CK934944

Overview
NameCK934944
Unique NameCK934944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_METAC (Nucleoside-triphosphatase OS=Methanosarcina acetivorans GN=MA_3706 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.532e-21
Identity = 68/176 (38.64%), Postives = 97/176 (55.11%), Query Frame = 1
Query:   79 VTFVTGNAKKLEEVKAILGQ-SIPFQSLKLDLPELQ-GEPEDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALG---PNIEPITFLGKTPGKIV-PARGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKAL 588
            + FVTGN  K  E++ IL    I     K   PELQ  E E I+   A+  A ++N PV+V+D+ +  NAL G PGPY ++   K+G+  +  ++   ED++AY    F   +G   P  EP+ F G   GKI    RG   FG+DPIF+  G   T+ E+   EKNK+SHR +A+
Sbjct:    4 IVFVTGNKGKFAEIRDILKTFGIEVIQEKNGYPELQEDELEPIAAHGAQYVANKLNMPVMVDDSGIFINALNGFPGPYSRFVEDKLGNLKVLKMMEGEEDRTAY----FKTVIGYCEPGKEPLVFPGVVEGKIAYEERGTGGFGYDPIFEYQGL--TFGELGDTEKNKVSHRRRAV 173          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_PYRFU (Nucleoside-triphosphatase OS=Pyrococcus furiosus GN=PF0249 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.612e-21
Identity = 65/172 (37.79%), Postives = 96/172 (55.81%), Query Frame = 1
Query:   85 FVTGNAKKLEEVKAILGQSIPFQSLK--LDLPELQGEP-EDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPITFLGKTPGKIV-PARGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKAL 588
            F+T N  K+ E K  L + +    +K  L+ PE+Q +  ED+          +V+ P ++ED+ L   AL G PG Y  +  + IG +G+  L+   E++ AY      F  G   E   F+G+  G+I    RG + FG+DPIF PDG+D+T+AEM+ EEKN +SHR KAL
Sbjct:    5 FITSNDGKVREAKKFL-EPLGINVIKKPLEYPEIQADTLEDVVVFGLNWLKDKVDKPFIIEDSGLFIEALNGFPGVYSAYVYKTIGLDGILKLMEGIENRKAYFKSVIGFYDG---EIHLFVGEVRGRISNEKRGLHGFGYDPIFVPDGFDKTFAEMSTEEKNSVSHRGKAL 172          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_HYPBU (Nucleoside-triphosphatase OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0432 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.888e-20
Identity = 66/177 (37.29%), Postives = 91/177 (51.41%), Query Frame = 1
Query:   70 SRPVTFVTGNAKKLEEVKAIL---GQSI-PFQSLKLDLPELQGEPEDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPITFLGKTPGKIVPA-RGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKA 585
            +R +   T N  K+EE+  +L   G  + P  + KL++       ED++   A  A + +  PV+VED  L   AL G PGPY  +  + IG  GL  LL   E++ AY     A A    +E   F G   G I    RG   FG+DP+F P+G  +T+AEM  +EKNK SHR KA
Sbjct:    3 ARVILIATTNKHKIEEINEVLQSCGYRVEPAAASKLEVQS--NRLEDVAAYAAIQAYLALQRPVIVEDAGLFVEALGGFPGPYSSYVFKTIGIRGLLKLLEDVENRRAYFKSVIALAHSGGVE--VFTGTVHGVIAEKPRGDRGFGYDPVFIPEGSSKTFAEMETQEKNKFSHRGKA 175          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_METJA (Nucleoside-triphosphatase OS=Methanocaldococcus jannaschii GN=MJ0226 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.872e-19
