CK934922

Overview
NameCK934922
Unique NameCK934922
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934922 vs. ExPASy Swiss-Prot
Match: PP1B_HUMAN (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Homo sapiens GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 182.185 bits (461), Expect = 3.150e-45
Identity = 83/183 (45.36%), Postives = 121/183 (66.12%), Query Frame = 3
Query:    3 VRGNHESRQITQVYGFYDECLRKYGNANVWKHFADLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 548
            +RGNHE   I ++YGFYDEC R++ N  +WK F D F+ LP+ A+++ ++FC HGGLSP L +++ IR + R  +VP  G +CDLLWSDPD D  GWG + RG  +TFG D+ S+F + + L LI RAHQ+V DGY +   + +VT+FSAPNYC    N   ++ + E +  +F    P+ ++
Sbjct:  120 LRGNHECASINRIYGFYDECKRRF-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 301          
BLAST of CK934922 vs. ExPASy Swiss-Prot
Match: PP1B_CHICK (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Gallus gallus GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 182.185 bits (461), Expect = 3.150e-45
Identity = 83/183 (45.36%), Postives = 121/183 (66.12%), Query Frame = 3
Query:    3 VRGNHESRQITQVYGFYDECLRKYGNANVWKHFADLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 548
            +RGNHE   I ++YGFYDEC R++ N  +WK F D F+ LP+ A+++ ++FC HGGLSP L +++ IR + R  +VP  G +CDLLWSDPD D  GWG + RG  +TFG D+ S+F + + L LI RAHQ+V DGY +   + +VT+FSAPNYC    N   ++ + E +  +F    P+ ++
Sbjct:  120 LRGNHECASINRIYGFYDECKRRF-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 301          
BLAST of CK934922 vs. ExPASy Swiss-Prot
Match: PP1B_BOVIN (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Bos taurus GN=PPP1CB PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.150e-45
Identity = 83/183 (45.36%), Postives = 121/183 (66.12%), Query Frame = 3
Query:    3 VRGNHESRQITQVYGFYDECLRKYGNANVWKHFADLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 548
            +RGNHE   I ++YGFYDEC R++ N  +WK F D F+ LP+ A+++ ++FC HGGLSP L +++ IR + R  +VP  G +CDLLWSDPD D  GWG + RG  +TFG D+ S+F + + L LI RAHQ+V DGY +   + +VT+FSAPNYC    N   ++ + E +  +F    P+ ++
Sbjct:  120 LRGNHECASINRIYGFYDECKRRF-NIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKK 301          
BLAST of CK934922 vs. ExPASy Swiss-Prot
Match: PP12_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Nicotiana tabacum GN=NPP2 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.150e-45
Identity = 84/183 (45.90%), Postives = 118/183 (64.48%), Query Frame = 3
Query:    3 VRGNHESRQITQVYGFYDECLRKYGNANVWKHFADLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-GWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 548
            +RGNHE   I ++YGFYDEC R++ N  +WK   D F+ LP+ ALI+ ++ C+HGGLSP L  LD IR L R  ++P  G +CDLLWSDP     GWG++ RG  YTFG D  ++F   + + L+ RAHQ+V DGY +  ++ +VT+FSAPNYC    N  A++ + EN+  +F    P  R+
Sbjct:  125 LRGNHECASINRIYGFYDECKRRF-NVRLWKTNTDCFNCLPVAALIDDKILCMHGGLSPDLTDLDEIRNLPRPTDIPDSGLLCDLLWSDPSREVKGWGMNDRGVSYTFGSDKVAEFLMQHDMDLVCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPTDRK 306          
BLAST of CK934922 vs. ExPASy Swiss-Prot
Match: PP15_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 5 OS=Arabidopsis thaliana GN=TOPP5 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.114e-45
Identity = 83/183 (45.36%), Postives = 121/183 (66.12%), Query Frame = 3
