CK934928

Overview
NameCK934928
Unique NameCK934928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934928 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 6.659e-24
Identity = 73/225 (32.44%), Postives = 115/225 (51.11%), Query Frame = 1
Query:  175 DVNSSEVK---IFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPI--KDEIKTCATSLESMLDFAGSIFGSE----TGFKTVTTKSTSNTFQNYTILEVQ---EIPASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCH 813
            D +  EV    +FF  +DL  G+K+ L+         A  L R  AD+ PF+ ++LP IL   S+P  S  A+ M  TL  CE   +  +D+ K C TSLESM++FA +  G+        + + T +     Q YT+  V+    +    MV CH M Y YA++GCH+         + V+L G +G  A+A++ CH D      +  +++ +G+  G++PVCH
Sbjct:   86 DTDMDEVSTDAVFFLEKDLFPGSKITLHFT--RGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECEAALLGARDQAKHCVTSLESMVEFAAASLGTRDIRAVSTEVIGTGAAETPRQEYTVEAVKPVVSVSGGNMVTCHGMPYAYAVFGCHT----TTATAYAVTLAGADGTRAEALATCHGDAFPGVAE--AYERVGVAAGSVPVCH 302          
BLAST of CK934928 vs. ExPASy Swiss-Prot
Match: GP1_SOLLC (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.484e-23
Identity = 72/210 (34.29%), Postives = 99/210 (47.14%), Query Frame = 1
Query:  202 FFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEI---PASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNG--DIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHY 816
            FF  + LK G  M +   I+D      FLPR  A   PFS  ++  + ++      S   K + D L  CE  P   E K C  S E M+DFA S+ G     +  TT+ T  +  N  I  V+ I     +K V+CH   YPY +Y CHS       +V+   ++  N    I   ++ CH+DTS W P H +F  LG  PG I VCH+
Sbjct:  415 FFREKMLKSGTIMPMP-DIKDKMPKRSFLPRVIASKLPFSTSKIAELKKIFHAGDESQVEKMIGDALSECERAPSAGETKRCVNSAEDMIDFATSVLGRNVVVR--TTEDTKGSNGNIMIGSVKGINGGKVTKSVSCHQTLYPYLLYYCHSVPKV---RVYEADILDPNSKVKINHGVAICHVDTSSWGPSHGAFVALGSGPGKIEVCHW 618          
BLAST of CK934928 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.317e-23
Identity = 71/210 (33.81%), Postives = 101/210 (48.10%), Query Frame = 1
Query:  202 FFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEI---PASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDN--GDIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHY 816
            FF  + LK G  M +   I+D      FLPR  A   PFS  ++  + ++      S  AK + D L  CE  P   E K C  S E M+DFA S+ G     +  TT++T+ +  N  I  ++ I     +K V+CH   YP  +Y CHS       +V+   ++  N    I   ++ CH+DTS W P H +F  LG  PG I VCH+
Sbjct:  417 FFREKMLKSGTIMPMP-DIKDKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVR--TTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKV---RVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFVALGSGPGKIEVCHW 620          
BLAST of CK934928 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.638e-23
Identity = 71/210 (33.81%), Postives = 101/210 (48.10%), Query Frame = 1
Query:  202 FFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEI---PASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDN--GDIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHY 816
            FF  + LK G  M +   I+D      FLPR  A   PFS  ++  + ++      S  AK + D L  CE  P   E K C  S E M+DFA S+ G     +  TT++T+ +  N  I  ++ I     +K V+CH   YP  +Y CHS       +V+   ++  N    I   ++ CH+DTS W P H +F  LG  PG I VCH+
Sbjct:  414 FFREKMLKSGTIMPMP-DIKDKMPKRSFLPRAIAAKLPFSTSKIDELKKIFHAANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVR--TTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKV---RVYEADILDPNSKAKINHGVAICHVDTSSWGPRHGAFIALGSGPGKIEVCHW 617          
BLAST of CK934928 vs. ExPASy Swiss-Prot
Match: JP650_ARATH (Probable polygalacturonase non-catalytic subunit JP650 OS=Arabidopsis thaliana GN=JP650 PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.363e-23
Identity = 69/208 (33.17%), Postives = 95/208 (45.67%), Query Frame = 1
