CK935028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 8.687e-28 Identity = 56/116 (48.28%), Postives = 75/116 (64.66%), Query Frame = 3 Query: 450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791 L VD+FV+T D EPP++T NTVLS+LAVDYPV K++CYVSDD S L F SL E ++FA+ WVPFCKK++++ RAP YF Q+ + MK+EY++ I Sbjct: 343 LSAVDLFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGASMLTFESLSETAEFARKWVPFCKKFSIEPRAPEFYFSQKVDYLKDKVHPNFVQERRAMKREYEEFKVRI 458 HSP 2 Score: 33.4982 bits (75), Expect = 8.687e-28 Identity = 15/38 (39.47%), Postives = 19/38 (50.00%), Query Frame = 1 Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 W + +CE F WIL KW P+ +TY RL R Sbjct: 296 WLTSIICEIWFAVSWILDQFPKWYPIDRETYLDRLSLR 333
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA5_ARATH (Cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Arabidopsis thaliana GN=CESA5 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.578e-27 Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698 EL VD+FV+T D EPP+IT NTVLS+LAVDYPV ++ACYVSDD + L F +L E ++FA+ WVPFCKKY ++ RAP YF Sbjct: 339 ELAGVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDRVACYVSDDGAAMLTFEALSETAEFARKWVPFCKKYTIEPRAPEWYF 422 HSP 2 Score: 33.8834 bits (76), Expect = 1.578e-27 Identity = 14/38 (36.84%), Postives = 20/38 (52.63%), Query Frame = 1 Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 W ++ +CE F W+L KW P+ +TY RL R Sbjct: 293 WLISVICEIWFAVSWVLDQFPKWYPIERETYLDRLSLR 330 HSP 3 Score: 20.4014 bits (41), Expect = 1.578e-27 Identity = 11/45 (24.44%), Postives = 21/45 (46.67%), Query Frame = 2 Query: 2 GTSINAETPKIKKTSTCFSSSWPIQSRHVSLYTKKFFIKTHIIGL 136 G +A+ P + + S PI+S ++ Y ++ I+GL Sbjct: 232 GDGDDADIPMMDEGRQPLSRKVPIKSSKINPYRMLIVLRLVILGL 276
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.915e-27 Identity = 57/132 (43.18%), Postives = 85/132 (64.39%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI----EHAAKRSSLFD 824 +LP +D+FV+TAD E EPP++T NT+LS+LAVDYPV K++CY+SDD + L+F ++ EA+ FA LWVPFC+K+N++ R P YF +D + +K+EYD+ I + +RS F+ Sbjct: 352 DLPGIDLFVSTADPEKEPPLVTANTILSILAVDYPVEKVSCYLSDDGGALLSFEAMAEAASFADLWVPFCRKHNIEPRNPDSYFSLKIDPTKNKSRIDFVKDRRKIKREYDEFKVRINGLPDSIRRRSDAFN 483 HSP 2 Score: 26.9498 bits (58), Expect = 1.915e-27 Identity = 12/38 (31.58%), Postives = 20/38 (52.63%), Query Frame = 1 Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 W ++ +CE F F WIL K P+ T + L+++ Sbjct: 301 WLMSIICELWFGFSWILDQIPKLCPINRSTDLEVLRDK 338
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.915e-27 Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698 EL PVD+FV+T D EPP+IT NTVLS+LAVDYPV K+ACYVSDD + L F +L ++FA+ WVPFCKK++++ RAP YF Sbjct: 357 ELAPVDVFVSTVDPLKEPPLITANTVLSILAVDYPVEKVACYVSDDGAAMLTFEALSYTAEFARKWVPFCKKFSIEPRAPEWYF 440 HSP 2 Score: 33.113 bits (74), Expect = 1.915e-27 Identity = 15/38 (39.47%), Postives = 19/38 (50.00%), Query Frame = 1 Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 W + +CE F WIL KW P+ +TY RL R Sbjct: 311 WLTSVICEIWFAVSWILDQFPKWYPIERETYLDRLSLR 348
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD3_ARATH (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana GN=CSLD3 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.672e-26 Identity = 56/117 (47.86%), Postives = 77/117 (65.81%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791 +LP +DMFV+TAD E EPP++T NT+LS+LA DYPV KLACYVSDD + L F ++ EA+ FA +WVPFC+K+N++ R P YF +D + +K+EYD+ I Sbjct: 374 DLPGLDMFVSTADPEKEPPLVTSNTILSILAADYPVEKLACYVSDDGGALLTFEAMAEAASFANMWVPFCRKHNIEPRNPDSYFSLKRDPYKNKVKADFVKDRRRVKREYDEFKVRI 490 HSP 2 Score: 22.7126 bits (47), Expect = 2.672e-26 Identity = 11/38 (28.95%), Postives = 18/38 (47.37%), Query Frame = 1 Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 W ++ +CE F W+L K P+ T L+E+ Sbjct: 323 WGMSVVCELWFALSWLLDQLPKLCPINRATDLNVLKEK 360
