CK935028
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 5.779e-30 Identity = 56/117 (47.86%), Postives = 77/117 (65.81%), Query Frame = 3
Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791
+L PVD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FA+ WVPFCKKY+++ RAP YF +D + MK+EY++ +
Sbjct: 344 QLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVQASFVKDRRAMKREYEEFKVRV 460 HSP 2 Score: 36.5798 bits (83), Expect = 5.779e-30 Identity = 16/38 (42.11%), Postives = 21/38 (55.26%), Query Frame = 1
Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
W L+ +CE F WIL KW+P+ +TY RL R
Sbjct: 298 WLLSVICEIWFALSWILDQFPKWSPINRETYLDRLALR 335
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 5.779e-30 Identity = 56/117 (47.86%), Postives = 77/117 (65.81%), Query Frame = 3
Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791
+L PVD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FA+ WVPFCKKY+++ RAP YF +D + MK+EY++ +
Sbjct: 344 QLAPVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFCKKYSIEPRAPEWYFAQKIDYLKDKVQASFVKDRRAMKREYEEFKVRV 460 HSP 2 Score: 36.5798 bits (83), Expect = 5.779e-30 Identity = 16/38 (42.11%), Postives = 21/38 (55.26%), Query Frame = 1
Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
W L+ +CE F WIL KW+P+ +TY RL R
Sbjct: 298 WLLSVICEIWFALSWILDQFPKWSPINRETYLDRLALR 335
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.660e-29 Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 3
Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698
+L PVD FV+T D EPP++T NTVLS+L+VDYPV K++CYVSDD + L F +L E S+FAK WVPFCKK+N++ RAP YF
Sbjct: 354 QLAPVDFFVSTVDPSKEPPLVTANTVLSILSVDYPVEKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKFNIEPRAPEWYF 437 HSP 2 Score: 36.1946 bits (82), Expect = 1.660e-29 Identity = 18/44 (40.91%), Postives = 23/44 (52.27%), Query Frame = 1
Query: 199 NHGFA-WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
N FA W ++ +CE F WIL KW P+ +TY RL R
Sbjct: 302 NDAFALWLISVICEIWFAMSWILDQFPKWLPIERETYLDRLSLR 345
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA1_ARATH (Cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Arabidopsis thaliana GN=CESA1 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.815e-29 Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 3
Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791
+L PVD+FV+T D EPP++T NTVLS+L+VDYPV K+ACYVSDD + L F SL E ++FAK WVPFCKK+N++ RAP YF ++ + MK+EY++ I
Sbjct: 350 QLVPVDVFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVACYVSDDGSAMLTFESLSETAEFAKKWVPFCKKFNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRI 466 HSP 2 Score: 35.4242 bits (80), Expect = 2.815e-29 Identity = 17/44 (38.64%), Postives = 22/44 (50.00%), Query Frame = 1
Query: 196 KNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
KN W + +CE F F W+L KW P+ +TY RL R
Sbjct: 298 KNAYPLWLTSVICEIWFAFSWLLDQFPKWYPINRETYLDRLAIR 341
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.777e-29 Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 3
Query: 450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698
L PVD FV+T D EPP+IT NTVLS+LAVDYPV K++CYVSDD + L F SL E ++FA+ WVPFCKKY+++ RAP YF
Sbjct: 264 LAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYF 346 HSP 2 Score: 35.8094 bits (81), Expect = 4.777e-29 Identity = 16/38 (42.11%), Postives = 20/38 (52.63%), Query Frame = 1
Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
W + +CE F F WIL KW P+ +TY RL R
Sbjct: 218 WMTSVICEIWFGFSWILDQFPKWCPINRETYVDRLIAR 255
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 4.777e-29 Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 3
