CK934815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_BACHD (10 kDa chaperonin OS=Bacillus halodurans GN=groS PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 7.853e-19 Identity = 47/92 (51.09%), Postives = 65/92 (70.65%), Query Frame = 2 Query: 311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK-TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583 +KPLGDRV+++ EEKT GI LP A+ KPQ G VVAVG G+ T K+ + VK G VI+SKYAGTE++++G +LI+RE D++ I+ Sbjct: 2 LKPLGDRVVIEQVETEEKTASGIVLPDTAKEKPQEGRVVAVGTGRVTENGEKIALEVKEGDSVIFSKYAGTEVKYDGKEYLILRESDILAII 93 HSP 2 Score: 88.5817 bits (218), Expect = 5.628e-17 Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 2 Query: 605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883 LKPL DRV I+ E EE TA G++L + +KEKP G V+AVG G + E G + L + G++V++SKYAG + K DG Y+ LR S+++A++ Sbjct: 2 LKPLGDRVVIEQVETEEKTASGIVLPDTAKEKPQEGRVVAVGTGRVTENGEKIALEVKEGDSVIFSKYAGTEVK-YDGKEYLILRESDILAII 93
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_ARTCA (10 kDa chaperonin OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=groS PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.853e-19 Identity = 45/93 (48.39%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883 +KPL DR+ ++ EAE+TTA GLL+ ++++EKP G V+AVGPG E+GNR P+ +A G+ V+YSKY G + K + GT Y+ L A +V+A++ Sbjct: 5 IKPLEDRIVVRPLEAEQTTASGLLIPDSAQEKPQEGEVVAVGPGRF-EDGNRVPVDVAVGDVVIYSKYGGTEVK-TGGTEYLVLSARDVLAIV 95 HSP 2 Score: 82.8037 bits (203), Expect = 3.088e-15 Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583 SIKPL DR++V+ E+ T G+ +P +AQ KPQ GEVVAVG G+ ++ + V G VIYSKY GTE++ G +L++ DV+ I+ Sbjct: 4 SIKPLEDRIVVRPLEAEQTTASGLLIPDSAQEKPQEGEVVAVGPGRFEDGNRVPVDVAVGDVVIYSKYGGTEVKTGGTEYLVLSARDVLAIV 95
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_RENSM (10 kDa chaperonin OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=groS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.026e-18 Identity = 42/93 (45.16%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883 +KPL DR+ ++ +AE+TTA GL++ +++KEKP G V+AVGPG +D+ GNR P+ +A G+ V+YSKY G + K + G + L A +V+A++ Sbjct: 5 IKPLEDRIVVRQLDAEQTTASGLVIPDSAKEKPQEGEVVAVGPGRVDDNGNRVPVDVAVGDVVLYSKYGGTEVK-TGGEELLVLSARDVLAIV 96 HSP 2 Score: 75.0998 bits (183), Expect = 6.439e-13 Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 2 Query: 308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKA-KLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583 SIKPL DR++V+ E+ T G+ +P +A+ KPQ GEVVAVG G+ ++ + V G V+YSKY GTE++ G L++ DV+ I+ Sbjct: 4 SIKPLEDRIVVRQLDAEQTTASGLVIPDSAKEKPQEGEVVAVGPGRVDDNGNRVPVDVAVGDVVLYSKYGGTEVKTGGEELLVLSARDVLAIV 96
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_GEOUR (10 kDa chaperonin OS=Geobacter uraniireducens (strain Rf4) GN=groS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.026e-18 Identity = 45/93 (48.39%), Postives = 65/93 (69.89%), Query Frame = 2 Query: 311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 586 ++P+ DR++VK E KT GGIF+P A+ KP GEVVAVG GK K L + VK G +V++ KY+GTE++ G + LI+REDD++G++E Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIFIPETAKEKPMEGEVVAVGNGKRTEDGKVLPLDVKVGDKVLFGKYSGTEIKVEGQDFLIMREDDILGVIE 95 HSP 2 Score: 78.5666 bits (192), Expect = 5.824e-14 Identity = 35/93 (37.63%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883 L+P+ DR+ +K E E TAGG+ + E +KEKP G V+AVG G E+G PL + G+ V++ KY+G + K +G +++ +R +++ V+ Sbjct: 3 LRPMQDRIIVKRVEEETKTAGGIFIPETAKEKPMEGEVVAVGNGKRTEDGKVLPLDVKVGDKVLFGKYSGTEIK-VEGQDFLIMREDDILGVI 94
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_GEOMG (10 kDa chaperonin OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=groS PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.026e-18 Identity = 45/93 (48.39%), Postives = 66/93 (70.97%), Query Frame = 2 Query: 311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGKAK-LDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGILE 586 ++PL DR+LVK E+ T GGIF+P A+ KPQ GE+VAVG GK K + I +K G +V++ KYAGT+++ G + LI+REDD++G++E Sbjct: 3 LRPLQDRILVKRIEEEQVTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPIDLKVGDKVLFGKYAGTDIKVEGEDFLIMREDDILGVIE 95 HSP 2 Score: 80.4925 bits (197), Expect = 1.533e-14 Identity = 35/93 (37.63%), Postives = 60/93 (64.52%), Query Frame = 2 Query: 605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883 L+PL DR+ +K E E+ TAGG+ + + +KEKP G ++AVG G E+G P+ + G+ V++ KYAG D K +G +++ +R +++ V+ Sbjct: 3 LRPLQDRILVKRIEEEQVTAGGIFIPDTAKEKPQRGEIVAVGNGKKTEDGKVIPIDLKVGDKVLFGKYAGTDIK-VEGEDFLIMREDDILGVI 94