Identity = 60/181 (33.15%), Postives = 100/181 (55.25%), Query Frame = 1
Query:   79 VTFVTGNAKKLEEVKAILG--QSIPFQSLKLDLPELQGEPEDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYEDKSAY--ALCGFAFALGPNIEPITFLGKTPGKI---VPARGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKALAMVK 600
            + F TGN  K++E   IL   + +  + +K+  PE+QG  E++++  A+     +  PV+VED+     AL G PG Y K+  + IG+EG+  LL   ++++AY   + G+    G  +    F G   G++   + ++G   F +D IF P+  ++T+AEM  EEK++ISHR KA    K
Sbjct:   11 IYFATGNPNKIKEANIILKDLKDVEIEQIKISYPEIQGTLEEVAEFGAKWVYNILKKPVIVEDSGFFVEALNGFPGTYSKFVQETIGNEGILKLLEGKDNRNAYFKTVIGYCDENGVRL----FKGIVKGRVSEEIRSKG-YGFAYDSIFIPEEEERTFAEMTTEEKSQISHRKKAFEEFK 186          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_BACTN (Nucleoside-triphosphatase OS=Bacteroides thetaiotaomicron GN=BT_3128 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.291e-19
Identity = 67/184 (36.41%), Postives = 93/184 (50.54%), Query Frame = 1
Query:   67 LSRPVTFVTGNAKKLEEVKAILGQSIPFQSLK-----LDLPELQGEPEDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNN---LLMAYEDK-SAYALCGFAFALGPNIEPITFLGKTPGKIVPA-RGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKAL 588
            + R + F T NA KLEE+ AILG  +   SL       D+PE     E  +  K+             +DT L   AL G PG Y   + +  GH+   N   LL   E K +  A    A +L  + +   F G   G+I+   RG + FG+DPIF+P+GY+QT+AE+  E KNKISHR+ A+
Sbjct:    1 MKRKLVFATNNAHKLEEIAAILGDKVELLSLNDIDCHTDIPETAETLEGNALLKSSFIYRNYQLDCFADDTGLEVEALNGAPGVYSARYAEGEGHDAQANMRKLLHELEGKENRKAQFRTAISLILDGKEYLFEGVIKGEIIKEKRGDSGFGYDPIFKPEGYEQTFAELGNETKNKISHRALAV 184          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_BACFR (Nucleoside-triphosphatase OS=Bacteroides fragilis GN=BF4588 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.483e-16
Identity = 62/184 (33.70%), Postives = 89/184 (48.37%), Query Frame = 1
Query:   67 LSRPVTFVTGNAKKLEEVKAILGQSIPFQSLK-----LDLPELQGEPEDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMAYED----KSAYALCGFAFALGPNIEPITFLGKTPGKIVPA-RGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKAL 588
            + R + F T NA KLEEV AILG  +   SL       D+PE     E  +  K+             +DT L   +L G PG Y   +    GH    N+L    +     +  A    A +L  + +   F G   G+I+   RG + FG+DP+F P+GYD+T+AE+  E KN+ISHR+ A+
Sbjct:    1 MKRKLVFATNNAHKLEEVSAILGDKVELLSLNDINCHTDIPETAETLEGNAYLKSSFIYRNYGLNCFADDTGLEVESLGGAPGVYSARYAGGEGHNAEANMLKLLHELEGKDNRRAQFRTAISLILDEKEYLFEGIIKGEIIKEKRGDSGFGYDPVFVPEGYDRTFAELGNEIKNQISHRALAV 184          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_GEOSL (Nucleoside-triphosphatase OS=Geobacter sulfurreducens GN=GSU1794 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16
Identity = 65/192 (33.85%), Postives = 95/192 (49.48%), Query Frame = 1
