = 2 Query: 305 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583 +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ GEV VG GK ++ V G +V+YSKYAGT+++ G ++++ E D++ ++ Sbjct: 9 STVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSIGDKVLYSKYAGTDIKLGGDEYVLLSEKDILAVV 102
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_NOCSJ (10 kDa chaperonin OS=Nocardioides sp. (strain BAA-499 / JS614) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20 Identity = 45/95 (47.37%), Postives = 68/95 (71.58%), Query Frame = 2 Query: 602 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 886 ++KPL DR+ +K +AE+TTA GL++ + +KEKP G V+A+GPG +D+ GNR PL + G+ V+YSKY G + K + G Y+ L A +V+AV+S Sbjct: 4 NIKPLEDRIVVKPLDAEQTTASGLVIPDTAKEKPQEGEVLAIGPGRIDDNGNRVPLDVTVGDKVIYSKYGGTEVKYA-GEEYLILSARDVLAVVS 97 HSP 2 Score: 77.7962 bits (190), Expect = 9.934e-14 Identity = 40/95 (42.11%), Postives = 62/95 (65.26%), Query Frame = 2 Query: 308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK---TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583 +IKPL DR++VK E+ T G+ +P A+ KPQ GEV+A+G G+ + LD++V G +VIYSKY GTE+++ G +LI+ DV+ ++ Sbjct: 4 NIKPLEDRIVVKPLDAEQTTASGLVIPDTAKEKPQEGEVLAIGPGRIDDNGNRVPLDVTV--GDKVIYSKYGGTEVKYAGEEYLILSARDVLAVV 96
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_MYCTU (10 kDa chaperonin OS=Mycobacterium tuberculosis GN=groS PE=1 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20 Identity = 47/96 (48.96%), Postives = 70/96 (72.92%), Query Frame = 2 Query: 602 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 886 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL +A G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99 HSP 2 Score: 81.2629 bits (199), Expect = 8.985e-15 Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583 +IKPL D++LV+ E T G+ +P A+ KPQ G VVAVG G+ G+ ++ + V G VIYSKY GTE+++NG +LI+ DV+ ++ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_MYCTA (10 kDa chaperonin OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=groS PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20 Identity = 47/96 (48.96%), Postives = 70/96 (72.92%), Query Frame = 2 Query: 602 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVLS 886 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL +A G+TV+YSKY G + K +G Y+ L A +V+AV+S Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIK-YNGEEYLILSARDVLAVVS 99 HSP 2 Score: 81.2629 bits (199), Expect = 8.985e-15 Identity = 40/94 (42.55%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583 +IKPL D++LV+ E T G+ +P A+ KPQ G VVAVG G+ G+ ++ + V G VIYSKY GTE+++NG +LI+ DV+ ++ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVV 98 The following BLAST results are available for this feature:
BLAST of CK934815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934815 ID=CK934815; Name=CK934815; organism=Citrus sinensis; type=EST; length=935bpback to top |