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_NOCFA (10 kDa chaperonin OS=Nocardia farcinica GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.340e-18 Identity = 45/95 (47.37%), Postives = 67/95 (70.53%), Query Frame = 2 Query: 602 DLKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRK-PLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAVL 883 ++KPL D++ ++ EAE TTA GL++ + +KEKP GTV+AVGPG DE+G ++ PL + G+TV+YSKY G + K G Y+ L A +V+AV+ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVQEGDTVIYSKYGGTEIK-YQGEEYLILSARDVLAVV 98 HSP 2 Score: 79.7221 bits (195), Expect = 2.614e-14 Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 308 SIKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGK--TVGKAKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGIL 583 +IKPL D++LV+ E T G+ +P A+ KPQ G VVAVG G+ G+ ++ + V+ G VIYSKY GTE+++ G +LI+ DV+ ++ Sbjct: 5 NIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVQEGDTVIYSKYGGTEIKYQGEEYLILSARDVLAVV 98
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_LISMO (10 kDa chaperonin OS=Listeria monocytogenes GN=groS PE=3 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.340e-18 Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 880 LKPL DRV I+V EAEE TA G++L +++KEKP G ++AVG G + + G ++PL +A G+TV+++KY+G + +GT+Y+ LR S+++A+ Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92 HSP 2 Score: 90.8929 bits (224), Expect = 1.134e-17 Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 580 +KPLGDRV++++ EEKT GI LP +A+ KPQ+G++VAVG G+ + K + V G VI++KY+GTE+ + G ++LI+RE D++ I Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_LISMH (10 kDa chaperonin OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.340e-18 Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 880 LKPL DRV I+V EAEE TA G++L +++KEKP G ++AVG G + + G ++PL +A G+TV+++KY+G + +GT+Y+ LR S+++A+ Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92 HSP 2 Score: 90.8929 bits (224), Expect = 1.134e-17 Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 580 +KPLGDRV++++ EEKT GI LP +A+ KPQ+G++VAVG G+ + K + V G VI++KY+GTE+ + G ++LI+RE D++ I Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_LISMF (10 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain F2365) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.340e-18 Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 880 LKPL DRV I+V EAEE TA G++L +++KEKP G ++AVG G + + G ++PL +A G+TV+++KY+G + +GT+Y+ LR S+++A+ Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92 HSP 2 Score: 90.8929 bits (224), Expect = 1.134e-17 Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 580 +KPLGDRV++++ EEKT GI LP +A+ KPQ+G++VAVG G+ + K + V G VI++KY+GTE+ + G ++LI+RE D++ I Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92
BLAST of CK934815 vs. ExPASy Swiss-Prot
Match: CH10_LISMC (10 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=groS PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.340e-18 Identity = 43/92 (46.74%), Postives = 69/92 (75.00%), Query Frame = 2 Query: 605 LKPLNDRVFIKVAEAEETTAGGLLLTEASKEKPSIGTVIAVGPGPLDEEGNRKPLSIAPGNTVMYSKYAGNDFKGSDGTNYIALRASEVMAV 880 LKPL DRV I+V EAEE TA G++L +++KEKP G ++AVG G + + G ++PL +A G+TV+++KY+G + +GT+Y+ LR S+++A+ Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVT-YEGTDYLILRESDILAI 92 HSP 2 Score: 90.8929 bits (224), Expect = 1.134e-17 Identity = 42/91 (46.15%), Postives = 65/91 (71.43%), Query Frame = 2 Query: 311 IKPLGDRVLVKIKTVEEKTDGGIFLPSAAQTKPQAGEVVAVGEGKTVGK-AKLDISVKPGTQVIYSKYAGTELEFNGANHLIVREDDVVGI 580 +KPLGDRV++++ EEKT GI LP +A+ KPQ+G++VAVG G+ + K + V G VI++KY+GTE+ + G ++LI+RE D++ I Sbjct: 2 LKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGSGRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAI 92 The following BLAST results are available for this feature:
BLAST of CK934815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934815 ID=CK934815; Name=CK934815; organism=Citrus sinensis; type=EST; length=935bpback to top |