CK935028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.778e-22 Identity = 50/121 (41.32%), Postives = 76/121 (62.81%), Query Frame = 3 Query: 444 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAK 806 ++ P +D+F+ TAD EPP++ VNT LS++A +YP K++ YVSDD S L F++L+EA+KF+K W+PFCKK NVQ R+P YF + +N+K Y+ + +EH + Sbjct: 96 EDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTFFALIEAAKFSKQWLPFCKKNNVQDRSPEVYF------SSESHSRSDEAENLKMMYEDMKSRVEHVVE 210
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLG2_ARATH (Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22 Identity = 49/121 (40.50%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 444 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAK 806 ++ P +D+F+ TAD EPP++ VNT LS++A +YP HK++ YVSDD S L ++L+EA+KF+K W+PFCK NVQ R+P YF + +N+K Y+ + +EH + Sbjct: 93 EDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSHKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPEVYF------SSKSHSSSDEAENLKMMYEDMKSRVEHVVE 207
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.505e-21 Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = 3 Query: 369 FAIVFVILQVXXXXXXXXCVRLNRIQE---LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698 FA ++V+ Q+ V + + + LP +D+FVTTAD + EPP+ T NTVLS+LA YP K+ CYVSDDA + + ++VEA++FA LWVPFC+K+ V+ R P YF Sbjct: 112 FAFMWVLDQLPKTMPVRRAVDVTALNDDTLLPAMDVFVTTADPDKEPPLATANTVLSILAAGYPAGKVTCYVSDDAGAEVTRGAVVEAARFAALWVPFCRKHGVEPRNPEAYF 224
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.966e-21 Identity = 51/118 (43.22%), Postives = 76/118 (64.41%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIE 794 ELP VD+FVTT D EP + TVN++LS+LA DYPV + ACY+SDD + +++ ++VE +KFA+LWVPFC+K+ V+ RAP YF D + +++EY++ I+ Sbjct: 174 ELPGVDVFVTTVDPVDEPILYTVNSILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRAPESYFAMKTQAYRGGVAGELMSDRRRVRREYEEFKVRID 291
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.966e-21 Identity = 50/118 (42.37%), Postives = 76/118 (64.41%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIE 794 +LP VD+FVTT D EP + TVNT+LS+LA DYPV + ACY+SDD + +++ ++VE +KFA+LWVPFC+K+ V+ R+P YF D + +++EY++ I+ Sbjct: 168 DLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHRRVRREYEEFKVRID 285
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.966e-21 Identity = 50/118 (42.37%), Postives = 76/118 (64.41%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIE 794 +LP VD+FVTT D EP + TVNT+LS+LA DYPV + ACY+SDD + +++ ++VE +KFA+LWVPFC+K+ V+ R+P YF D + +++EY++ I+ Sbjct: 138 DLPGVDVFVTTVDPVDEPILYTVNTILSILAADYPVDRYACYLSDDGGTLVHYEAMVEVAKFAELWVPFCRKHCVEPRSPENYFAMKTQAYKGGVPGELMSDHRRVRREYEEFKVRID 255
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.211e-21 Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDK 776 +LP +D+F++TAD EP ++T NT+LS+LA +YPV KL Y+SDD + L F S+ EA FAK+WVPFC+K++++ R P YF +D + +K+EYD+ Sbjct: 235 DLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPDFVKDRRWIKREYDE 346 HSP 2 Score: 24.6386 bits (52), Expect = 2.211e-21 Identity = 11/38 (28.95%), Postives = 18/38 (47.37%), Query Frame = 1 Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 W ++ +CE F F W+L K P+ L+E+ Sbjct: 184 WGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEK 221
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.211e-21 Identity = 48/112 (42.86%), Postives = 72/112 (64.29%), Query Frame = 3 Query: 447 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDK 776 +LP +D+F++TAD EP ++T NT+LS+LA +YPV KL Y+SDD + L F S+ EA FAK+WVPFC+K++++ R P YF +D + +K+EYD+ Sbjct: 235 DLPGLDVFISTADPYKEPTLVTANTLLSILATEYPVEKLFVYISDDGGALLTFESMAEACAFAKVWVPFCRKHSIEPRNPDSYFTQKGDPTKGKKRPDFVKDRRWIKREYDE 346 HSP 2 Score: 24.6386 bits (52), Expect = 2.211e-21 Identity = 11/38 (28.95%), Postives = 18/38 (47.37%), Query Frame = 1 Query: 214 WFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQER 327 W ++ +CE F F W+L K P+ L+E+ Sbjct: 184 WGISIVCEFWFAFSWLLDQMPKLNPINRAADLAALKEK 221
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21 Identity = 49/121 (40.50%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 444 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAK 806 ++ P +D+F+ TAD EPP++ VNT LS++A +YP K++ YVSDD S L ++L+EA+KF+K W+PFCKK NVQ R+P YF + +N+K Y+ + +EH + Sbjct: 115 EDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEYPSDKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKKNNVQDRSPEVYF------SSKLRSRSDEAENIKMMYEDMKSRVEHVVE 229
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.274e-20 Identity = 49/117 (41.88%), Postives = 72/117 (61.54%), Query Frame = 3 Query: 450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIE 794 LP +D+F+ T D EP I T+N +LS+LA DYPV K ACY+SDD S +++ L+E +KFA LWVPFC+K++++ RAP YF D + M++EYD+ ++ Sbjct: 169 LPGLDVFINTVDPINEPMIYTMNAILSILAADYPVDKHACYLSDDGGSIIHYDGLLETAKFAALWVPFCRKHSIEPRAPESYFAVKSRPYAGSAPEDFLSDHRYMRREYDEFKVRLD 285 The following BLAST results are available for this feature:
BLAST of CK935028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935028 ID=CK935028; Name=CK935028; organism=Citrus sinensis; type=EST; length=868bpback to top |