CK934830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHEPW (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=ubiB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.117e-18 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASF 885 +L+ + LGP +IK GQ+L+ R D++ +++ EL +LQD VP F + +A IE+EL P+E F +A+AS+ QV+ ATL+ G V +KV RP +E ++ D+ L A+F Sbjct: 56 RLKLAMQELGPVYIKFGQMLSTRRDLLSDEWAEELAMLQDRVPPFDSAIARESIEQELNAPIETYFDDFEDTPLASASISQVHTATLKSNGAKVVLKVLRPDVEQKVHADIQLMSQAANF 175
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: Y095_SYNY3 (Uncharacterized protein sll0095 OS=Synechocystis sp. (strain PCC 6803) GN=sll0095 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.765e-18 Identity = 51/116 (43.97%), Postives = 73/116 (62.93%), Query Frame = 1 Query: 517 RARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFL 864 RA+ L L LGP+FIK GQ L+ R DI+ +Y+ LQD VP F ++ A +IE+EL ++ +F + +A+ASLGQV+RA L TGE V +KVQRPG++ ++ D L Sbjct: 57 RAQWLVQQLLYLGPTFIKIGQSLSTRADIIPAEYIEAFTQLQDRVPPFDSRQAIAVIEQELHGAIDEIFQQFEVTPLASASLGQVHRAVL-PTGEAVVVKVQRPGLDSLLNLDFEL 171
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_XYLFT (Probable ubiquinone biosynthesis protein ubiB OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.765e-18 Identity = 54/126 (42.86%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 505 VVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 V R R+LR L LGP F+K GQ+L+ R D+V +D +EL +LQD V F Q A +IIE LG+ +E+ F+ + +A+AS+ QV+ ATL + V +KV RP IE I D+ L ++LA+ Sbjct: 47 VEQSRGRRLRLALQELGPIFVKFGQILSTRRDLVPQDIGDELVMLQDRVEPFEGQTARSIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDR-RAVVVKVLRPDIEHQISDDIALLKSLAT 171
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_XYLF2 (Probable ubiquinone biosynthesis protein ubiB OS=Xylella fastidiosa (strain M23) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.765e-18 Identity = 54/126 (42.86%), Postives = 78/126 (61.90%), Query Frame = 1 Query: 505 VVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 V R R+LR L LGP F+K GQ+L+ R D+V +D +EL +LQD V F Q A +IIE LG+ +E+ F+ + +A+AS+ QV+ ATL + V +KV RP IE I D+ L ++LA+ Sbjct: 47 VEQSRGRRLRLALQELGPIFVKFGQILSTRRDLVPQDIGDELVMLQDRVEPFEGQTARSIIETALGKSVESAFAHFDTVPLASASISQVHAATLHDR-RAVVVKVLRPDIEHQISDDIALLKSLAT 171
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHEFN (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella frigidimarina (strain NCIMB 400) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.765e-18 Identity = 49/130 (37.69%), Postives = 77/130 (59.23%), Query Frame = 1 Query: 493 RDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 R+K A +L+ + +LGP +IK GQ+L+ R D++ +++ +L +LQD VP F + +A IE ELG P+ F + +A+AS+ QV+ ATL+ G+ V +KV RP +E I DL L A+ Sbjct: 45 RNKHKTKSPAERLKLAMQDLGPVYIKLGQMLSTRRDLLDDEWAYQLAMLQDRVPPFDSALAREAIEAELGAPIATYFDDFNDTPLASASISQVHTATLKSNGKAVVLKVLRPNVEQQILADLQLMTQTAN 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHEWM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18 Identity = 46/120 (38.33%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASF 885 +L+ ++ LGP +IK GQ+L+ R D++ +++ EL +LQD VP F + +A +IE ELG ++ F + +A+AS+ QV+ ATL+ G+ V +KV RP +E + DL L A+F Sbjct: 56 RLKLVMQELGPVYIKFGQMLSTRRDLLDDEWAEELAMLQDRVPPFDSSIAREMIELELGTSIDTYFDDFDNTPLASASISQVHTATLKSNGKAVVLKVLRPNVEAQVDADLHLMSQAANF 175
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHEHH (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella halifaxensis (strain HAW-EB4) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.717e-18 Identity = 46/120 (38.33%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASF 885 +L+ + LGP +IK GQ+L+ R D++ +++ EL +LQD VP F + +A IE EL P+E+ F+ +A+AS+ QV+ ATL+ G V +K+ RP +E ++ DL L A F Sbjct: 56 RLKLAMQELGPVYIKFGQMLSTRRDLLSDEWAEELAMLQDRVPPFDSAIARASIETELNAPIESYFNDFDDIPLASASISQVHTATLKSNGAAVVLKILRPDVEQKVHADLLLMSQAADF 175
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHEAM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=ubiB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.045e-18 Identity = 46/120 (38.33%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLASF 885 +L+ + LGP +IK GQ+L+ R D++ +++ EL +LQD VP+F + +A IE EL P++++F +A+AS+ QV+ ATL+ G+ V +KV RP +E I DL L +A++ Sbjct: 56 RLKLAMQELGPVYIKFGQMLSTRRDLLSDEWAQELSMLQDRVPAFDSALAREAIEAELKAPIDSLFDDFDDTPLASASISQVHTATLKSNGQQVVLKVLRPNVEANIKADLELMLQVATW 175
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_DELAS (Probable ubiquinone biosynthesis protein ubiB OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=ubiB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.045e-18 Identity = 49/124 (39.52%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 517 RARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETG---EDVAIKVQRPGIEPIIYRDLFLFRTLA 879 R ++LR L LGP F+K GQVL+ R D++ D EL LQD VP F +Q+A + IE + L+ +F + +A+AS+ QV+ A + + DVA+KV RPG++ +I +DL L +A Sbjct: 49 RGQRLREALEELGPIFVKFGQVLSTRSDLMPPDVAEELARLQDRVPPFDSQIAVDTIERAFRKKLDQIFVSFEREPVASASIAQVHFAVISDRNGVQRDVAVKVLRPGMKTVIDKDLALMHMMA 172
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SHEON (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella oneidensis GN=ubiB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.051e-17 Identity = 49/129 (37.98%), Postives = 73/129 (56.59%), Query Frame = 1 Query: 493 RDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 R+K +L+ + LGP +IK GQ+L+ R D++ +++ EL +LQD VP F +A IE EL P+E F + +A+AS+ QV+ ATL+ G+ V +KV RP +E I DL L A Sbjct: 45 RNKHKDKSGGERLKLAMQELGPVYIKLGQMLSTRRDLLSDEWATELAMLQDKVPPFDGALARLAIEAELKAPIETFFDDFNETPLASASISQVHTATLKSNGKAVVLKVLRPNVETKIQADLLLMSQTA 173 The following BLAST results are available for this feature:
BLAST of CK934830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934830 ID=CK934830; Name=CK934830; organism=Citrus sinensis; type=EST; length=885bpback to top |