CK935028

Overview
NameCK935028
Unique NameCK935028
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSJ (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.784e-28
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 3 
Query:  447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791
            +L PVD FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  + L F +L E S+FAK WVPFCK+Y+++ RAP  YF                ++ + MK+EY++    I
Sbjct:  353 QLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYFQQKIDYLKDKVAPNFVRERRAMKREYEEFKVRI 469

HSP 2 Score: 34.2686 bits (77), Expect = 1.784e-28
Identity = 15/38 (39.47%), Postives = 20/38 (52.63%), Query Frame = 1 
Query:  214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
            W ++ +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  307 WLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLR 344
[Close]
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA5_ORYSI (Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.784e-28
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 3 
Query:  447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791
            +L PVD FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  + L F +L E S+FAK WVPFCK+Y+++ RAP  YF                ++ + MK+EY++    I
Sbjct:  353 QLAPVDFFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAKKWVPFCKRYSLEPRAPEWYFQQKIDYLKDKVAPNFVRERRAMKREYEEFKVRI 469

HSP 2 Score: 34.2686 bits (77), Expect = 1.784e-28
Identity = 15/38 (39.47%), Postives = 20/38 (52.63%), Query Frame = 1 
Query:  214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
            W ++ +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  307 WLISVICEIWFAMSWILDQFPKWFPIERETYLDRLTLR 344
[Close]
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.024e-28
Identity = 56/117 (47.86%), Postives = 75/117 (64.10%), Query Frame = 3 
Query:  447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791
            +L  VD+FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  + L F +L E S+FA+ WVPF KKYN++ RAP  YF                +D + MK+EY++    I
Sbjct:  351 QLAAVDIFVSTVDPMKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFDALAETSEFARKWVPFVKKYNIEPRAPEWYFSQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRI 467

HSP 2 Score: 35.4242 bits (80), Expect = 3.024e-28
Identity = 16/38 (42.11%), Postives = 20/38 (52.63%), Query Frame = 1 
Query:  214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
            W L+ +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  305 WLLSVICEIWFALSWILDQFPKWFPINRETYLDRLALR 342
[Close]
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.125e-28
Identity = 55/117 (47.01%), Postives = 77/117 (65.81%), Query Frame = 3 
Query:  447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791
            +L P+D+FV+T D   EPP+IT NTVLS+LAVDYPV K++CYVSDD  + L F +L E ++FA+ WVPFCKK+N++ RAP  YF                ++ + MK+EY++    I
Sbjct:  347 QLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRI 463

HSP 2 Score: 33.4982 bits (75), Expect = 5.125e-28
Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1 
Query:  214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
            W ++ +CE  F   W+L    KW P+  +TY  RL  R
Sbjct:  301 WLVSVICEIWFALSWLLDQFPKWYPINRETYLDRLALR 338
[Close]
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 5.125e-28
Identity = 55/117 (47.01%), Postives = 77/117 (65.81%), Query Frame = 3 
Query:  447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791
            +L P+D+FV+T D   EPP+IT NTVLS+LAVDYPV K++CYVSDD  + L F +L E ++FA+ WVPFCKK+N++ RAP  YF                ++ + MK+EY++    I
Sbjct:  347 QLAPIDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRI 463

HSP 2 Score: 33.4982 bits (75), Expect = 5.125e-28
Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1 
Query:  214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
            W ++ +CE  F   W+L    KW P+  +TY  RL  R
Sbjct:  301 WLVSVICEIWFALSWLLDQFPKWYPINRETYLDRLALR 338
[Close]
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.131e-28
Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 3 
Query:  447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698
            +L  VD FV+T D   EPP+IT NTVLS+LA+DYPV K++CYVSDD  + L+F SLVE + FA+ WVPFCKKY+++ RAP  YF
Sbjct:  259 QLAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDGAAMLSFESLVETADFARKWVPFCKKYSIEPRAPEFYF 342

HSP 2 Score: 35.039 bits (79), Expect = 5.131e-28
Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1 
Query:  214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
            W  + +CE  F   W+L    KW+P+  +TY  RL  R
Sbjct:  213 WLTSVICEIWFAVSWVLDQFPKWSPINRETYIDRLSAR 250
[Close]
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA2_ARATH (Cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Arabidopsis thaliana GN=CESA2 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 8.684e-28
Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 3 
Query:  450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698
            L PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L + ++FA+ WVPFCKK+N++ RAP  YF
Sbjct:  353 LAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSDTAEFARKWVPFCKKFNIEPRAPEWYF 435

HSP 2 Score: 33.113 bits (74), Expect = 8.684e-28
Identity = 15/38 (39.47%), Postives = 19/38 (50.00%), Query Frame = 1 
Query:  214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
            W  + +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  306 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLR 343
[Close]
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 8.684e-28
Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 3 
Query:  450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698
            L PVD+FV+T D   EPP+IT NTVLS+LAVDYPV K+ACYVSDD  + L F +L E ++FA+ WVPFCKKY ++ RAP  YF
Sbjct:  352 LSPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYCIEPRAPEWYF 434

