CK935027

Overview
NameCK935027
Unique NameCK935027
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935027 vs. ExPASy Swiss-Prot
Match: ANXA9_BOVIN (Annexin A9 OS=Bos taurus GN=ANXA9 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16
Identity = 62/207 (29.95%), Postives = 97/207 (46.86%), Query Frame = 1
Query:   94 SVTEDCEQLRKAFEGWGTNEQLIISILAHRNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYR--YEGDEVNITLAKSEAKILHEKISNKAYNDEDLIRILATRSKAQINATLNQYKNVYGNDI 708
            S  +D ++L KA  G G +   I+ +L +R+  QR+LI + + +   +DLLKSL   L+ + ER+V+      A  DA     A K   S+  V +EI  TR+  QL E    Y   F+    ED+   T G  R LLL L    R  Y G  ++  LA  + + L  K +     +   + +   R+   +   LNQY+   G+ +
Sbjct:   42 SADKDVQRLLKAIAGQGVDRIAILDVLTNRSREQRQLISRAFHERTQQDLLKSLQAALSGNLERIVVALLQPAAHLDARELRTALKGSGSAEDVALEILATRTPPQLQECLAVYKHNFQVDAAEDIKSETRGILRDLLLALAKGGREAYTG-IIDYNLAAQDVQAL--KQAEGPSTERTWVLVFTQRNPEHLVRVLNQYQWYTGHGL 245          
BLAST of CK935027 vs. ExPASy Swiss-Prot
Match: ANXA2_RAT (Annexin A2 OS=Rattus norvegicus GN=Anxa2 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16
Identity = 60/221 (27.15%), Postives = 105/221 (47.51%), Query Frame = 1
Query:   43 QGDHETMSTL---TVPAQVPSVTEDCEQLRKAFEGWGTNEQLIISILAHRNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYE-GDEVNITLAKSEAKILHEK-ISNKAYNDEDLIRILATRSKAQINATLNQYKN 690
            +GDH T  +      P        D   +  A +  G +E  I++IL +R+ AQR+ I   Y     ++L  ++   L+   E V++     PA+ DA     + K   +    L+EI C+R++++L E  + Y   +K  LE+D+   T+G+FRKLL+ L    R E G  ++  L   +A+ L++  +  K  +    I I+  RS   +     +YK+
Sbjct:   14 EGDHSTPPSAYGSVKPYTNFDAERDALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELPSAMKSALSGHLETVMLGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGEFRKLLVALAKGKRAEDGSVIDYELIDQDARELYDAGVKRKGTDVPKWISIMTERSVCHLQKVFERYKS 234          
BLAST of CK935027 vs. ExPASy Swiss-Prot
Match: ANXA2_CHICK (Annexin A2 OS=Gallus gallus GN=ANXA2 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16
Identity = 61/221 (27.60%), Postives = 103/221 (46.61%), Query Frame = 1
Query:   43 QGDHETMSTLTVPAQVPS---VTEDCEQLRKAFEGWGTNEQLIISILAHRNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEV-NITLAKSEAKILHEK-ISNKAYNDEDLIRILATRSKAQINATLNQYKN 690
            +GDH    +     +  S      D   L  A +  G +E  II+IL +R+  QR+ I   Y     ++L  +L   L+   E V++     P++ DA     A K   +    L+EI C+R++++L E  + Y   +K  LE+D+   T+GDFRKL++ L    R E   V +  L   +A+ L++  +  K  +    I I+  RS   +     +YK+
Sbjct:   14 EGDHSLPPSAYATVKAYSNFDADRDAAALEAAIKTKGVDEVTIINILTNRSNEQRQDIAFAYQRRTKKELSAALKSALSGHLEAVILGLLKTPSQYDASELKAAMKGLGTDEDTLIEIICSRTNQELNEINRVYREMYKTELEKDIISDTSGDFRKLMVALAKGKRCEDTSVIDYELIDQDARELYDAGVKRKGTDVPKWINIMTERSVPHLQKVFERYKS 234          
BLAST of CK935027 vs. ExPASy Swiss-Prot
Match: ANX2A_XENLA (Annexin A2-A OS=Xenopus laevis GN=anxa2-A PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.938e-16
Identity = 58/198 (29.29%), Postives = 98/198 (49.49%), Query Frame = 1
