CK934890 | Citrus Genome Database

Overview


Name	CK934890
Unique Name	CK934890
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	751

Libraries


Library Name	Type
Developing fruit peel at 38 DAFB	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CK934890 vs. ExPASy Swiss-Prot
Match: UBIQ_RABIT (Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  137 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 364
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 122.094 bits (305), Expect = 9.214e-30
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 1

Query:  385 LDWEDFTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 591
            L  +  TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    8 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 28.1054 bits (61), Expect = 9.214e-30
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  365 MQIFVKTLTGKTL 403
            MQIFVKTLTGKT+
Sbjct:    1 MQIFVKTLTGKTI 13

HSP 4 Score: 81.2629 bits (199), Expect = 6.379e-15
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 2

Query:    5 KEGILSDQQRLTFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 136
            KEGI  DQQRL FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CK934890 vs. ExPASy Swiss-Prot
Match: UBIQ_PONPY (Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  137 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 364
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 122.094 bits (305), Expect = 9.214e-30
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 1

Query:  385 LDWEDFTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 591
            L  +  TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    8 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 28.1054 bits (61), Expect = 9.214e-30
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  365 MQIFVKTLTGKTL 403
            MQIFVKTLTGKT+
Sbjct:    1 MQIFVKTLTGKTI 13

HSP 4 Score: 81.2629 bits (199), Expect = 6.379e-15
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 2

Query:    5 KEGILSDQQRLTFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 136
            KEGI  DQQRL FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CK934890 vs. ExPASy Swiss-Prot
Match: UBIQ_PLUXY (Ubiquitin OS=Plutella xylostella PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  137 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 364
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 122.094 bits (305), Expect = 9.214e-30
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 1

Query:  385 LDWEDFTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 591
            L  +  TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    8 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 28.1054 bits (61), Expect = 9.214e-30
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  365 MQIFVKTLTGKTL 403
            MQIFVKTLTGKT+
Sbjct:    1 MQIFVKTLTGKTI 13

HSP 4 Score: 81.2629 bits (199), Expect = 6.379e-15
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 2

Query:    5 KEGILSDQQRLTFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 136
            KEGI  DQQRL FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CK934890 vs. ExPASy Swiss-Prot
Match: UBIQ_PIG (Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  137 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 364
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 122.094 bits (305), Expect = 9.214e-30
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 1

Query:  385 LDWEDFTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 591
            L  +  TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    8 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 28.1054 bits (61), Expect = 9.214e-30
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  365 MQIFVKTLTGKTL 403
            MQIFVKTLTGKT+
Sbjct:    1 MQIFVKTLTGKTI 13

HSP 4 Score: 81.2629 bits (199), Expect = 6.379e-15
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 2

Query:    5 KEGILSDQQRLTFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 136
            KEGI  DQQRL FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CK934890 vs. ExPASy Swiss-Prot
Match: UBIQ_PANTR (Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  137 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 364
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 122.094 bits (305), Expect = 9.214e-30
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 1

Query:  385 LDWEDFTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 591
            L  +  TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    8 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 28.1054 bits (61), Expect = 9.214e-30
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  365 MQIFVKTLTGKTL 403
            MQIFVKTLTGKT+
Sbjct:    1 MQIFVKTLTGKTI 13

HSP 4 Score: 81.2629 bits (199), Expect = 6.379e-15
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 2

Query:    5 KEGILSDQQRLTFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 136
            KEGI  DQQRL FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CK934890 vs. ExPASy Swiss-Prot
Match: UBIQ_OPHHA (Ubiquitin OS=Ophiophagus hannah PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  137 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 364
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 122.094 bits (305), Expect = 9.214e-30
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 1

Query:  385 LDWEDFTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 591
            L  +  TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    8 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 28.1054 bits (61), Expect = 9.214e-30
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  365 MQIFVKTLTGKTL 403
            MQIFVKTLTGKT+
Sbjct:    1 MQIFVKTLTGKTI 13

HSP 4 Score: 81.2629 bits (199), Expect = 6.379e-15
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 2

Query:    5 KEGILSDQQRLTFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 136
            KEGI  DQQRL FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CK934890 vs. ExPASy Swiss-Prot
Match: UBIQ_MOUSE (Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  137 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 364
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 122.094 bits (305), Expect = 9.214e-30
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 1

Query:  385 LDWEDFTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 591
            L  +  TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    8 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 28.1054 bits (61), Expect = 9.214e-30
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  365 MQIFVKTLTGKTL 403
            MQIFVKTLTGKT+
Sbjct:    1 MQIFVKTLTGKTI 13

HSP 4 Score: 81.2629 bits (199), Expect = 6.379e-15
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 2

Query:    5 KEGILSDQQRLTFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 136
            KEGI  DQQRL FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CK934890 vs. ExPASy Swiss-Prot
Match: UBIQ_MANSE (Ubiquitin OS=Manduca sexta PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  137 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 364
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 122.094 bits (305), Expect = 9.214e-30
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 1

Query:  385 LDWEDFTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 591
            L  +  TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    8 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 28.1054 bits (61), Expect = 9.214e-30
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  365 MQIFVKTLTGKTL 403
            MQIFVKTLTGKT+
Sbjct:    1 MQIFVKTLTGKTI 13

