CK934830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SALPK (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella paratyphi A (strain AKU_12601) GN=ubiB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.162e-16 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IEE +G P+EA F Q +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SALPC (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella paratyphi C (strain RKS4594) GN=ubiB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.162e-16 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IEE +G P+EA F Q +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SALPB (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=ubiB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.162e-16 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IEE +G P+EA F Q +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SALPA (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella paratyphi A GN=ubiB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.162e-16 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IEE +G P+EA F Q +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SALNS (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella newport (strain SL254) GN=ubiB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.162e-16 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IEE +G P+EA F Q +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SALHS (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella heidelberg (strain SL476) GN=ubiB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.162e-16 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IEE +G P+EA F Q +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SALDC (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella dublin (strain CT_02021853) GN=ubiB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.162e-16 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IEE +G P+EA F Q +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SALCH (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella choleraesuis GN=ubiB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.162e-16 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IEE +G P+EA F Q +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_SALA4 (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella agona (strain SL483) GN=ubiB PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.162e-16 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 1 Query: 439 VWSLGLYWS-NLTYDCLVGRDKEVVPDRARQLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGR-PLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLA 879 +W L+W N D L+G +LR L LGP +IK GQ+L+ R D+ ++L +LQD V F ++A IEE +G P+EA F Q +A+AS+ QV+ A L+ G++V IKV RP I P+I DL L LA Sbjct: 36 LWRYSLFWMPNRHKDKLLGE----------RLRLALQELGPVWIKFGQMLSTRRDLFPPQIADQLALLQDKVAPFDGRLAKAQIEEAMGGLPVEAWFDDFDIQPLASASIAQVHTARLKSNGKEVVIKVIRPDILPVIQADLKLIYRLA 174
BLAST of CK934830 vs. ExPASy Swiss-Prot
Match: UBIB_VIBVY (Probable ubiquinone biosynthesis protein ubiB OS=Vibrio vulnificus (strain YJ016) GN=ubiB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.517e-16 Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 1 Query: 526 QLRNLLCNLGPSFIKAGQVLANRPDIVREDYMNELCILQDDVPSFPNQVAFNIIEEELGRPLEAVFSKISSQTIAAASLGQVYRATLRETGEDVAIKVQRPGIEPIIYRDLFLFRTLAS 882 +LR L LGP +IK GQ+L+ R D+ + L +LQD V F +A +E+ LG PLE FS +A+AS+ QV+ A L+ T ++V +KV RP I PII DL L R +AS Sbjct: 56 RLRLALQELGPVWIKFGQMLSTRRDLFPPHIADPLALLQDQVSPFDGALAKAQMEQALGGPLETWFSDFDLVPLASASIAQVHTAKLKTTNQEVVLKVIRPDIRPIIDADLKLMRRMAS 174 The following BLAST results are available for this feature:
BLAST of CK934830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934830 ID=CK934830; Name=CK934830; organism=Citrus sinensis; type=EST; length=885bpback to top |