CK935028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSJ (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. japonica GN=CSLD2 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.455e-24 Identity = 54/121 (44.63%), Postives = 78/121 (64.46%), Query Frame = 3 Query: 435 NRIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791 N +LP +D+FV+TAD E EPP++T NT+LS+LA DYPV KL+CYVSDD + L F ++ EA+ FA +WVPFC+K++++ R P YF +D + +K+EYD+ I Sbjct: 392 NGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRSDFVKDRRRVKREYDEFKVRI 512
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD2_ORYSI (Cellulose synthase-like protein D2 OS=Oryza sativa subsp. indica GN=CSLD2 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.455e-24 Identity = 54/121 (44.63%), Postives = 78/121 (64.46%), Query Frame = 3 Query: 435 NRIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791 N +LP +D+FV+TAD E EPP++T NT+LS+LA DYPV KL+CYVSDD + L F ++ EA+ FA +WVPFC+K++++ R P YF +D + +K+EYD+ I Sbjct: 392 NGRSDLPGLDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRSDFVKDRRRVKREYDEFKVRI 512
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.988e-24 Identity = 50/117 (42.74%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791 +LP D+FV+TAD E EPP++T NT+LS+LA +YPV KL+CYVSDD + L F ++ EA+ FA +WVPFC+K+ ++ R P YF +D + +K+E+D+ + Sbjct: 377 DLPGFDVFVSTADPEKEPPLVTANTILSILAAEYPVEKLSCYVSDDGGALLTFEAMAEAASFANIWVPFCRKHAIEPRNPDSYFSLKRDPYKNKVKSDFVKDRRRVKREFDEFKVRV 493 HSP 2 Score: 24.6386 bits (52), Expect = 3.988e-24 Identity = 12/38 (31.58%), Postives = 19/38 (50.00%), Query Frame = 1 Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 W ++ +CE F W+L K P+ T Q L+E+ Sbjct: 326 WGMSVVCELWFALSWLLDQLPKLCPINRATDLQVLKEK 363
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD4_ORYSJ (Cellulose synthase-like protein D4 OS=Oryza sativa subsp. japonica GN=CSLD4 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.232e-24 Identity = 52/117 (44.44%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791 +LP +D+FVT+AD E EPP++T NT+LS+LA DYPV KLACY+SDD + L+F +L E + FA+ WVPFC+K+ V+ R P YF ++ + +K+EYD+ + Sbjct: 407 DLPGIDVFVTSADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLSFEALAETASFARTWVPFCRKHGVEPRCPEAYFGQKRDFLKNKVRVDFVRERRKVKREYDEFKVRV 523
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSJ (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. japonica GN=CSLD1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.219e-24 Identity = 53/117 (45.30%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791 +LP +D+FV+TAD E EP ++T NT+LS+LA DYPV KLACYVSDD + L F ++ EA+ FA LWVPFC+K+ ++ R P YF +D + +K+EYD+ + Sbjct: 347 DLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRV 463
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD1_ORYSI (Cellulose synthase-like protein D1 OS=Oryza sativa subsp. indica GN=CSLD1 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 7.219e-24 Identity = 53/117 (45.30%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI 791 +LP +D+FV+TAD E EP ++T NT+LS+LA DYPV KLACYVSDD + L F ++ EA+ FA LWVPFC+K+ ++ R P YF +D + +K+EYD+ + Sbjct: 347 DLPGIDIFVSTADPEKEPVLVTANTILSILAADYPVDKLACYVSDDGGALLTFEAMAEAASFANLWVPFCRKHEIEPRNPDSYFNLKRDPFKNKVKGDFVKDRRRVKREYDEFKVRV 463
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD6_ARATH (Putative cellulose synthase-like protein D6 OS=Arabidopsis thaliana GN=CSLD6 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23 Identity = 47/84 (55.95%), Postives = 67/84 (79.76%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698 +LP +D+FV+TADAE EPP++T NT+LS+L+VDYPV KL+ Y+SDD S + F ++ EA+ FAK+WVPFC+K+ ++ R P YF Sbjct: 202 DLPGIDVFVSTADAEKEPPLVTANTILSILSVDYPVEKLSVYISDDGGSLVTFEAIAEAASFAKIWVPFCRKHKIEPRNPESYF 285
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.231e-23 Identity = 56/133 (42.11%), Postives = 84/133 (63.16%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI----EHAAKRSSLFDL 827 +LP VD+FV+TAD E EPP++T NT+LS+LAVDYP+ KL+ Y+SDD + L F ++ EA +FA+ WVPFC+K++++ R P YF +D + +K+EYD+ I E KR+ F++ Sbjct: 263 DLPGVDVFVSTADPEKEPPLVTANTLLSILAVDYPIEKLSAYISDDGGAILTFEAMAEAVRFAEYWVPFCRKHDIEPRNPDSYFSIKKDPTKNKKRQDFVKDRRWIKREYDEFKVRINGLPEQIKKRAEQFNM 395
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLE6_ORYSJ (Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.982e-23 Identity = 57/149 (38.26%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 369 FAIVFVILQVXXXXXXXXCVRLNRIQE-----LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHA 800 FA+ +VI Q NR+ E LP VD+FV TAD EPP + ++T+LS++A +YP K++ Y+SDD S L FY+L EAS FAK W+PFC++YN++ R+P YF ++W +K Y+++ + I+ A Sbjct: 65 FAVYWVITQSVRWCPVRRRTFKNRLAERYKENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYLSDDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYF--SESEGHHNLCSPKEWSFIKNLYEEMRERIDSA 211
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CESAB_ORYSJ (Putative cellulose synthase A catalytic subunit 11 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA11 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.597e-22 Identity = 54/123 (43.90%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRS 812 L VD+FV ADA EPP+ T NTVLS+LA DYP +ACYV DD L F SL EA+ FA+ W+PFC+++ V+ RAP YF +D + MK+EY++ + H A R+ Sbjct: 124 LAGVDVFVAAADAAREPPLATANTVLSVLAADYPAGGVACYVHDDGADMLVFESLFEAAGFARRWIPFCRRHGVEPRAPELYFARGVDYLRDRAAPSFVKDRRAMKREYEEFKVRMNHLAARA 246 HSP 2 Score: 23.0978 bits (48), Expect = 1.597e-22 Identity = 11/38 (28.95%), Postives = 15/38 (39.47%), Query Frame = 1 Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 W + CE W++ K +P TY RL R Sbjct: 77 WVTSVACELWLAASWLIAQLPKLSPANRVTYLDRLASR 114 The following BLAST results are available for this feature:
BLAST of CK935028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935028 ID=CK935028; Name=CK935028; organism=Citrus sinensis; type=EST; length=868bpback to top |