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLE2_ORYSJ (Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.500e-26 Identity = 54/115 (46.96%), Postives = 72/115 (62.61%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791 ELP VD+FV TAD EPP++ ++TVLS++A DY KL Y+SDDA S L FY L EAS+FAK W+PFCKKY V+ R+P YF ++W MK+ Y ++ + Sbjct: 110 ELPSVDIFVCTADPTAEPPMLVISTVLSVMAYDYLPEKLNIYLSDDAGSVLTFYVLCEASEFAKHWIPFCKKYKVEPRSPAAYF--AKVASPPDGCGPKEWFTMKELYKDMTDRV 222 HSP 2 Score: 32.7278 bits (73), Expect = 3.500e-26 Identity = 12/39 (30.77%), Postives = 21/39 (53.85%), Query Frame = 1 Query: 208 FAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQE 324 +AW E F F W+L ++ +W P+ +T+ RL + Sbjct: 66 WAWLGMLAAELWFGFYWVLTLSVRWCPVYRRTFKDRLAQ 104
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLE1_ARATH (Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.557e-26 Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRY 695 +LP +D+FV TAD +EPP++ VNTVLS+ A+DYP KLA Y+SDD S L FY+L EA++FAK WVPFCKK+NV+ +P Y Sbjct: 107 DLPRLDVFVCTADPVIEPPLLVVNTVLSVTALDYPPEKLAVYLSDDGGSELTFYALTEAAEFAKTWVPFCKKFNVEPTSPAAY 189 HSP 2 Score: 31.187 bits (69), Expect = 4.557e-26 Identity = 11/38 (28.95%), Postives = 19/38 (50.00%), Query Frame = 1 Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 WF+ F+ E F W++ + +W P+ + RL R Sbjct: 66 WFVMFIVEIWFGLYWVVTQSSRWNPVWRFPFSDRLSRR 103
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLE1_ORYSJ (Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.702e-25 Identity = 51/119 (42.86%), Postives = 77/119 (64.71%), Query Frame = 3 Query: 444 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHA 800 Q LP VD+FV TAD + EPP + ++T+LS++A +YP K++ Y+SDD S L FY+L EAS FAK W+PFCK+YN++ R+P YF ++W +K Y+++ + I+ A Sbjct: 100 QNLPGVDIFVCTADPQSEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASIFAKKWLPFCKRYNIEPRSPAAYF--SESKVHHNLCIPKEWALIKNLYEEMRERIDTA 216 HSP 2 Score: 30.4166 bits (67), Expect = 1.702e-25 Identity = 12/39 (30.77%), Postives = 18/39 (46.15%), Query Frame = 1 Query: 211 AWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 AW E F W++ + +W P +T+ RL ER Sbjct: 59 AWLGMAAAELWFAVYWVIAQSVRWRPFRRRTFRDRLAER 97
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD5_ARATH (Cellulose synthase-like protein D5 OS=Arabidopsis thaliana GN=CSLD5 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.068e-24 Identity = 56/133 (42.11%), Postives = 83/133 (62.41%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI----EHAAKRSSLFDL 827 +LP +D+FV+TAD E EPP++T NT+LS+LAVDYPV KLACY+SDD + L F +L + + FA WVPFC+K+N++ R P YF ++ + +K+EYD+ I E +RS +++ Sbjct: 398 DLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKLACYLSDDGGALLTFEALAQTASFASTWVPFCRKHNIEPRNPEAYFGQKRNFLKNKVRLDFVRERRRVKREYDEFKVRINSLPEAIRRRSDAYNV 530 HSP 2 Score: 21.1718 bits (43), Expect = 1.068e-24 Identity = 12/38 (31.58%), Postives = 17/38 (44.74%), Query Frame = 1 Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 W ++ CE F W+L K P+ T L+ER Sbjct: 347 WGMSTTCELWFALSWLLDQLPKLCPVNRLTDLGVLKER 384
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.069e-24 Identity = 56/132 (42.42%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI----EHAAKRSSLFD 824 +LP +D+FV+TAD E EP + T T+LS+LAVDYPV KLACYVSDD + L F ++ EA+ FA +WVPFCKK++++ R P YF +D + +K+E+D+ I + +RS F+ Sbjct: 377 DLPGLDVFVSTADPEKEPVLTTATTILSILAVDYPVEKLACYVSDDGGALLTFEAMAEAASFANVWVPFCKKHDIEPRNPDSYFSVKGDPTKGKRRNDFVKDRRRVKREFDEFKVRINGLPDSIRRRSDAFN 508 HSP 2 Score: 26.1794 bits (56), Expect = 1.069e-24 Identity = 12/38 (31.58%), Postives = 20/38 (52.63%), Query Frame = 1 Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 W ++ +CE F F W+L + K P+ T L+E+ Sbjct: 326 WGMSIVCELWFAFSWLLDMLPKVNPVNRSTDLAVLKEK 363 The following BLAST results are available for this feature:
BLAST of CK935028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935028 ID=CK935028; Name=CK935028; organism=Citrus sinensis; type=EST; length=868bpback to top |