Query:  202 FFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEIPASKM---VACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHY 816
            FF    LK G  + +   I+D      FLPR      PFS  +L  I  +      S     + D +  CE  P   E K C  S E M+DFA S+ G     +T  T++ + + +   I +V  I   K+   V+CH   YPY +Y CHS     + +   + L      I   I+ CH+DTS W P H +F  LG KPG I VCH+
Sbjct:  411 FFRESSLKEGTVIPMP-DIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLRT--TENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLEL-NSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHW 614          
BLAST of CK934928 vs. ExPASy Swiss-Prot
Match: BURPG_ORYSJ (BURP domain-containing protein 16 OS=Oryza sativa subsp. japonica GN=BURP16 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.640e-22
Identity = 68/210 (32.38%), Postives = 108/210 (51.43%), Query Frame = 1
Query:  199 IFFTLRDLKVGNKMALY-LPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEIPASKM---VACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHY 816
            IFF  ++LK GN + +  +  E  +  + FLPR  AD  PF  +    +  L  +   +  AKA+++T+  C++ P K E K C TS E M+DFA ++ G +   +  +T   +   ++  I +V+ I   K+   V+CH   +PY +Y CHS     + +   +  V     I   ++ CH+DTS WN  H +F  LG KPG   VCH+
Sbjct:  127 IFFREQELKEGNVVRMPDIANELTTARSSFLPRSIADRIPFKAEA---VKSLFGLEPNTTLAKAVDETVAQCQSSPSKGETKRCVTSAEDMIDFAVAMLGDDIVVR--STVLPNGPGESIMIGKVKGINGGKITSSVSCHEYLFPYMVYYCHSVPKIRVYEA-EILSVQTKEKINSGVAICHIDTSAWNAGHPAFVALGGKPGQNKVCHW 330          
BLAST of CK934928 vs. ExPASy Swiss-Prot
Match: JP630_ARATH (Probable polygalacturonase non-catalytic subunit JP630 OS=Arabidopsis thaliana GN=JP630 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.798e-22
Identity = 70/211 (33.18%), Postives = 100/211 (47.39%), Query Frame = 1
Query:  202 FFTLRDLKVGNKMALYLP-IEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEI---PASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVG--DNGDIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHY 816
            FF    LK G    +++P I+D      FLPR      PFS  ++  I  +      S     + D +R CE  P   E K C  S E M+DFA S+ G     +  TT+S + + +   I +V  I     +K V+CH   YPY +Y CHS       +V+   L+       I   I+ CH+DTS W  +H +F +LG +PG I VCH+
Sbjct:  407 FFRESMLKEGT--LIWMPDIKDKMPKRSFLPRSIVSKLPFSTSKIAEIKRVFHANDNSTMEGIITDAVRECERPPTVSETKRCVGSAEDMIDFATSVLGRSVVLR--TTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQSLYPYLLYYCHSVPKV---RVYESDLLDPKSKAKINHGIAICHMDTSAWGANHGAFMLLGSRPGQIEVCHW 610          
BLAST of CK934928 vs. ExPASy Swiss-Prot
Match: BURPE_ORYSJ (BURP domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=BURP14 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.040e-21
Identity = 68/208 (32.69%), Postives = 100/208 (48.08%), Query Frame = 1
Query:  184 SSEVKIFFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEIPA----SKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNGDIADAISACHLDTSQWNPDHLSFQILGIKPG 795
            S E   FF  RDL  GN+M +   I D +    FLPR+ A   PF       +  L      +   + +  T+  C   P + E K CATS E ++DFA  + G     +   T+ST+    +  +  V  +PA    ++ V+CH   +PY +Y CHS  T  + +   +  V  N  I   ++ CHLDTS W+P+H +F  LG KPG
Sbjct:  471 SPEPGKFFRERDLVAGNRMPMP-DIADRTPPRAFLPRDIAAKIPFDAAA---VSALFGAAPGTAMRQVVSSTVAECARPPSRGETKRCATSAEDVVDFAVEMLGDNVVARA--TESTAGGGGDVRLGRVAGVPAGGNVTRSVSCHQSLFPYLVYYCHSVPTVRVYEA-DILAVDSNQKINHGVAICHLDTSDWSPNHGAFIALGGKPG 671          
BLAST of CK934928 vs. ExPASy Swiss-Prot
Match: BURP9_ORYSJ (BURP domain-containing protein 9 OS=Oryza sativa subsp. japonica GN=BURP9 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 9.951e-20
Identity = 64/189 (33.86%), Postives = 100/189 (52.91%), Query Frame = 1
