CK934830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_VARPS (Probable ubiquinone biosynthesis protein ubiB OS=Variovorax paradoxus (strain S110) GN=ubiB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19 Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 1 Query: 487 VGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLR-ETGE--DVAIKVQRPGIEPIIYRDLFLFRTLASF 885 +GR+ + R ++LR L LGP F+K GQVL+ R D++ D +EL LQD VP FP+ VA IE RP+ VF + IA+AS+ QV+ AT+R + GE +VA+KV RP + +I +DL L +A + Sbjct: 41 IGRNLDA--PRGQRLREALERLGPIFVKFGQVLSTRRDLLPPDIADELAFLQDRVPPFPSAVAIATIERAFRRPVGDVFVQFDETPIASASIAQVHFATIRTDEGEVREVAVKVLRPSMRGVIEKDLALMAMMAGW 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHESR (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain MR-7) GN=ubiB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 493 RDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 R+K +L+ + LGP +IK GQ+L+ R D++ +++ NEL +LQD VP F +A IE EL P+E+ F + +A+AS+ QV+ ATL+ G+ V +KV RP +E I DL L A Sbjct: 45 RNKHKGKSGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWANELAMLQDKVPPFDGALARQAIEAELKAPIESFFDDFNETPLASASISQVHTATLKSNGKAVVLKVLRPNVEAKIQADLLLMSQTA 173
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHESM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain MR-4) GN=ubiB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 7.277e-19 Identity = 50/129 (38.76%), Postives = 75/129 (58.14%), Query Frame = 1 Query: 493 RDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 R+K +L+ + LGP +IK GQ+L+ R D++ +++ NEL +LQD VP F +A IE EL P+E+ F + +A+AS+ QV+ ATL+ G+ V +KV RP +E I DL L A Sbjct: 45 RNKHKGKSGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWANELAMLQDKVPPFDGALARQAIETELKAPIESFFDDFNETPLASASISQVHTATLKSNGKAVVLKVLRPNVEAKIQADLLLMSQTA 173
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHESA (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain ANA-3) GN=ubiB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.504e-19 Identity = 50/129 (38.76%), Postives = 74/129 (57.36%), Query Frame = 1 Query: 493 RDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 R+K +L+ + LGP +IK GQ+L+ R D++ +++ NEL +LQD VP F +A IE EL P+E+ F +A+AS+ QV+ ATL+ G+ V +KV RP +E I DL L A Sbjct: 45 RNKHKGKSGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWANELAMLQDKVPPFDGALARQAIEAELKAPIESYFDDFDETPLASASISQVHTATLKSNGKAVVLKVLRPNVETKIQADLLLMSQTA 173
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB5 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=ubiB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.504e-19 Identity = 50/129 (38.76%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 493 RDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 R+K +L+ + LGP +IK GQ+L+ R D++ +++ +EL +LQD VP F +A IE EL P+E++F + +A+AS+ QV+ ATL+ G+DV +KV RP +E I DL L A Sbjct: 45 RNKHKNKPGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWASELAMLQDKVPPFDGALARQAIEAELKAPIESLFDDFNEIPLASASISQVHTATLKSNGKDVVLKVLRPNVETKIQADLQLMSQTA 173
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB2 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS223) GN=ubiB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.504e-19 Identity = 50/129 (38.76%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 493 RDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 R+K +L+ + LGP +IK GQ+L+ R D++ +++ +EL +LQD VP F +A IE EL P+E++F + +A+AS+ QV+ ATL+ G+DV +KV RP +E I DL L A Sbjct: 45 RNKHKNKPGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWASELAMLQDKVPPFDGALARQAIEAELKAPIESLFDDFNEIPLASASISQVHTATLKSNGKDVVLKVLRPNVETKIQADLQLMSQTA 173
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_EDWI9 (Probable ubiquinone biosynthesis protein ubiB OS=Edwardsiella ictaluri (strain 93-146) GN=ubiB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.504e-19 Identity = 54/120 (45.00%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASF 885 +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F +A IE LG PLE F SQ +A+AS+ QV+ ATLRE G +V +KV RP I+PII D+ L LA + Sbjct: 56 RLRLALQTLGPVWIKFGQMLSTRRDLFAPAIADQLALLQDRVAPFDGALARRQIEASLGGPLEQWFDDFDSQALASASIAQVHTATLRENGREVVLKVIRPDIQPIIRADVRLMYRLAGW 175
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHEPA (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ubiB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.241e-18 Identity = 47/120 (39.17%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASF 885 +L+ + LGP +IK GQ+L+ R D++ +++ EL +LQD VP F + +A IE+EL P+E F+ +A+AS+ QV+ ATL+ G V +KV RP +E ++ DL L A F Sbjct: 56 RLKLAMQELGPVYIKFGQMLSTRRDLLSDEWAEELAMLQDRVPPFDSAIARESIEKELNAPIERYFNDFDDTPLASASISQVHTATLKSNGAAVVLKVLRPDVEKKVHADLLLMSQAADF 175
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_BURPP (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ubiB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.621e-18 Identity = 54/134 (40.30%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 487 VGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLR---ETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +GR + P +LR L +LGP F+K GQVL+ R D++ D +EL LQD VP F + VA ++E LG P++ +F +A+AS+ QV+ AT++ G+ VA+KV RP + P+I DL L R +A Sbjct: 40 IGRKFDAPP--GVRLRLALESLGPIFVKFGQVLSTRRDLLPVDIADELAKLQDQVPPFESAVAIRLVENALGAPVDVLFDDFERVPVASASIAQVHFATVKAGQHAGKAVAVKVLRPNMLPVIDSDLALLRDIA 171
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_XYLFM (Probable ubiquinone biosynthesis protein ubiB OS=Xylella fastidiosa (strain M12) GN=ubiB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18 Identity = 55/126 (43.65%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 505 VVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 V R R+LR L LGP F+K GQ+L+ R D+V +D +EL +LQD V F Q A IIE LG+ +E+ F+ + +A+AS+ QV+ ATL + E V +KV RP IE I D+ L ++LA+ Sbjct: 47 VEQSRGRRLRLALQELGPIFVKFGQILSTRRDLVPQDIGDELVMLQDRVEPFEGQTARIIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDRRE-VVVKVLRPDIEHQISDDIALLKSLAT 171 The following BLAST results are available for this feature:
BLAST of CK934830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934830 ID=CK934830; Name=CK934830; organism=Citrus sinensis; type=EST; length=885bpback to top |