HSP 4 Score: 81.2629 bits (199), Expect = 6.379e-15
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 2

Query:    5 KEGILSDQQRLTFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 136
            KEGI  DQQRL FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CK934890 vs. ExPASy Swiss-Prot
Match: UBIQ_MACFA (Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  137 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 364
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 122.094 bits (305), Expect = 9.214e-30
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 1

Query:  385 LDWEDFTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 591
            L  +  TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    8 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 28.1054 bits (61), Expect = 9.214e-30
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  365 MQIFVKTLTGKTL 403
            MQIFVKTLTGKT+
Sbjct:    1 MQIFVKTLTGKTI 13

HSP 4 Score: 81.2629 bits (199), Expect = 6.379e-15
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 2

Query:    5 KEGILSDQQRLTFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 136
            KEGI  DQQRL FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of CK934890 vs. ExPASy Swiss-Prot
Match: UBIQ_ICTPU (Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 2

Query:  137 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 364
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 122.094 bits (305), Expect = 9.214e-30
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 1

Query:  385 LDWEDFTLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 591
            L  +  TLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    8 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 28.1054 bits (61), Expect = 9.214e-30
Identity = 12/13 (92.31%), Postives = 13/13 (100.00%), Query Frame = 2

Query:  365 MQIFVKTLTGKTL 403
            MQIFVKTLTGKT+
Sbjct:    1 MQIFVKTLTGKTI 13

HSP 4 Score: 81.2629 bits (199), Expect = 6.379e-15
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 2

Query:    5 KEGILSDQQRLTFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 136
            KEGI  DQQRL FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   33 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of CK934890 vs. ExPASy Swiss-Prot

BLAST of CK934890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93


Match Name	E-value	Identity	Description
UBIQ_RABIT	2.109e-34	96.05	Ubiquitin OS=Oryctolagus cuniculus PE=1 SV=1	[more]
UBIQ_PONPY	2.109e-34	96.05	Ubiquitin OS=Pongo pygmaeus GN=UBA52 PE=3 SV=2	[more]
UBIQ_PLUXY	2.109e-34	96.05	Ubiquitin OS=Plutella xylostella PE=3 SV=1	[more]
UBIQ_PIG	2.109e-34	96.05	Ubiquitin OS=Sus scrofa GN=UBA52 PE=3 SV=1	[more]
UBIQ_PANTR	2.109e-34	96.05	Ubiquitin OS=Pan troglodytes GN=UBB PE=1 SV=2	[more]
UBIQ_OPHHA	2.109e-34	96.05	Ubiquitin OS=Ophiophagus hannah PE=3 SV=1	[more]
UBIQ_MOUSE	2.109e-34	96.05	Ubiquitin OS=Mus musculus GN=Rps27a PE=1 SV=1	[more]
UBIQ_MANSE	2.109e-34	96.05	Ubiquitin OS=Manduca sexta PE=3 SV=1	[more]
UBIQ_MACFA	2.109e-34	96.05	Ubiquitin OS=Macaca fascicularis GN=UBA52 PE=3 SV=...	[more]
UBIQ_ICTPU	2.109e-34	96.05	Ubiquitin OS=Ictalurus punctatus GN=rps27a PE=3 SV...	[more]

Pages

Properties


Property Name	Value
Genbank description	CGF1004225_E12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IVF_E12 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CK934890 ID=CK934890; Name=CK934890; organism=Citrus sinensis; type=EST; length=751bp
GGGGAAAGAGGGGATCCTTTCGGACCAGCAAAGATTGACCTTCGCCGGTA
AGCAGTTGGAAGATGGCCGCACCTTGGCCGATTACAACATTCAGAAAGAG
TCAACTCTCCACCTTGTTCTTCGTCTCAGGGGAGGCATGCAGATATTTGT
TAAGACCCTTACTGGGAAAACAATTACTTTGGAAGTTGAGAGCTCAGACA
CAATTGACAATGTCAAGGCAAAAATCCAAGACAAGGAAGGAATTCCACCG
GATCAGCAGCGTTTGATCTTCGCTGGCAAACAGCTTGAGGATGGAAGGAC
TCTTGCGGATTATAACATCCAGAAGGAGTCGACCCTTCATCTGGTTCTGC
GCCTGAGGGGTGGTATGCAGATATTTGTCAAGACCTTGACTGGGAAGACT
TTACTCTGGAGGTGGAGAGCTCAGATACTATTGATAATGTTAAGGCAAAG
ATTCAGGACAAGGAAGGGATTCCACCAGATCAGCAGAGGCTCATCTTTGC
TGGGAAGCAGCTTGAGGATGGCCGTACTTTAGCTGATTATAACATTCAGA
AGGAGTCCACCCTCCATCTTGTGCTCCGCCTTCGTGGTGGTGAATTCTAA
GAATGTTATCTGCTTGCCGCCGTGTCTGTTCTGCTCTGCTGTAGCAGTAA
TATTTATTTTTCATTTGCTAGTCCTGCTTCTGTTTCAGTCTTTTTGTCAC
ATCAAGTTTTATGTGGTAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
A