CK934830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_VIBPA (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio parahaemolyticus GN=ubiB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.766e-16 Identity = 46/118 (38.98%), Postives = 72/118 (61.02%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +LR L LGP +IK GQ+++ R D+ + L +LQD V F ++A +E+ LG PLE F++ + +A+AS+ QV+ A L++T ++V +KV RP I P+I DL L +A Sbjct: 56 RLRLALQELGPVWIKFGQMMSTRRDLFPPHIADPLALLQDQVAPFDGELAKQQMEKALGGPLENWFTEFDIKPLASASIAQVHTARLKDTNQEVVLKVIRPDIRPVIDSDLKLMHRMA 173
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_VIBHB (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=ubiB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.766e-16 Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 +LR L LGP +IK GQ+++ R D+ + L +LQD V F Q+A +E LG PL+ F++ + +A+AS+ QV+ A L++T ++V +KV RP I P+I DL L +AS Sbjct: 56 RLRLALQELGPVWIKFGQMMSTRRDLFPPHIADPLALLQDQVAPFDGQLAKEQMELALGGPLQNWFTEFDIKPLASASIAQVHTARLKDTNQEVVLKVIRPDIRPVIDSDLKLMHRMAS 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_PHOLL (Probable ubiquinone biosynthesis protein ubiB OS=Photorhabdus luminescens subsp. laumondii GN=ubiB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.766e-16 Identity = 50/120 (41.67%), Postives = 70/120 (58.33%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASF 885 +LR L LGP +IK GQ+L+ R D+ ++L +LQD V SF +A IE LG LE F +A+AS+ QV+ A L+E G+++ IKV RP I PII D+ L LA++ Sbjct: 56 RLRLALQELGPVWIKFGQMLSTRRDLFPPAIADQLALLQDRVASFDGALARQYIETALGGALETWFDDFEPIALASASIAQVHTARLKENGQEIVIKVIRPDILPIIKADIRLMYRLANW 175
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_ALISL (Probable ubiquinone biosynthesis protein ubiB OS=Aliivibrio salmonicida (strain LFI1238) GN=ubiB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.766e-16 Identity = 51/146 (34.93%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 451 GLYWSNLTYDCLVGRDKEVVPDR--ARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 GL+W Y P++ +LR L LGP +IK GQ+++ R D+ ++L +LQD V F Q+A + +E LG PLE F+ +A+AS+ QV+ A L+E+G ++ +KV RP I P+I D+ L +A+ Sbjct: 40 GLFWIKNRY-----------PEKPLGERLRLALQELGPVWIKFGQMMSTRRDLFPPHLADQLALLQDQVAPFDGQLAKDQMELSLGGPLENWFTDFDIVPLASASIAQVHTAKLKESGREIVLKVIRPDIRPVIEADIRLMYRMAT 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_XANOR (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas oryzae pv. oryzae GN=ubiB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.530e-16 Identity = 50/129 (38.76%), Postives = 71/129 (55.04%), Query Frame = 1 Query: 508 VPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATL----RETGEDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 V R +LR L LGP F+K GQ+L+ R D++ D EL +LQD V F + A I+E LG P+ F+ + +A+AS+ QV+ ATL +V +KV RP IE I D+ L +LA+ Sbjct: 48 VQSRGARLRLALQELGPIFVKFGQILSTRRDLIPADVAEELTLLQDRVKPFDGEAARLIVERALGLPVSVAFASFDTVPLASASIAQVHAATLPPDANGVRREVVVKVLRPEIERQIDADIALLHSLAT 176
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_XANOP (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ubiB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.530e-16 Identity = 50/129 (38.76%), Postives = 71/129 (55.04%), Query Frame = 1 Query: 508 VPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATL----RETGEDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 V R +LR L LGP F+K GQ+L+ R D++ D EL +LQD V F + A I+E LG P+ F+ + +A+AS+ QV+ ATL +V +KV RP IE I D+ L +LA+ Sbjct: 48 VQSRGARLRLALQELGPIFVKFGQILSTRRDLIPADVAEELTLLQDRVKPFDGEAARLIVERALGLPVSVAFASFDTVPLASASIAQVHAATLPPDANGVRREVVVKVLRPEIERQIDADIALLHSLAT 176
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_XANOM (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ubiB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.530e-16 Identity = 50/129 (38.76%), Postives = 71/129 (55.04%), Query Frame = 1 Query: 508 VPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATL----RETGEDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 V R +LR L LGP F+K GQ+L+ R D++ D EL +LQD V F + A I+E LG P+ F+ + +A+AS+ QV+ ATL +V +KV RP IE I D+ L +LA+ Sbjct: 48 VQSRGARLRLALQELGPIFVKFGQILSTRRDLIPADVAEELTLLQDRVKPFDGEAARLIVERALGLPVSVAFASFDTVPLASASIAQVHAATLPPDANGVRREVVVKVLRPEIERQIDADIALLHSLAT 176
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_XANC5 (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ubiB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.530e-16 Identity = 50/126 (39.68%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 517 RARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATL----RETGEDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 R +LR L LGP F+K GQ+L+ R D++ D EL +LQD V F Q A I+E LG P+ F+ + +A+AS+ QV+ ATL +V +KV RP IE I D+ L +LA+ Sbjct: 51 RGARLRLALQELGPIFVKFGQILSTRRDLIPADVAEELTLLQDRVKPFDGQAARLIVEAALGLPVSVAFASFDTVPLASASIAQVHAATLPPDANGVRREVVVKVLRPDIERQIDADIALLHSLAT 176
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_VIBCM (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio cholerae serotype O1 (strain M66-2) GN=ubiB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.530e-16 Identity = 49/118 (41.53%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +LR L LGP +IK GQ+++ R D+ + L +LQD V F A +IEEELG PLE F + +A+AS+ QV+ A L+ G DV +KV RP I P I D+ L +A Sbjct: 56 RLRLALQELGPVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVA 173
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_VIBCH (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio cholerae GN=ubiB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.530e-16 Identity = 49/118 (41.53%), Postives = 67/118 (56.78%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +LR L LGP +IK GQ+++ R D+ + L +LQD V F A +IEEELG PLE F + +A+AS+ QV+ A L+ G DV +KV RP I P I D+ L +A Sbjct: 56 RLRLALQELGPVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVA 173 The following BLAST results are available for this feature:
BLAST of CK934830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934830 ID=CK934830; Name=CK934830; organism=Citrus sinensis; type=EST; length=885bpback to top |