CK935028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF6_ORYSJ (Probable mixed-linked glucan synthase 6 OS=Oryza sativa subsp. japonica GN=CSLF6 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.174e-20 Identity = 55/136 (40.44%), Postives = 78/136 (57.35%), Query Frame = 3 Query: 450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF--XXXXXXXXXXXXXXQDWKNMKKEYDKLSQNI---EHAAK-RSSLFDLTGGM 839 LP +D+FVTTAD EP + T N++LS+LA DYPV + CY+SDD+ L + ++ EA+KFA LWVPFC+K+ ++ R P YF D + ++KEYD I EH K RS ++ G+ Sbjct: 183 LPGLDIFVTTADPIKEPILSTANSILSILAADYPVDRNTCYLSDDSGMLLTYEAMAEAAKFATLWVPFCRKHAIEPRGPESYFELKSHPYMGRAQEEFVNDRRRVRKEYDDFKARINGLEHDIKQRSDSYNAAAGV 318
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.079e-19 Identity = 45/83 (54.22%), Postives = 63/83 (75.90%), Query Frame = 3 Query: 450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698 LP +D+FVTTAD EP + T+N VLS+LA DYPV + ACY+SDD+ + + + +LVE +KFA LWVPFC+K+ ++ R+P YF Sbjct: 167 LPGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYF 249
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.079e-19 Identity = 45/83 (54.22%), Postives = 63/83 (75.90%), Query Frame = 3 Query: 450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698 LP +D+FVTTAD EP + T+N VLS+LA DYPV + ACY+SDD+ + + + +LVE +KFA LWVPFC+K+ ++ R+P YF Sbjct: 167 LPGIDVFVTTADPIDEPVLYTMNCVLSILAADYPVDRSACYLSDDSGALILYEALVETAKFATLWVPFCRKHCIEPRSPESYF 249
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLH3_ORYSJ (Putative cellulose synthase-like protein H3 OS=Oryza sativa subsp. japonica GN=CSLH3 PE=3 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 2.403e-19 Identity = 46/102 (45.10%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 558 KLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFXXXXXXXXXXXXXXQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFXXTER 863 +LACYVSDD CSP+ +Y+L EA+ FA+ WVPFC+++ V +RAPFRYF DW MK EYDKL + IE A + + L G F +R Sbjct: 173 RLACYVSDDGCSPVTYYALREAAGFARTWVPFCRRHGVAVRAPFRYFASAPEFGPADRKFLDDWTFMKSEYDKLVRRIEDADETTLLRQGGGEFAEFMDAKR 274
BLAST of CK935028 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.532e-18 Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 3 Query: 450 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 698 LP +D+F+ T D EP + T+N++LS+LA DYP + A Y+SDD S ++ L+E ++FA LWVPFC+K+ V+ RAP YF Sbjct: 151 LPGIDVFINTVDPVDEPMLYTMNSILSILATDYPADRHAAYLSDDGASLAHYEGLIETARFAALWVPFCRKHRVEPRAPESYF 233 The following BLAST results are available for this feature:
BLAST of CK935028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CK935028 ID=CK935028; Name=CK935028; organism=Citrus sinensis; type=EST; length=868bpback to top |