Query: 450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698
L PVD FV+T D EPP+IT NTVLS+LAVDYPV K++CYVSDD + L F SL E ++FA+ WVPFCKKY+++ RAP YF
Sbjct: 264 LAPVDFFVSTVDPLKEPPLITANTVLSILAVDYPVEKISCYVSDDGSAMLTFESLAETAEFARRWVPFCKKYSIEPRAPEFYF 346 HSP 2 Score: 35.8094 bits (81), Expect = 4.777e-29 Identity = 16/38 (42.11%), Postives = 20/38 (52.63%), Query Frame = 1
Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
W + +CE F F WIL KW P+ +TY RL R
Sbjct: 218 WMTSVICEIWFGFSWILDQFPKWCPINRETYVDRLIAR 255
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.086e-29 Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 3
Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791
+L P+D FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L F +L E S+FAK WVPFCKKY+++ RAP YF ++ + MK+EY++ I
Sbjct: 354 QLAPIDFFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKKYSIEPRAPEWYFQQKIDYLKDKVAPYFVRERRAMKREYEEFKVRI 470 HSP 2 Score: 34.2686 bits (77), Expect = 8.086e-29 Identity = 15/38 (39.47%), Postives = 20/38 (52.63%), Query Frame = 1
Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
W ++ +CE F WIL KW P+ +TY RL R
Sbjct: 308 WLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLR 345
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 8.092e-29 Identity = 58/130 (44.62%), Postives = 81/130 (62.31%), Query Frame = 3
Query: 450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTG 833
L PVD+FV+T D EPP++T NTVLS+LA+DYPV K++CYVSDD S L F SL E ++FA+ WVPFCKK++++ RAP YF ++ + MK+EY++ I ++S L G
Sbjct: 314 LAPVDVFVSTVDPLKEPPLVTSNTVLSILAMDYPVEKISCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEMYFTLKVDYLQDKVHPTFVKERRAMKREYEEFKVRINAQVAKASKVPLEG 443 HSP 2 Score: 33.113 bits (74), Expect = 8.092e-29 Identity = 15/38 (39.47%), Postives = 19/38 (50.00%), Query Frame = 1
Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
W + +CE F WIL KW P+ +TY RL R
Sbjct: 267 WLTSVICEIWFAVSWILDQFPKWFPIERETYLDRLSLR 304
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 1.053e-28 Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 3
Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791
+L VD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD + L+F SL E S+FA+ WVPFCKKY+++ RAP YF +D + MK+EY++ I
Sbjct: 334 QLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLAETSEFARKWVPFCKKYSIEPRAPEWYFAAKIDYLKDKVQTSFVKDRRAMKREYEEFKIRI 450 HSP 2 Score: 33.8834 bits (76), Expect = 1.053e-28 Identity = 15/38 (39.47%), Postives = 20/38 (52.63%), Query Frame = 1
Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
W ++ +CE F WIL KW P+ +TY RL R
Sbjct: 288 WLVSVICEIWFALSWILDQFPKWFPVNRETYLDRLALR 325
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.371e-28 Identity = 56/117 (47.86%), Postives = 77/117 (65.81%), Query Frame = 3
Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791
+L PVD+FV+T D EPP++T NTVLS+LAVDYPV K+ACYVSDD + L F +L E ++F+K WVPFCKK+N++ RAP YF ++ + MK+EY++ I
Sbjct: 337 QLAPVDVFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVACYVSDDGSAMLTFEALSETAEFSKKWVPFCKKFNIEPRAPEFYFSQKIDYLKDKIQPSFVKERRAMKREYEEFKVRI 453 HSP 2 Score: 33.4982 bits (75), Expect = 1.371e-28 Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1
Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
W + +CE F F W+L KW P+ +T+ RL R
Sbjct: 291 WLTSVICEIWFAFSWLLDQFPKWYPINRETFLDRLALR 328 The following BLAST results are available for this feature:
BLAST of CK935028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935028 ID=CK935028; Name=CK935028; organism=Citrus sinensis; type=EST; length=868bpback to top |