Query:    3 VRGNHESRQITQVYGFYDECLRKYGNANVWKHFADLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 548
            +RGNHE   I ++YGFYDEC R++ N  +WK F D F+ LP+ A+I+ ++ C+HGGLSP L  ++ I+ ++R  +VP  G +CDLLWSDP  D  GWG++ RG  YTFG D  ++F   N + L+ RAHQ+V DGY +  D+ +VT+FSAPNYC    N  A++ + E++  +F    P  R+
Sbjct:  127 LRGNHECASINRIYGFYDECKRRF-NVKLWKVFTDTFNCLPVAAVIDEKILCMHGGLSPELINVEQIKNIERPTDVPDAGLLCDLLWSDPSKDVKGWGMNDRGVSYTFGADKVAEFLIKNDMDLVCRAHQVVEDGYEFFADRQLVTMFSAPNYCGEFDNAGALMSVDESLMCSFQILKPVDRR 308          
BLAST of CK934922 vs. ExPASy Swiss-Prot
Match: PP12_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.114e-45
Identity = 84/183 (45.90%), Postives = 121/183 (66.12%), Query Frame = 3
Query:    3 VRGNHESRQITQVYGFYDECLRKYGNANVWKHFADLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 548
            +RGNHE   I ++YGFYDEC R++ +  +WK F D F+ LP+ A+I+ ++ C+HGGLSP L  ++ I+ + R  +VP  G +CDLLWSDP  D  GWG++ RG  YTFG D  ++F   N + LI RAHQ+V DGY +  D+ +VT+FSAPNYC    N  A++ + E++  +F    PA R+
Sbjct:  127 LRGNHECASINRIYGFYDECKRRF-SVRLWKVFTDSFNCLPVAAVIDDKILCMHGGLSPDLTNVEQIKNIKRPTDVPDSGLLCDLLWSDPSKDVKGWGMNDRGVSYTFGPDKVAEFLIKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPADRK 308          
BLAST of CK934922 vs. ExPASy Swiss-Prot
Match: PP1_PHAVU (Serine/threonine-protein phosphatase PP1 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.373e-45
Identity = 84/182 (46.15%), Postives = 119/182 (65.38%), Query Frame = 3
Query:    3 VRGNHESRQITQVYGFYDECLRKYGNANVWKHFADLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-GWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPR 545
            +RGNHE  +I ++YGFYDEC R++ N  +WK F D F+ LP++ALI+ ++ C+HGGLSP L++LD I+ + R  E+P  G +CDLLWSDPD    GW  S RG   TFG D+ ++F   N L L+ R HQ+V DGY +   + +VT+FSAPNY     N  A+L + +++  +F    PA R
Sbjct:  115 LRGNHEEAKINRIYGFYDECKRRF-NVRLWKIFTDCFNCLPVSALIDDKILCMHGGLSPELESLDQIKEIQRPTEIPDSGLLCDLLWSDPDSSIEGWAESDRGVSCTFGPDVVAEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDDSLVCSFEILKPADR 295          
BLAST of CK934922 vs. ExPASy Swiss-Prot
Match: PP11_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Nicotiana tabacum GN=NPP1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.373e-45
Identity = 84/183 (45.90%), Postives = 119/183 (65.03%), Query Frame = 3
Query:    3 VRGNHESRQITQVYGFYDECLRKYGNANVWKHFADLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRC-GWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 548
            +RGNHE   I ++YGFYDEC R++ N  +WK F + F+ LP+ ALI+ ++ C+HGGLSP L  LD IR L R  +VP  G +CDLLWSDP     GWG++ RG  YTFG D  ++F   + + L+ RAHQ+V DGY +  ++ +VT+FSAPNYC    N  A++ + E++  +F    P  R+
Sbjct:  132 LRGNHECASINRIYGFYDECKRRF-NVKLWKCFTECFNCLPVAALIDEKILCMHGGLSPVLTNLDQIRNLPRPTDVPDSGLLCDLLWSDPSREVKGWGMNDRGVSYTFGPDKVAEFLMQHDMDLVCRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPTDRK 313          
BLAST of CK934922 vs. ExPASy Swiss-Prot
Match: PP1B_DROME (Serine/threonine-protein phosphatase beta isoform OS=Drosophila melanogaster GN=flw PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.017e-45
Identity = 85/183 (46.45%), Postives = 120/183 (65.57%), Query Frame = 3
Query:    3 VRGNHESRQITQVYGFYDECLRKYGNANVWKHFADLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 548
            +RGNHE   I ++YGFYDEC R+Y N  +WK F D F+ LP+ A+I+ ++FC HGGLSP L  ++ IR L R  +VP  G +CDLLWSDPD D  GWG + RG  +TFG D+ S+F + + L LI RAHQ+V DGY +   + +VT+FSAPNYC    N   ++ + + +  +F    P+ ++