Query:   91 TGNAKKLEEVKAILGQSIPFQSLKL----DLPELQGEP---EDISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLNNLLMA-------YEDKSAYALCGFAFALGPNIEPITFLGKTPGKIVPA-RGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKALAMVKSHFAEAG 621
            T N  KL E+ AIL   +PF  L L    D PE++ +    E+ + +KA +AA     P L +D+ L  +AL G PG Y   +  +   +  NN  +        YE+++A   C  A    P  +  TF G+  G I+ + RG   FG+DP+F       T AE+  E KN +SHR +ALA++K H    G
Sbjct:    8 TRNKGKLREIAAIL-DGLPFTLLSLEDFPDFPEVEEDGKTFEENALKKASVAANITGLPALADDSGLVVDALDGKPGVYSARYSGENASDEANNAKLLSELESVPYEERTAAFRCTIALC-SPGGKRYTFSGELHGVILDSPRGTGGFGYDPLFFVSEKGATMAELPLEAKNAVSHRGRALALLKDHLGWQG 197          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_GLUOX (Nucleoside-triphosphatase OS=Gluconobacter oxydans GN=GOX1281 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.772e-15
Identity = 59/181 (32.60%), Postives = 94/181 (51.93%), Query Frame = 1
Query:   79 VTFVTGNAKKLEEVKAILGQS--IPFQSLKLDLPELQGEPEDISKEKA--RLAAIQVNG-PVLVEDTCLCFNALKGLPGPY-IKWFL----QKIGHEGLNNLLMAYEDKSAYALCGFAFALGPNIEPITFLGKTPGKIV-PARGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKAL 588
            +   + NA KL E   +L +S      + +LDLPE +   E  +   A   LAA + +G P L +D+  C +AL   PG Y  +W       ++  E ++  +    D+ A+ +     A  P+ E  T  G+  G +V P RG +  G+DP+F P+G  +T+AEM++ EKN +SHR +AL
Sbjct:   11 IVLASHNAGKLREFSTLLAESGITVISAAELDLPEPEETEETFTGNAAIKALAAARASGLPALADDSGFCVSALDNRPGVYSARWGGPTKDMQVAMERVHREMGDNPDQRAFFVAALCLAW-PDGETRTVQGECHGTVVWPPRGDHGHGYDPMFVPEGESRTFAEMSEAEKNAVSHRGRAL 190          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_DESPS (Nucleoside-triphosphatase OS=Desulfotalea psychrophila GN=DP0707 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.232e-15
Identity = 62/187 (33.16%), Postives = 98/187 (52.41%), Query Frame = 1
Query:   79 VTFVTGNAKKLEEVKAILGQ-SIPFQSLKL--DLPELQGEPEDISK---EKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFLQKIGHEGLN-----NLLMAYEDKSAYALCGFAFALGPNIEPITFLGKTPGKIVPA-RGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKALAMVKS 603
            +   T N  K++E + IL   +I  +SL     +PE   + +D  +   +KA   A  +  P + +D+ L  +AL G PG Y   +  +   +  N       L   ED+SA   C  + A  P    +T+ G+  GKI+   RG + FG+DP+F    YD+T+AE++ EEKN++SHR KALA +K+
Sbjct:    5 IVLATTNQNKVKEFQEILKDFAIEIRSLAEFGPIPEAIEDGKDFDENAYKKAIHTAKILGIPAIADDSGLEVHALNGAPGVYSARYSGEGATDASNCDKLLEELAGKEDRSANFTCVISIAT-PGGPALTYEGRCDGKILTEKRGKSGFGYDPLFYFAEYDKTFAELSMEEKNRVSHRGKALAEIKA 190          
BLAST of CK934944 vs. ExPASy Swiss-Prot
Match: NTPA_THEYD (Nucleoside-triphosphatase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=THEYE_A1837 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.140e-15
Identity = 65/186 (34.95%), Postives = 95/186 (51.08%), Query Frame = 1
