CK934902

Overview
NameCK934902
Unique NameCK934902
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length795
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934902 vs. ExPASy Swiss-Prot
Match: NDK_XYLFM (Nucleoside diphosphate kinase OS=Xylella fastidiosa (strain M12) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = 2
Query:  338 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSGPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 748
            +ERT   IKPD V + +I +I SRFE+ G K+VA K    S+  A+  Y   ++RPFFN L EF+ SGPV+  V E E  +   R+L+GAT+P+ + PGTIR D A  +  N  HGSD  E A  E+  +F   +++
Sbjct:    3 LERTLSIIKPDAVAKNVIGDIYSRFEKAGLKIVAAKYKQLSRREAEGFYAVHRDRPFFNALVEFMISGPVMIQVLESENAVARHRELLGATNPKDAAPGTIRADFAESIEANAAHGSDSVENAAIEVAYFFAATEII 139          
BLAST of CK934902 vs. ExPASy Swiss-Prot
Match: NDK_XYLF2 (Nucleoside diphosphate kinase OS=Xylella fastidiosa (strain M23) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25
Identity = 59/137 (43.07%), Postives = 83/137 (60.58%), Query Frame = 2
Query:  338 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSGPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 748
            +ERT   IKPD V + +I +I SRFE+ G K+VA K    S+  A+  Y   ++RPFFN L EF+ SGPV+  V E E  +   R+L+GAT+P+ + PGTIR D A  +  N  HGSD  E A  E+  +F   +++
Sbjct:    3 LERTLSIIKPDAVAKNVIGDIYSRFEKAGLKIVAAKYKQLSRREAEGFYAVHRDRPFFNALVEFMISGPVMIQVLESENAVARHRELLGATNPKDAAPGTIRADFAESIEANAAHGSDSVENAAIEVAYFFAATEII 139          
BLAST of CK934902 vs. ExPASy Swiss-Prot
Match: NDK_VIBCM (Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25
Identity = 58/136 (42.65%), Postives = 88/136 (64.71%), Query Frame = 2
Query:  338 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSGPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 745
            +ERTF  IKPD V+R LI EI  R E+ G +++A K+V  S+E A   Y + + +PFF  L EF++SGP++  V EGE  I   R+L+G T+P+++  GT+R D A+ +  N +HGSD P +A  EI+ +F   ++
Sbjct:    3 LERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTLRADYALSMRYNSVHGSDSPASAAREIEFFFPESEI 138          
BLAST of CK934902 vs. ExPASy Swiss-Prot
Match: NDK_VIBCH (Nucleoside diphosphate kinase OS=Vibrio cholerae GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25
Identity = 58/136 (42.65%), Postives = 88/136 (64.71%), Query Frame = 2
Query:  338 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSGPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 745
            +ERTF  IKPD V+R LI EI  R E+ G +++A K+V  S+E A   Y + + +PFF  L EF++SGP++  V EGE  I   R+L+G T+P+++  GT+R D A+ +  N +HGSD P +A  EI+ +F   ++
Sbjct:    3 LERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTLRADYALSMRYNSVHGSDSPASAAREIEFFFPESEI 138          
BLAST of CK934902 vs. ExPASy Swiss-Prot
Match: NDK_VIBC3 (Nucleoside diphosphate kinase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25
Identity = 58/136 (42.65%), Postives = 88/136 (64.71%), Query Frame = 2