Sbjct:  120 LRGNHECASINRIYGFYDECKRRY-NVKLWKTFTDCFNCLPVAAIIDEKIFCCHGGLSPDLQGMEQIRRLMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGVDVVSKFLNRHELDLICRAHQVVEDGYEFFARRQLVTLFSAPNYCGEFDNAGGMMTVDDTLMCSFQILKPSEKK 301          
BLAST of CK934922 vs. ExPASy Swiss-Prot
Match: PP1_NEUCR (Serine/threonine-protein phosphatase PP1 OS=Neurospora crassa GN=ppp-1 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.197e-44
Identity = 83/183 (45.36%), Postives = 122/183 (66.67%), Query Frame = 3
Query:    3 VRGNHESRQITQVYGFYDECLRKYGNANVWKHFADLFDYLPLTALIESQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDIASQFNHTNGLTLISRAHQLVMDGYNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMEQNFLQFDPAPRQ 548
            +RGNHE   I ++YGFYDEC R+Y N  +WK F D F+ LP+ A+I+ ++F +HGGLSP L++++ IR + R  ++P  G +CDLLWSDPD D  GW  + RG  +TFG D+ S+F   + + LI RAHQ+V DGY +   + +VT+FSAPNYC    N  A++ + E++  +F    PA ++
Sbjct:  121 LRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMEQIRRVMRPTDIPDCGLLCDLLWSDPDKDITGWSENDRGVSFTFGPDVVSRFLQKHDMDLICRAHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGAMMSVDESLLCSFQILKPAEKK 302          
The following BLAST results are available for this feature:
BLAST of CK934922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 192
Match NameE-valueIdentityDescription
PP1B_HUMAN3.150e-4545.36Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_CHICK3.150e-4545.36Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_BOVIN3.150e-4545.36Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP12_TOBAC3.150e-4545.90Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP15_ARATH4.114e-4545.36Serine/threonine-protein phosphatase PP1 isozyme 5... [more]
PP12_ARATH4.114e-4545.90Serine/threonine-protein phosphatase PP1 isozyme 2... [more]
PP1_PHAVU5.373e-4546.15Serine/threonine-protein phosphatase PP1 OS=Phaseo... [more]
PP11_TOBAC5.373e-4545.90Serine/threonine-protein phosphatase PP1 isozyme 1... [more]
PP1B_DROME7.017e-4546.45Serine/threonine-protein phosphatase beta isoform ... [more]
PP1_NEUCR1.197e-4445.36Serine/threonine-protein phosphatase PP1 OS=Neuros... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004225_B05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IVF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934922 ID=CK934922; Name=CK934922; organism=Citrus sinensis; type=EST; length=834bp
GGGTGAGGGGAAATCATGAGAGTCGTCAGATAACTCAAGTGTATGGATTT
TATGATGAATGTTTGAGAAAATATGGAAATGCTAATGTCTGGAAGCATTT
CGCTGACCTTTTTGATTATCTGCCACTTACAGCTCTAATTGAGAGTCAGG
TTTTCTGCTTGCACGGAGGACTTTCCCCATCTTTGGATACATTAGATAAT
ATACGTGCTCTGGACCGTATACAGGAGGTTCCTCATGAGGGCCCGATGTG
TGATCTCTTATGGTCTGATCCCGACGATCGATGTGGATGGGGAATATCTC
CTCGGGGTGCTGGGTACACATTTGGGCAGGATATAGCTTCACAGTTCAAC
CATACTAATGGGCTGACTCTTATTTCTAGAGCTCACCAGCTCGTAATGGA
CGGATACAATTGGTGCCAAGACAAGAATGTGGTGACAGTGTTCAGTGCAC
CAAATTACTGCTACCGGTGTGGAAATATGGCTGCAATTCTTGAGATTGGG
GAGAATATGGAGCAGAATTTTCTTCAATTTGACCCGGCGCCTCGTCAAAT
TGAGCCTGACACCACACGCAGGACTCCCGACTATTTTTTGTGATTGCCAT
GGATTCCACTGGTGAATTTTGTTCTTTAATGTTGTGTTTTTGTAGATGTC
TCTTACAAAAACTGAGTTATTGTTTTTAGTCAAAGGAGAGACAAGACGAA
GCCATTGTTCTTGTCATTCTTTTGATCGAAGTTTTTATGATGCTGGGTTC
ATGTGAGTTTATAGGTCCGATCTGTAGTAGCTTCTTTTGTATTCTAAAAT
GGGAAGAAAAATGGAATGTCATGCTGTGTTGACG
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