CK935028

Overview
NameCK935028
Unique NameCK935028
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.778e-22
Identity = 50/121 (41.32%), Postives = 76/121 (62.81%), Query Frame = 3
Query:  444 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAK 806
            ++ P +D+F+ TAD   EPP++ VNT LS++A +YP  K++ YVSDD  S L F++L+EA+KF+K W+PFCKK NVQ R+P  YF               + +N+K  Y+ +   +EH  +
Sbjct:   96 EDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTFFALIEAAKFSKQWLPFCKKNNVQDRSPEVYF------SSESHSRSDEAENLKMMYEDMKSRVEHVVE 210          
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22
Identity = 49/121 (40.50%), Postives = 75/121 (61.98%), Query Frame = 3
Query:  444 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAK 806
            ++ P +D+F+ TAD   EPP++ VNT LS++A +YP HK++ YVSDD  S L  ++L+EA+KF+K W+PFCK  NVQ R+P  YF               + +N+K  Y+ +   +EH  +
Sbjct:   93 EDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSHKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPEVYF------SSKSHSSSDEAENLKMMYEDMKSRVEHVVE 207          
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.505e-21
Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = 3
Query:  369 FAIVFVILQVXXXXXXXXCVRLNRIQE---LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698
            FA ++V+ Q+         V +  + +   LP +D+FVTTAD + EPP+ T NTVLS+LA  YP  K+ CYVSDDA + +   ++VEA++FA LWVPFC+K+ V+ R P  YF
Sbjct:  112 FAFMWVLDQLPKTMPVRRAVDVTALNDDTLLPAMDVFVTTADPDKEPPLATANTVLSILAAGYPAGKVTCYVSDDAGAEVTRGAVVEAARFAALWVPFCRKHGVEPRNPEAYF 224          
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.966e-21
Identity = 51/118 (43.22%), Postives = 76/118 (64.41%), Query Frame = 3
Query:  447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIE 794
            ELP VD+FVTT D   EP + TVN++LS+LA DYPV + ACY+SDD  + +++ ++VE +KFA+LWVPFC+K+ V+ RAP  YF                 D + +++EY++    I+
Sbjct:  174 ELPGVDVFVTTVDPVDEPILYTVNSILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRAPESYFAMKTQAYRGGVAGELMSDRRRVRREYEEFKVRID 291          
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.966e-21
Identity = 50/118 (42.37%), Postives = 76/118 (64.41%), Query Frame = 3
Query:  447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIE 794
            +LP VD+FVTT D   EP + TVNT+LS+LA DYPV + ACY+SDD  + +++ ++VE +KFA+LWVPFC+K+ V+ R+P  YF                 D + +++EY++    I+
Sbjct:  168 DLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHRRVRREYEEFKVRID 285          
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.966e-21
Identity = 50/118 (42.37%), Postives = 76/118 (64.41%), Query Frame = 3
Query:  447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIE 794
            +LP VD+FVTT D   EP + TVNT+LS+LA DYPV + ACY+SDD  + +++ ++VE +KFA+LWVPFC+K+ V+ R+P  YF                 D + +++EY++    I+
Sbjct:  138 DLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHRRVRREYEEFKVRID 255          
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.211e-21
Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = 3
Query:  447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDK 776
            +LP +D+F++TAD   EP ++T NT+LS+LA +YPV KL  Y+SDD  + L F S+ EA  FAK+WVPFC+K++++ R P  YF                +D + +K+EYD+
Sbjct:  235 DLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPDFVKDRRWIKREYDE 346          

HSP 2 Score: 24.6386 bits (52), Expect = 2.211e-21
Identity = 11/38 (28.95%), Postives = 18/38 (47.37%), Query Frame = 1
Query:  214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
            W ++ +CE  F F W+L    K  P+        L+E+
Sbjct:  184 WGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEK 221          
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.211e-21
Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = 3
Query:  447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDK 776
            +LP +D+F++TAD   EP ++T NT+LS+LA +YPV KL  Y+SDD  + L F S+ EA  FAK+WVPFC+K++++ R P  YF                +D + +K+EYD+
Sbjct:  235 DLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPDFVKDRRWIKREYDE 346          

HSP 2 Score: 24.6386 bits (52), Expect = 2.211e-21
Identity = 11/38 (28.95%), Postives = 18/38 (47.37%), Query Frame = 1
Query:  214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327
            W ++ +CE  F F W+L    K  P+        L+E+
Sbjct:  184 WGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEK 221          
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 49/121 (40.50%), Postives = 75/121 (61.98%), Query Frame = 3
Query:  444 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAK 806
            ++ P +D+F+ TAD   EPP++ VNT LS++A +YP  K++ YVSDD  S L  ++L+EA+KF+K W+PFCKK NVQ R+P  YF               + +N+K  Y+ +   +EH  +
Sbjct:  115 EDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKKNNVQDRSPEVYF------SSKLRSRSDEAENIKMMYEDMKSRVEHVVE 229          
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.274e-20
Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = 3
Query:  450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIE 794
            LP +D+F+ T D   EP I T+N +LS+LA DYPV K ACY+SDD  S +++  L+E +KFA LWVPFC+K++++ RAP  YF                 D + M++EYD+    ++
Sbjct:  169 LPGLDVFINTVDPINEPMIYTMNAILSILAADYPVDKHACYLSDDGGSIIHYDGLLETAKFAALWVPFCRKHSIEPRAPESYFAVKSRPYAGSAPEDFLSDHRYMRREYDEFKVRLD 285          
The following BLAST results are available for this feature:
BLAST of CK935028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CSLG1_ARATH1.778e-2241.32Cellulose synthase-like protein G1 OS=Arabidopsis ... [more]
CSLG2_ARATH6.757e-2240.50Cellulose synthase-like protein G2 OS=Arabidopsis ... [more]
CSLF7_ORYSJ1.505e-2146.02Probable mixed-linked glucan synthase 7 OS=Oryza s... [more]
CSLF4_ORYSJ1.966e-2143.22Mixed-linked glucan synthase 4 OS=Oryza sativa sub... [more]
CSLF2_ORYSJ1.966e-2142.37Mixed-linked glucan synthase 2 OS=Oryza sativa sub... [more]
CSLF1_ORYSJ1.966e-2142.37Putative mixed-linked glucan synthase 1 OS=Oryza s... [more]
CSLD5_ORYSJ2.211e-2142.86Cellulose synthase-like protein D5 OS=Oryza sativa... [more]
CSLD5_ORYSI2.211e-2142.86Putative cellulose synthase-like protein D5 OS=Ory... [more]
CSLG3_ARATH2.568e-2140.50Cellulose synthase-like protein G3 OS=Arabidopsis ... [more]
CSLF8_ORYSJ1.274e-2041.88Probable mixed-linked glucan synthase 8 OS=Oryza s... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004222_H04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10003_IF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK935028 ID=CK935028; Name=CK935028; organism=Citrus sinensis; type=EST; length=868bp
GGGGACATCTATTAATGCCGAAACACCAAAAATAAAAAAAACGAGTACTT
GTTTTTCAAGCTCATGGCCAATACAAAGTCGTCATGTCTCCCTCTATACG
AAAAAGTTTTTCATAAAAACACATATCATAGGGCTTTAGATGTTATCATC
TTGTTCCTTCTTCTATGTCTGCTCTTCTATCGGCTCTCAACGTTGAAGAA
TCATGGATTTGCTTGGTTTCTTGCTTTTCTATGTGAGTCTTGTTTTACTT
TCATCTGGATTCTCATCGTCAACTGCAAGTGGACTCCTTTGACCTACAAA
ACATATCCCCAACGTCTCCAAGAAAGGTAACAAATCAAATAACGTTAGCA
TTAATAATTTCCGCATCATTTGCAATTGTCTTTGTCATTTTGCAAGTTAC
TACACACACACACACACACACATGTGTACGACTCAACAGGATACAGGAGC
TGCCCCCAGTGGACATGTTTGTGACAACTGCTGATGCTGAACTCGAGCCG
CCAATCATCACTGTAAACACAGTGCTGTCTTTGTTGGCAGTTGATTATCC
AGTTCACAAGCTCGCTTGCTATGTTTCTGATGATGCCTGCTCACCTCTCA
ATTTCTACTCTCTTGTTGAAGCTTCTAAATTCGCTAAGCTTTGGGTTCCA
TTCTGTAAAAAGTATAATGTTCAAATTAGAGCTCCCTTTAGATACTTCCC
AGATAGTGAGCCGTCCGATTCCAGTTCAGGGGAACTCCTGCAAGACTGGA
AAAACATGAAGAAAGAGTATGATAAACTTAGCCAAAACATAGAACATGCA
GCCAAAAGATCTTCTTTATTTGATCTAACAGGAGGAATGACTGTTTTCTN
NNATACAGAACGCATGAA
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