Query:  103 EDCEQLRKAFEGWGTNEQLIISILAHRNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRY-EGDEVNITLAKSEAKILHEK-ISNKAYNDEDLIRILATRSKAQINATLNQYKN 690
            +D   +  A +  G +E  II+IL +R+  QR+ I   Y     +DL  +L   L+ + E V++       + DA     + K   +    L+EI C+R++K+LL+ + AY   +K  LE+D+   T+GDFRKL++ L    R  EG  V+      +A+ L+E  +  K  +    I I+  RS   +     +YK+
Sbjct:   38 KDAAAIETAIKTKGVDELTIINILTNRSNDQRQDIAFAYHRRTKKDLASALKGALSGNLETVMLGLIKTRPQYDASELKASMKGLGTDEDTLIEIICSRTNKELLDIQNAYRELYKTELEKDIVSDTSGDFRKLMVALAKGKRQEEGSVVDYEKIDQDARELYEAGVKRKGTDVGKWITIMTERSTPHLQKVFERYKS 235          
BLAST of CK935027 vs. ExPASy Swiss-Prot
Match: ANXA1_RODSP (Annexin A1 OS=Rodentia sp. GN=ANXA1 PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 7.567e-15
Identity = 55/204 (26.96%), Postives = 91/204 (44.61%), Query Frame = 1
Query:  100 TEDCEQLRKAFEGWGTNEQLIISILAHRNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLAKSEAKILHEKISNKAYNDEDLIR-ILATRSKAQINATLNQYKNVYGNDI 708
            + D   L K     G +E  I+ +L  R  AQR  ++  Y    GE L ++L K LT   + +++     PA+ D      A K   +  + L+EI  TRS++Q+ E    Y    KK + +     T+G+FR  LL L    R E   VN  +A ++A+ L++    +   D ++   IL T+    +      Y+     D+
Sbjct:   45 SSDVAALHKGIMVNGVDEATILDLLTKRYNAQRHHLKAVYIQETGEPLDETLKKALTGHIQELLLAMIKTPAQFDGNELRAAMKAVGTDEETLIEILWTRSNQQIREITSVYREELKKDIAKYQTSDTSGEFRDALLALAKGNRCEDMSVNQDIADTDARALYQAAERRNGTDVNVFNTILTTKKYPHLRNKFQNYRKYTEEDM 248          
The following BLAST results are available for this feature:
BLAST of CK935027 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ANXA9_BOVIN8.938e-1629.95Annexin A9 OS=Bos taurus GN=ANXA9 PE=2 SV=1[more]
ANXA2_RAT8.938e-1627.15Annexin A2 OS=Rattus norvegicus GN=Anxa2 PE=1 SV=2[more]
ANXA2_CHICK8.938e-1627.60Annexin A2 OS=Gallus gallus GN=ANXA2 PE=1 SV=2[more]
ANX2A_XENLA8.938e-1629.29Annexin A2-A OS=Xenopus laevis GN=anxa2-A PE=2 SV=... [more]
ANXA1_RODSP7.567e-1526.96Annexin A1 OS=Rodentia sp. GN=ANXA1 PE=2 SV=3[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004222_H03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935027 ID=CK935027; Name=CK935027; organism=Citrus sinensis; type=EST; length=708bp
GGAGCGCACAGAATCAGATTTGAGTAAGTTCTGAAAGAAGAACAAGGAGA
TCACGAAACAATGTCAACACTTACAGTTCCAGCGCAAGTTCCATCTGTTA
CTGAAGACTGTGAGCAGCTCAGAAAAGCCTTTGAAGGATGGGGAACAAAC
GAGCAACTGATCATATCGATACTGGCTCACAGAAATGCTGCTCAACGCAA
GTTGATTCGACAAACATATGCTGATACTTACGGCGAAGACCTCCTCAAGT
CGCTCGACAAGGAACTCACTAATGACTTTGAGAGGGTGGTGATGCTCTGG
ACTCTTGATCCTGCTGAACGTGATGCGTTTTTGGCTAATGAAGCCACTAA
GAGGTGGACTTCTAGCAACCAGGTTCTTATGGAAATTGCATGCACCAGGT
CTTCGAAGCAATTGCTCGAAGCAAGGCAGGCTTATCATGCTCGTTTTAAG
AAGTCCCTTGAAGAGGATGTTGGTTATCACACCAATGGGGACTTCCGCAA
GCTTTTGCTACCCCTTGTGACTGCCTACCGATATGAGGGTGATGAGGTGA
ACATTACACTTGCAAAATCAGAAGCTAAGATTCTCCATGAGAAGATTTCT
AATAAGGCTTACAATGATGAGGATCTCATCAGGATCTTGGCTACAAGGAG
CAAAGCACAGATCAATGCGACTCTGAATCAATACAAGAATGTATATGGGA
ATGATATT
back to top