Query:  274 SAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCE-TDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQN--YTILEVQEIPASK-MVACHYMSYPYAIYGCHSHMTENINKVFRVSLV-GDNGD--IADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHYF 819
            S+ FL R  +   PFS+K +  IL + S P  +  A  +  TL+ CE T  +  E   CATS+ES+LD   S  G++   + +T  +      +  Y +     +P S+ M+ACH M YPY ++ CH   T    ++++VSLV G++G   I   ++ CH +TS W+  H  F  + +KPG    CH+F
Sbjct:  314 SSIFLHRNNSKHIPFSMKNITDILTMFS-PVSATMADGIAATLQACEHTGMVHGEKAKCATSIESLLDVVVSSLGTKL-VRALTPGAPMEGVPSLRYIVASATPVPNSQSMLACHDMLYPYKVFFCH---TPKQTRLYQVSLVSGESGRPLIDGLLAVCHQNTSDWDTGHPFFHFMDVKPGETTACHFF 497          
BLAST of CK934928 vs. ExPASy Swiss-Prot
Match: Y639_ARATH (Probable polygalacturonase non-catalytic subunit At1g60390 OS=Arabidopsis thaliana GN=At1g60390 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.697e-19
Identity = 67/210 (31.90%), Postives = 94/210 (44.76%), Query Frame = 1
Query:  202 FFTLRDLKVGNKMALYLPIEDHSNSAHFLPREEADSFPFSLKQLPYILELTSIPRVSPQAKAMEDTLRMCETDPIKDEIKTCATSLESMLDFAGSIFGSETGFKTVTTKSTSNTFQNYTILEVQEI---PASKMVACHYMSYPYAIYGCHSHMTENINKVFRVSLVGDNG--DIADAISACHLDTSQWNPDHLSFQILGIKPGTIPVCHY 816
            FF    LK G  M +   I+D      FLPR    + PFS   +  I  +      S  A  +   +  CE      E K C  S E M+DFA S+ G   G    TT++   + +   I +V  I     ++ V+CH   YPY +Y CHS       +V+   L+       I   ++ CH+DTS W+P H +F  LG  PG I VCH+
Sbjct:  409 FFREAMLKEGTLMQMP-DIKDKMPKRTFLPRNIVKNLPFSSSTIGEIWRVFGAGENSSMAGIISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGR--GVVVRTTENVVGSKKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRV---RVYETDLLDPKSLEKINHGVAICHIDTSAWSPSHGAFLALGSGPGQIEVCHW 612          
The following BLAST results are available for this feature:
BLAST of CK934928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
BURP8_ORYSJ6.659e-2432.44BURP domain-containing protein 8 OS=Oryza sativa s... [more]
GP1_SOLLC1.484e-2334.29Polygalacturonase-1 non-catalytic subunit beta OS=... [more]
GP3_SOLLC4.317e-2333.81Polygalacturonase non-catalytic subunit AroGP3 OS=... [more]
GP2_SOLLC5.638e-2333.81Polygalacturonase non-catalytic subunit AroGP2 OS=... [more]
JP650_ARATH7.363e-2333.17Probable polygalacturonase non-catalytic subunit J... [more]
BURPG_ORYSJ1.640e-2232.38BURP domain-containing protein 16 OS=Oryza sativa ... [more]
JP630_ARATH2.798e-2233.18Probable polygalacturonase non-catalytic subunit J... [more]
BURPE_ORYSJ4.040e-2132.69BURP domain-containing protein 14 OS=Oryza sativa ... [more]
BURP9_ORYSJ9.951e-2033.86BURP domain-containing protein 9 OS=Oryza sativa s... [more]
Y639_ARATH1.697e-1931.90Probable polygalacturonase non-catalytic subunit A... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004225_A02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IVF_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934928 ID=CK934928; Name=CK934928; organism=Citrus sinensis; type=EST; length=821bp
GGGGGAGTTATCCAGACCAAGATGGGTTTAGGATTAGCTTCTTGGAACAT
CCTTCTACAGCTCCTCCTCCTGTGCGCATACAGAAGCGGTGCCAGGGAAT
TGAGAGAGGAGTCTCTGCCTCAAATGGATGTTCAACTTCATCATATGCAT
ATAGCTCATCATTCATCCCATGTGGACGTAAACTCAAGCGAGGTCAAGAT
ATTCTTCACCTTGAGGGATCTAAAGGTAGGTAATAAAATGGCCCTCTATC
TTCCAATTGAAGATCATTCAAATTCTGCTCACTTTTTGCCTAGAGAAGAA
GCTGATTCCTTTCCATTTTCATTGAAACAACTTCCTTATATTCTTGAATT
AACCTCCATCCCACGCGTCTCACCGCAAGCCAAAGCCATGGAAGACACTC
TCAGGATGTGTGAAACCGATCCCATCAAAGATGAAATCAAAACTTGTGCT
ACCTCTTTAGAATCCATGCTTGATTTTGCTGGCAGCATCTTTGGCTCGGA
GACAGGTTTTAAAACTGTGACCACAAAGTCTACCAGTAATACTTTCCAAA
ATTATACAATCCTAGAGGTGCAAGAGATCCCTGCTTCCAAGATGGTAGCT
TGTCATTACATGTCCTATCCTTATGCAATTTACGGCTGCCATAGCCATAT
GACAGAGAACATCAACAAAGTATTCAGGGTTTCTCTGGTCGGTGACAATG
GAGATATAGCTGACGCTATTTCAGCTTGTCATCTGGATACCTCTCAGTGG
AATCCTGACCATCTATCATTTCAGATACTTGGTATTAAGCCGGGAACTAT
CCCCGTCTGCCACTACTTCCC
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