Query:   79 VTFVTGNAKKLEEVKAIL-GQSIPFQSLKLDLPELQGEPED------ISKEKARLAAIQVNGPVLVEDTCLCFNALKGLPGPYIKWFL--QKIGHEGLNNLL-----MAYEDKSAYALCGFAFALGPNIEPITFLGKTPGKI--VPARGPNDFGWDPIFQPDGYDQTYAEMAKEEKNKISHRSKAL 588
            +   + N KK+EE+K IL G  I   S+  D PEL+   ED       + +KAR    Q   P L +D+ L   AL G PG     +   +    + +  LL     +  E ++A  +C  A    P+ +   F G   GKI  +P RG   FG+DP+F P+G+ +T+AEM+  EK+KISHR +AL
Sbjct:    3 IVIASRNRKKIEELKRILQGLEITILSVN-DFPELEEVKEDGLTFDENALKKARYVCQQTGLPALSDDSGLEVEALGGRPGVRSARYAGDEASDDDNIKKLLEELAGVPSEKRTAQFVCCIALVF-PDGKEYIFWGYVRGKISEIP-RGTQGFGYDPVFIPEGFKKTFAEMSPHEKDKISHRKEAL 185          
The following BLAST results are available for this feature:
BLAST of CK934944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
NTPA_METAC1.532e-2138.64Nucleoside-triphosphatase OS=Methanosarcina acetiv... [more]
NTPA_PYRFU2.612e-2137.79Nucleoside-triphosphatase OS=Pyrococcus furiosus G... [more]
NTPA_HYPBU2.888e-2037.29Nucleoside-triphosphatase OS=Hyperthermus butylicu... [more]
NTPA_METJA1.872e-1933.15Nucleoside-triphosphatase OS=Methanocaldococcus ja... [more]
NTPA_BACTN9.291e-1936.41Nucleoside-triphosphatase OS=Bacteroides thetaiota... [more]
NTPA_BACFR1.483e-1633.70Nucleoside-triphosphatase OS=Bacteroides fragilis ... [more]
NTPA_GEOSL5.637e-1633.85Nucleoside-triphosphatase OS=Geobacter sulfurreduc... [more]
NTPA_GLUOX4.772e-1532.60Nucleoside-triphosphatase OS=Gluconobacter oxydans... [more]
NTPA_DESPS6.232e-1533.16Nucleoside-triphosphatase OS=Desulfotalea psychrop... [more]
NTPA_THEYD8.140e-1534.95Nucleoside-triphosphatase OS=Thermodesulfovibrio y... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004224_H12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IIIF_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934944 ID=CK934944; Name=CK934944; organism=Citrus sinensis; type=EST; length=873bp
GGGGACCCTTGGAACGTTTCAAAAGAAAGCAAAATGGCAGCGGTGGCAAG
AGGACAGGGGTTTGTACTGTCGCGGCCGGTGACGTTCGTAACGGGGAACG
CCAAGAAATTGGAAGAAGTGAAAGCCATATTGGGGCAATCCATTCCCTTT
CAGTCTCTCAAGCTGGACCTGCCGGAATTGCAAGGGGAACCTGAAGATAT
CTCCAAAGAGAAGGCTCGTTTGGCTGCCATTCAAGTTAACGGCCCTGTGC
TCGTTGAAGATACTTGTCTCTGCTTCAATGCCTTGAAGGGTCTTCCTGGC
CCTTACATCAAGTGGTTCCTGCAGAAGATTGGTCATGAAGGTCTGAACAA
TTTGTTGATGGCATATGAGGATAAATCTGCTTATGCGTTGTGTGGATTTG
CTTTTGCTCTTGGGCCCAACATTGAGCCCATTACTTTCTTAGGGAAAACT
CCGGGTAAGATAGTTCCTGCTAGGGGTCCCAATGATTTTGGATGGGATCC
AATCTTTCAACCCGATGGTTATGACCAAACTTATGCGGAGATGGCAAAGG
AAGAAAAGAACAAAATTTCTCATCGTTCCAAGGCTCTTGCTATGGTGAAA
TCCCACTTTGCTGAAGCTGGATATACTTTTCAGATGGACACATCCACATG
AATGAACTGTATAGGTCAGACAGTCAAATGCTTTATCTCTATTTGTGTCT
TCTGGTGGAAGGGATAAAGCAAAGCCTGCAGATTATTTATCCATCCTGGC
TTGCGTAGGACAATCCATGGGTAACTTTTTCCTACATATGTGATTGTCTA
GTGAAACAAATGAGCTTGCAATTTTCGGTTAATTTGTTCNTGCGGTGAAA
CTTTACGTCAGTCATCATTTNNN
back to top