HSP 2 Score: 33.8834 bits (76), Expect = 8.684e-28
Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1 
Query:  214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
            W ++ +CE  F   W+L    KW P+  +TY  RL  R
Sbjct:  305 WLISVICEIWFAVSWVLDQFPKWYPIERETYLDRLSLR 342
[Close]
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 8.686e-28
Identity = 55/116 (47.41%), Postives = 74/116 (63.79%), Query Frame = 3 
Query:  450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791
            L P+D FV+T D   EPPIIT NTVLS+LAVDYPV +++CYVSDD  S L F +L E ++FA+ WVPFCKK+ ++ RAP  YF                ++ + MK+EY++    I
Sbjct:  289 LAPIDFFVSTVDPLKEPPIITANTVLSILAVDYPVDRVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKFTIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRI 404

HSP 2 Score: 36.1946 bits (82), Expect = 8.686e-28
Identity = 16/38 (42.11%), Postives = 21/38 (55.26%), Query Frame = 1 
Query:  214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
            W  + +CE  F   WIL    KW+P+T +TY  RL  R
Sbjct:  242 WLASVICELWFALSWILDQLPKWSPVTRETYLDRLALR 279
[Close]
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 8.687e-28
Identity = 56/116 (48.28%), Postives = 75/116 (64.66%), Query Frame = 3 
Query:  450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791
            L  VD+FV+T D   EPP++T NTVLS+LAVDYPV K++CYVSDD  S L F SL E ++FA+ WVPFCKK++++ RAP  YF                Q+ + MK+EY++    I
Sbjct:  343 LSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYFSQKVDYLKDKVHPNFVQERRAMKREYEEFKVRI 458

HSP 2 Score: 33.4982 bits (75), Expect = 8.687e-28
Identity = 15/38 (39.47%), Postives = 19/38 (50.00%), Query Frame = 1 
Query:  214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
            W  + +CE  F   WIL    KW P+  +TY  RL  R
Sbjct:  296 WLTSIICEIWFAVSWILDQFPKWYPIDRETYLDRLSLR 333
The following BLAST results are available for this feature:
BLAST of CK935028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CESA5_ORYSJ1.784e-2847.86Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA5_ORYSI1.784e-2847.86Probable cellulose synthase A catalytic subunit 5 ... [more]
CESA8_ORYSJ3.024e-2847.86Probable cellulose synthase A catalytic subunit 8 ... [more]
CESA1_ORYSJ5.125e-2847.01Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA1_ORYSI5.125e-2847.01Probable cellulose synthase A catalytic subunit 1 ... [more]
CESA8_ARATH5.131e-2860.71Cellulose synthase A catalytic subunit 8 [UDP-form... [more]
CESA2_ARATH8.684e-2861.45Cellulose synthase A catalytic subunit 2 [UDP-form... [more]
CESA6_ARATH8.684e-2862.65Cellulose synthase A catalytic subunit 6 [UDP-form... [more]
CESA7_ORYSJ8.686e-2847.41Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA9_ORYSJ8.687e-2848.28Cellulose synthase A catalytic subunit 9 [UDP-form... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004222_H04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935028 ID=CK935028; Name=CK935028; organism=Citrus sinensis; type=EST; length=868bp
GGGGACATCTATTAATGCCGAAACACCAAAAATAAAAAAAACGAGTACTT
GTTTTTCAAGCTCATGGCCAATACAAAGTCGTCATGTCTCCCTCTATACG
AAAAAGTTTTTCATAAAAACACATATCATAGGGCTTTAGATGTTATCATC
TTGTTCCTTCTTCTATGTCTGCTCTTCTATCGGCTCTCAACGTTGAAGAA
TCATGGATTTGCTTGGTTTCTTGCTTTTCTATGTGAGTCTTGTTTTACTT
TCATCTGGATTCTCATCGTCAACTGCAAGTGGACTCCTTTGACCTACAAA
ACATATCCCCAACGTCTCCAAGAAAGGTAACAAATCAAATAACGTTAGCA
TTAATAATTTCCGCATCATTTGCAATTGTCTTTGTCATTTTGCAAGTTAC
TACACACACACACACACACACATGTGTACGACTCAACAGGATACAGGAGC
TGCCCCCAGTGGACATGTTTGTGACAACTGCTGATGCTGAACTCGAGCCG
CCAATCATCACTGTAAACACAGTGCTGTCTTTGTTGGCAGTTGATTATCC
AGTTCACAAGCTCGCTTGCTATGTTTCTGATGATGCCTGCTCACCTCTCA
ATTTCTACTCTCTTGTTGAAGCTTCTAAATTCGCTAAGCTTTGGGTTCCA
TTCTGTAAAAAGTATAATGTTCAAATTAGAGCTCCCTTTAGATACTTCCC
AGATAGTGAGCCGTCCGATTCCAGTTCAGGGGAACTCCTGCAAGACTGGA
AAAACATGAAGAAAGAGTATGATAAACTTAGCCAAAACATAGAACATGCA
GCCAAAAGATCTTCTTTATTTGATCTAACAGGAGGAATGACTGTTTTCTN
NNATACAGAACGCATGAA
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