Query:  338 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSGPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 745
            +ERTF  IKPD V+R LI EI  R E+ G +++A K+V  S+E A   Y + + +PFF  L EF++SGP++  V EGE  I   R+L+G T+P+++  GT+R D A+ +  N +HGSD P +A  EI+ +F   ++
Sbjct:    3 LERTFSIIKPDAVKRNLIGEIYHRIEKAGLQIIAAKMVHLSEEQASGFYAEHEGKPFFEPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTLRADYALSMRYNSVHGSDSPASAAREIEFFFPESEI 138          
BLAST of CK934902 vs. ExPASy Swiss-Prot
Match: NDK_NOCSJ (Nucleoside diphosphate kinase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25
Identity = 55/129 (42.64%), Postives = 84/129 (65.12%), Query Frame = 2
Query:  344 RTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSGPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWF 730
            RT + +KPD V+RGL+  I+SR+E KG  +VA++        A +HY +   + F+  L +F++ GP++A+V EG+  +   R L GATD  K+ PGTIRGD ++    N++HGSD PE+A+ EI +WF
Sbjct:    4 RTLVLLKPDAVRRGLVGAILSRYEAKGLTIVAMEQRTIDAAVADQHYAEHVAKEFYPPLRDFVTGGPLVALVLEGDNSVDVVRLLNGATDGSKAAPGTIRGDFSLSNRENLVHGSDSPESAEREIGIWF 132          
BLAST of CK934902 vs. ExPASy Swiss-Prot
Match: NDK_METSB (Nucleoside diphosphate kinase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25
Identity = 62/137 (45.26%), Postives = 82/137 (59.85%), Query Frame = 2
Query:  338 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSGPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 748
            +ERTF  IKPD  +R L   I +  E+ G +++A K V  ++  A+  Y   KERPFF  L + + SGPV+  V EGE  I   R ++GATDP K+ PGTIR + A+ VG N  HGSD  ETA  EI  WF   ++V
Sbjct:    3 IERTFSIIKPDATRRNLTGAINALIEKAGLRIIAQKRVQITRPQAETFYAVHKERPFFGALVDTMISGPVVVQVLEGENAIKAYRDVLGATDPAKAAPGTIRKEFALSVGENSGHGSDASETAAIEIAQWFSGNEIV 139          
BLAST of CK934902 vs. ExPASy Swiss-Prot
Match: NDK_LEGPH (Nucleoside diphosphate kinase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=ndk PE=3 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25
Identity = 58/137 (42.34%), Postives = 84/137 (61.31%), Query Frame = 2
Query:  341 ERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSGPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLVN 751
            E T   IKPD V + +I EI +RFE+ G  +VA K+   S+E A+  Y   + RPFF  L +F+ SGPV+  V +GE  +   R+++GAT+P+++ PGTIR D A  +  N +HGSD  E A  EI  +F+  +L N
Sbjct:    4 ELTLSIIKPDAVAKSVIGEIYTRFEKAGLDIVAAKMTQLSREQAESFYDIHRARPFFKDLVDFMISGPVMIQVLKGENAVAKNREIMGATNPKEAAPGTIRADFADSIDANAVHGSDSLENAAREIAFFFEQHELCN 140          
BLAST of CK934902 vs. ExPASy Swiss-Prot
Match: NDK_BARHE (Nucleoside diphosphate kinase OS=Bartonella henselae GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25
Identity = 62/137 (45.26%), Postives = 82/137 (59.85%), Query Frame = 2
Query:  338 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSGPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDLV 748
            +ERTF  IKPD  +R L   I    E  G +++A K V  S+  A+K Y   KER FF+ L E +SSGP I  V EGE  I   R+++GAT+P+ +  GTIR   A+ +G N +HGSD  ETAK EI  WF   ++V
Sbjct:    3 VERTFSMIKPDATRRNLTGAITKMLEDAGLRVIASKRVWMSQREAEKFYAVHKERAFFSELVELMSSGPTIVQVLEGENAIAKNREVMGATNPEDAQEGTIRKVHALSIGENSVHGSDSAETAKTEIAFWFSEVEIV 139          
BLAST of CK934902 vs. ExPASy Swiss-Prot
Match: NDK_ALISL (Nucleoside diphosphate kinase OS=Aliivibrio salmonicida (strain LFI1238) GN=ndk PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.495e-25
Identity = 58/136 (42.65%), Postives = 90/136 (66.18%), Query Frame = 2
Query:  338 MERTFIAIKPDGVQRGLISEIISRFERKGFKLVAIKIVVPSKEFAQKHYHDLKERPFFNGLCEFLSSGPVIAMVWEGEGVITYGRKLIGATDPQKSGPGTIRGDLAVVVGRNIIHGSDGPETAKDEIKLWFKPEDL 745
            +ERTF  +KPD V+R LI  I  R E+ G ++VA K++  +KE AQ  Y + + + FF+ L E+++SGPV+  V EGE VIT  R+L+G T+P ++  G++R D A+ +  N +HGSD PE+A  EI  +F  +++
Sbjct:    3 IERTFSIVKPDAVKRNLIGAIYRRIEKTGMQVVAAKMLSLTKEQAQGFYAEHEGKEFFDALVEYMTSGPVMVQVLEGESVITRYRELMGKTNPDEAACGSLRSDYAISMRYNSVHGSDSPESAAREIAYFFVEDEI 138          
The following BLAST results are available for this feature:
BLAST of CK934902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_XYLFM1.495e-2543.07Nucleoside diphosphate kinase OS=Xylella fastidios... [more]
NDK_XYLF21.495e-2543.07Nucleoside diphosphate kinase OS=Xylella fastidios... [more]
NDK_VIBCM1.495e-2542.65Nucleoside diphosphate kinase OS=Vibrio cholerae s... [more]
NDK_VIBCH1.495e-2542.65Nucleoside diphosphate kinase OS=Vibrio cholerae G... [more]
NDK_VIBC31.495e-2542.65Nucleoside diphosphate kinase OS=Vibrio cholerae s... [more]
NDK_NOCSJ1.495e-2542.64Nucleoside diphosphate kinase OS=Nocardioides sp. ... [more]
NDK_METSB1.495e-2545.26Nucleoside diphosphate kinase OS=Methylocella silv... [more]
NDK_LEGPH1.495e-2542.34Nucleoside diphosphate kinase OS=Legionella pneumo... [more]
NDK_BARHE1.495e-2545.26Nucleoside diphosphate kinase OS=Bartonella hensel... [more]
NDK_ALISL1.495e-2542.65Nucleoside diphosphate kinase OS=Aliivibrio salmon... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004225_C10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IVF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934902 ID=CK934902; Name=CK934902; organism=Citrus sinensis; type=EST; length=795bp
GGGGATCACTCTGTTGGGTTTACTTACTCTCTTGTTTCAGCTTAAATTTG
AGTCTTGAGAATCCAATCCAATCCCAAGTATGAGCTCTCAGATAGTTAGA
TCTGCTTCTAGAACCGCAAGGTCTCTGCTTTCAGCTTCCAAGAATTCGCG
CTTTTACTCCGAAGGGCGAGCTGTATCTGCTGCAGCGGCAGTTACATTCA
GTGGGAAGTTGCCTTATCTTGTTTCAAGTTTTGGGAGGGCTGGTTCCTCA
ACTGCATCTCGATCATGGCTCTCGGGAGCCATTGCAATTCCTGCTGCAGC
TTACACGCTCCAGGAGCAGGAAGTACATGCTGCAGAGATGGAACGCACTT
TCATTGCCATCAAGCCAGATGGGGTGCAAAGAGGACTGATTTCAGAAATC
ATCTCTCGCTTTGAGCGCAAAGGCTTTAAGCTTGTGGCCATTAAGATAGT
AGTTCCATCAAAAGAGTTTGCACAAAAACATTATCATGATCTGAAGGAAA
GACCCTTCTTTAATGGCCTGTGCGAGTTCCTTAGCTCTGGTCCAGTCATT
GCCATGGTATGGGAAGGAGAGGGAGTTATTACGTATGGTCGCAAACTCAT
TGGAGCCACAGATCCTCAGAAATCAGGACCTGGAACAATCAGAGGCGATC
TAGCTGTTGTTGTTGGAAGAAACATCATTCATGGAAGTGATGGCCCCGAG
ACCGCCAAGGATGAGATTAAATTGTGGTTCAAACCCGAAGACTTGGTTAA
TTACACAAGCAATGCAGAGAAGTGGGTCTATGAATCCAAGTGATT
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